SCOPe 2.01: Family b.29.1.11: Xylanase/endoglucanase 11/12

Lineage for Family b.29.1.11: Xylanase/endoglucanase 11/12

1. Root: SCOPe 2.01

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
   sandwich; 12-14 strands in 2 sheets; complex topology

4. Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families)

5. Family b.29.1.11: Xylanase/endoglucanase 11/12 [49978] (3 proteins)

Proteins:

1. Family 12 endo-1,4-beta-glucanase (cellulase) catalytic domain [49991] (7 species)

   1. Species Aspergillus niger [TaxId:5061] [82041] (2 PDB entries)

   2. Species Humicola grisea [TaxId:5527] [101655] (5 PDB entries)
      Uniprot Q8NJY3 31-254

   3. Species Hypocrea schweinitzii [TaxId:36924] [89276] (1 PDB entry)

   4. Species Rhodothermus marinus [TaxId:29549] [89275] (4 PDB entries)

   5. Species Streptomyces lividans, CelB2 [TaxId:1916] [49992] (2 PDB entries)

   6. Species Streptomyces sp. 11ag8 [TaxId:133452] [89274] (1 PDB entry)

   7. Species Trichoderma reesei, Cel12A [TaxId:51453] [63731] (3 PDB entries)

2. Xylanase II [49979] (17 species)
   Partial overlap with common fold and the active sites of the other endoglucanases

   1. Species Aspergillus kawachii [TaxId:40384] [49988] (4 PDB entries)
      Uniprot P55328 29-210 # 100% sequence identity; Aspergillus awamori TaxID: 105351

   2. Species Aspergillus niger [TaxId:5061] [49987] (1 PDB entry)

   3. Species Bacillus agaradhaerens [TaxId:76935] [49982] (4 PDB entries)

   4. Species Bacillus circulans [TaxId:1397] [49980] (11 PDB entries)

   5. Species Bacillus subtilis [TaxId:1423] [49981] (3 PDB entries)

   6. Species Bacillus subtilis, B230 [TaxId:1423] [74910] (1 PDB entry)

   7. Species Chaetomium thermophilum [TaxId:209285] [89272] (1 PDB entry)
      endoxylanase 11a

   8. Species Dictyoglomus thermophilum [TaxId:14] [49990] (1 PDB entry)

   9. Species Nonomuraea flexuosa [TaxId:103836] [89273] (1 PDB entry)

   10. Species Paecilomyces variotii, Bainier 1907 [TaxId:45996] [49989] (1 PDB entry)

   11. Species Penicillium funiculosum [TaxId:28572] [110142] (1 PDB entry)
       Uniprot Q9HFH0

   12. Species Streptomyces sp. s38, xyl1 [TaxId:181109] [69240] (1 PDB entry)

   13. Species Thermomyces lanuginosus [TaxId:5541] [49986] (1 PDB entry)

   14. Species Trichoderma harzianum [TaxId:5544] [49983] (1 PDB entry)

   15. Species Trichoderma longibrachiatum [TaxId:5548] [158986] (6 PDB entries)

   16. Species Trichoderma reesei, xynI [TaxId:51453] [49984] (1 PDB entry)

   17. Species Trichoderma reesei, xynII [TaxId:51453] [49985] (11 PDB entries)

3. automated matches [190135] (3 species)
   not a true protein

   1. Species Bacillus sp. [TaxId:1409] [188250] (1 PDB entry)

   2. Species Chaetomium thermophilum [TaxId:209285] [186858] (1 PDB entry)

   3. Species Rhodothermus marinus [TaxId:29549] [188274] (1 PDB entry)

More info for Family b.29.1.11: Xylanase/endoglucanase 11/12

Timeline for Family b.29.1.11: Xylanase/endoglucanase 11/12:

• Family b.29.1.11: Xylanase/endoglucanase 11/12 first appeared (with stable ids) in SCOP 1.55, called Family b.29.1.11: Xylanase/endoglucanase 12
  
• Family b.29.1.11: Xylanase/endoglucanase 11/12 appears in SCOP 1.75
  
• Family b.29.1.11: Xylanase/endoglucanase 11/12 appears in SCOPe 2.02
  
• Family b.29.1.11: Xylanase/endoglucanase 11/12 appears in the current release, SCOPe 2.08