Lineage for Species: Human (Homo sapiens) [TaxId: 9606]

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2049732Fold b.29: Concanavalin A-like lectins/glucanases [49898] (1 superfamily)
    sandwich; 12-14 strands in 2 sheets; complex topology
  4. 2049733Superfamily b.29.1: Concanavalin A-like lectins/glucanases [49899] (26 families) (S)
  5. 2050921Family b.29.1.5: Pentraxin (pentaxin) [49951] (2 proteins)
    automatically mapped to Pfam PF00354
  6. 2051009Protein Serum amyloid P component (SAP) [49952] (1 species)
  7. 2051010Species Human (Homo sapiens) [TaxId:9606] [49953] (12 PDB entries)

PDB entries in Species: Human (Homo sapiens) [TaxId: 9606]:

  1. Domain(s) for 1gyk:
    1. 2051066Domain d1gyka_: 1gyk A: [83380]
      complexed with ca, cdg
    2. 2051067Domain d1gykb_: 1gyk B: [83381]
      complexed with ca, cdg
    3. 2051068Domain d1gykc_: 1gyk C: [83382]
      complexed with ca, cdg
    4. 2051069Domain d1gykd_: 1gyk D: [83383]
      complexed with ca, cdg
    5. 2051070Domain d1gyke_: 1gyk E: [83384]
      complexed with ca, cdg
  2. Domain(s) for 1lgn:
    1. 2051076Domain d1lgna_: 1lgn A: [24242]
      complexed with ca, da
    2. 2051077Domain d1lgnb_: 1lgn B: [24243]
      complexed with ca, da
    3. 2051078Domain d1lgnc_: 1lgn C: [24244]
      complexed with ca, da
    4. 2051079Domain d1lgnd_: 1lgn D: [24245]
      complexed with ca, da
    5. 2051080Domain d1lgne_: 1lgn E: [24246]
      complexed with ca, da
  3. Domain(s) for 1sac:
    1. 2051036Domain d1saca_: 1sac A: [24237]
      complexed with acy, ca
    2. 2051037Domain d1sacb_: 1sac B: [24238]
      complexed with acy, ca
    3. 2051038Domain d1sacc_: 1sac C: [24239]
      complexed with acy, ca
    4. 2051039Domain d1sacd_: 1sac D: [24240]
      complexed with acy, ca
    5. 2051040Domain d1sace_: 1sac E: [24241]
      complexed with acy, ca
  4. Domain(s) for 2a3w:
    1. 2051046Domain d2a3wa_: 2a3w A: [126099]
      automated match to d1gyka_
      complexed with ca, cpj
    2. 2051047Domain d2a3wb_: 2a3w B: [126100]
      automated match to d1gyka_
      complexed with ca, cpj
    3. 2051048Domain d2a3wc_: 2a3w C: [126101]
      automated match to d1gyka_
      complexed with ca, cpj
    4. 2051049Domain d2a3wd_: 2a3w D: [126102]
      automated match to d1gyka_
      complexed with ca, cpj
    5. 2051050Domain d2a3we_: 2a3w E: [126103]
      automated match to d1gyka_
      complexed with ca, cpj
    6. 2051051Domain d2a3wf_: 2a3w F: [126104]
      automated match to d1gyka_
      complexed with ca, cpj
    7. 2051052Domain d2a3wg_: 2a3w G: [126105]
      automated match to d1gyka_
      complexed with ca, cpj
    8. 2051053Domain d2a3wh_: 2a3w H: [126106]
      automated match to d1gyka_
      complexed with ca, cpj
    9. 2051054Domain d2a3wi_: 2a3w I: [126107]
      automated match to d1gyka_
      complexed with ca, cpj
    10. 2051055Domain d2a3wj_: 2a3w J: [126108]
      automated match to d1gyka_
      complexed with ca, cpj
    11. 2051056Domain d2a3wk_: 2a3w K: [126109]
      automated match to d1gyka_
      complexed with ca, cpj
    12. 2051057Domain d2a3wl_: 2a3w L: [126110]
      automated match to d1gyka_
      complexed with ca, cpj
    13. 2051058Domain d2a3wm_: 2a3w M: [126111]
      automated match to d1gyka_
      complexed with ca, cpj
    14. 2051059Domain d2a3wn_: 2a3w N: [126112]
      automated match to d1gyka_
      complexed with ca, cpj
    15. 2051060Domain d2a3wo_: 2a3w O: [126113]
      automated match to d1gyka_
      complexed with ca, cpj
    16. 2051061Domain d2a3wp_: 2a3w P: [126114]
      automated match to d1gyka_
      complexed with ca, cpj
    17. 2051062Domain d2a3wq_: 2a3w Q: [126115]
      automated match to d1gyka_
      complexed with ca, cpj
    18. 2051063Domain d2a3wr_: 2a3w R: [126116]
      automated match to d1gyka_
      complexed with ca, cpj
    19. 2051064Domain d2a3ws_: 2a3w S: [126117]
      automated match to d1gyka_
      complexed with ca, cpj
    20. 2051065Domain d2a3wt_: 2a3w T: [126118]
      automated match to d1gyka_
      complexed with ca, cpj
  5. Domain(s) for 2a3x:
    1. 2051081Domain d2a3xa_: 2a3x A: [126119]
      automated match to d4avsa_
      complexed with ca, cpk
    2. 2051082Domain d2a3xb_: 2a3x B: [126120]
      automated match to d4avsa_
      complexed with ca, cpk
    3. 2051083Domain d2a3xc_: 2a3x C: [126121]
      automated match to d4avsa_
      complexed with ca, cpk
    4. 2051084Domain d2a3xd_: 2a3x D: [126122]
      automated match to d4avsa_
      complexed with ca, cpk
    5. 2051085Domain d2a3xe_: 2a3x E: [126123]
      automated match to d4avsa_
      complexed with ca, cpk
    6. 2051086Domain d2a3xf_: 2a3x F: [126124]
      automated match to d4avsa_
      complexed with ca, cpk
    7. 2051087Domain d2a3xg_: 2a3x G: [126125]
      automated match to d4avsa_
      complexed with ca, cpk
    8. 2051088Domain d2a3xh_: 2a3x H: [126126]
      automated match to d4avsa_
      complexed with ca, cpk
    9. 2051089Domain d2a3xi_: 2a3x I: [126127]
      automated match to d4avsa_
      complexed with ca, cpk
    10. 2051090Domain d2a3xj_: 2a3x J: [126128]
      automated match to d4avsa_
      complexed with ca, cpk
  6. Domain(s) for 2a3y:
    1. 2051041Domain d2a3ya_: 2a3y A: [126129]
      automated match to d1gyka_
      complexed with ca, cpj
    2. 2051042Domain d2a3yb_: 2a3y B: [126130]
      automated match to d1gyka_
      complexed with ca, cpj
    3. 2051043Domain d2a3yc_: 2a3y C: [126131]
      automated match to d1gyka_
      complexed with ca, cpj
    4. 2051044Domain d2a3yd_: 2a3y D: [126132]
      automated match to d1gyka_
      complexed with ca, cpj
    5. 2051045Domain d2a3ye_: 2a3y E: [126133]
      automated match to d1gyka_
      complexed with ca, cpj
  7. Domain(s) for 2w08:
    1. 2051021Domain d2w08a_: 2w08 A: [168969]
      automated match to d1gyka_
      complexed with ca, nag, tpo
    2. 2051022Domain d2w08b_: 2w08 B: [168970]
      automated match to d1gyka_
      complexed with ca, nag, tpo
    3. 2051023Domain d2w08c_: 2w08 C: [168971]
      automated match to d1gyka_
      complexed with ca, nag, tpo
    4. 2051024Domain d2w08d_: 2w08 D: [168972]
      automated match to d1gyka_
      complexed with ca, nag, tpo
    5. 2051025Domain d2w08e_: 2w08 E: [168973]
      automated match to d1gyka_
      complexed with ca, nag, tpo
  8. Domain(s) for 3d5o:
    1. 2051071Domain d3d5oa_: 3d5o A: [173701]
      Other proteins in same PDB: d3d5of1, d3d5of2
      automated match to d1gyka_
      complexed with gol, nag, so4
    2. 2051072Domain d3d5ob_: 3d5o B: [173702]
      Other proteins in same PDB: d3d5of1, d3d5of2
      automated match to d1gyka_
      complexed with gol, nag, so4
    3. 2051073Domain d3d5oc_: 3d5o C: [173703]
      Other proteins in same PDB: d3d5of1, d3d5of2
      automated match to d1gyka_
      complexed with gol, nag, so4
    4. 2051074Domain d3d5od_: 3d5o D: [173704]
      Other proteins in same PDB: d3d5of1, d3d5of2
      automated match to d1gyka_
      complexed with gol, nag, so4
    5. 2051075Domain d3d5oe_: 3d5o E: [173705]
      Other proteins in same PDB: d3d5of1, d3d5of2
      automated match to d1gyka_
      complexed with gol, nag, so4
  9. Domain(s) for 3kqr:
    1. 2051011Domain d3kqra_: 3kqr A: [179569]
      automated match to d1gyka_
      complexed with ca, nag, ope
    2. 2051012Domain d3kqrb_: 3kqr B: [179570]
      automated match to d1gyka_
      complexed with ca, nag, ope
    3. 2051013Domain d3kqrc_: 3kqr C: [179571]
      automated match to d1gyka_
      complexed with ca, nag, ope
    4. 2051014Domain d3kqrd_: 3kqr D: [179572]
      automated match to d1gyka_
      complexed with ca, nag, ope
    5. 2051015Domain d3kqre_: 3kqr E: [179573]
      automated match to d1gyka_
      complexed with ca, nag, ope
  10. Domain(s) for 4avs:
    1. 2051016Domain d4avsa_: 4avs A: [197362]
      automated match to d3kqra_
      complexed with ca, n7p, nag
    2. 2051017Domain d4avsb_: 4avs B: [201529]
      automated match to d1saca_
      complexed with ca, n7p, nag
    3. 2051018Domain d4avsc_: 4avs C: [201530]
      automated match to d1saca_
      complexed with ca, n7p, nag
    4. 2051019Domain d4avsd_: 4avs D: [197363]
      automated match to d3kqra_
      complexed with ca, n7p, nag
    5. 2051020Domain d4avse_: 4avs E: [197364]
      automated match to d3kqra_
      complexed with ca, n7p, nag
  11. Domain(s) for 4avv:
    1. 2051031Domain d4avva_: 4avv A: [219168]
      automated match to d1saca_
      complexed with act, cd, ghe, nag, sia
    2. 2051032Domain d4avvb_: 4avv B: [219169]
      automated match to d1saca_
      complexed with act, cd, ghe, nag, sia
    3. 2051033Domain d4avvc_: 4avv C: [219170]
      automated match to d1saca_
      complexed with act, cd, ghe, nag, sia
    4. 2051034Domain d4avvd_: 4avv D: [219171]
      automated match to d1saca_
      complexed with act, cd, ghe, nag, sia
    5. 2051035Domain d4avve_: 4avv E: [219172]
      automated match to d1saca_
      complexed with act, cd, ghe, nag, sia
  12. Domain(s) for 4ayu:
    1. 2051026Domain d4ayua_: 4ayu A: [219214]
      automated match to d1saca_
      complexed with ca, gol, n8p, nag
    2. 2051027Domain d4ayub_: 4ayu B: [219215]
      automated match to d1saca_
      complexed with ca, gol, n8p, nag
    3. 2051028Domain d4ayuc_: 4ayu C: [219216]
      automated match to d1saca_
      complexed with ca, gol, n8p, nag
    4. 2051029Domain d4ayud_: 4ayu D: [219217]
      automated match to d1saca_
      complexed with ca, gol, n8p, nag
    5. 2051030Domain d4ayue_: 4ayu E: [219218]
      automated match to d1saca_
      complexed with ca, gol, n8p, nag

More info for Species Human (Homo sapiens) [TaxId:9606] from b.29.1.5 Serum amyloid P component (SAP)

Timeline for Species Human (Homo sapiens) [TaxId:9606] from b.29.1.5 Serum amyloid P component (SAP):