SCOPe 2.03: Protein: Adenovirus fiber protein "knob" domain

Lineage for Protein: Adenovirus fiber protein "knob" domain

Root: SCOPe 2.03
Class b: All beta proteins [48724] (174 folds)
Fold b.21: Virus attachment protein globular domain [49834] (1 superfamily)
sandwich, 10 strands in 2 sheets; greek-key
Superfamily b.21.1: Virus attachment protein globular domain [49835] (4 families)
Family b.21.1.1: Adenovirus fiber protein "knob" domain [49836] (2 proteins)
automatically mapped to Pfam PF00541
Protein Adenovirus fiber protein "knob" domain [49837] (8 species)

Species:

Canine adenovirus 2 [TaxId:10514] [158981] (1 PDB entry)
Uniprot Q65914 361-542

Domain for 2j1k:

Domain d2j1kc1: 2j1k C:361-542 [145610]
Other proteins in same PDB: d2j1ka_, d2j1kb_, d2j1kd_, d2j1ke_, d2j1kf_, d2j1kg_, d2j1kh_, d2j1ki_, d2j1kj_, d2j1kk_, d2j1kl_, d2j1km_, d2j1kn_, d2j1ko_, d2j1kp_, d2j1kq_, d2j1kr_, d2j1ks_, d2j1kt_, d2j1kv_, d2j1kx_, d2j1ky_, d2j1kz_

Human adenovirus 37 [TaxId:52275] [110136] (3 PDB entries)
Uniprot Q64823 182-365 ! Uniprot Q64823 181-365
1. Domains for 1uxa:
  1. Domain d1uxaa_: 1uxa A: [108091]
    complexed with act, zn
  2. Domain d1uxab_: 1uxa B: [108092]
    complexed with act, zn
  3. Domain d1uxac_: 1uxa C: [108093]
    complexed with act, zn
2. Domains for 1uxb:
  1. Domain d1uxba_: 1uxb A: [108094]
    complexed with act, zn
  2. Domain d1uxbb_: 1uxb B: [108095]
    complexed with act, zn
  3. Domain d1uxbc_: 1uxb C: [108096]
    complexed with act, zn
3. Domains for 1uxe:
  1. Domain d1uxea_: 1uxe A: [108097]
    complexed with act, zn
  2. Domain d1uxeb_: 1uxe B: [108098]
    complexed with act, zn
  3. Domain d1uxec_: 1uxe C: [108099]
    complexed with act, zn
Human adenovirus b [TaxId:108098] [226821] (1 PDB entry)
- Domain for 3exv:
  - Domain d3exva_: 3exv A: [209727]
    automated match to d3f0ya_
Human adenovirus type 11P [TaxId:343462] [158980] (1 PDB entry)
Uniprot P35774 129-325
- Domains for 2o39:
  1. Domain d2o39a1: 2o39 A:129-325 [145712]
    Other proteins in same PDB: d2o39c1, d2o39c2, d2o39d1, d2o39d2
    complexed with ca
  2. Domain d2o39b_: 2o39 B: [145713]
    Other proteins in same PDB: d2o39c1, d2o39c2, d2o39d1, d2o39d2
    automated match to d2o39a1
    complexed with ca
Human adenovirus type 12 [TaxId:28282] [49840] (4 PDB entries)
1. Domain for 1kac:
  - Domain d1kaca_: 1kac A: [23849]
    Other proteins in same PDB: d1kacb_
2. Domains for 1nob:
  1. Domain d1noba_: 1nob A: [23850]
  2. Domain d1nobb_: 1nob B: [23851]
  3. Domain d1nobc_: 1nob C: [23852]
  4. Domain d1nobd_: 1nob D: [23853]
  5. Domain d1nobe_: 1nob E: [23854]
  6. Domain d1nobf_: 1nob F: [23855]
3. Domain for 1p69:
  - Domain d1p69a_: 1p69 A: [94159]
    Other proteins in same PDB: d1p69b_
    mutant
4. Domain for 1p6a:
  - Domain d1p6aa_: 1p6a A: [94161]
    Other proteins in same PDB: d1p6ab_
    mutant
Human adenovirus type 2 [TaxId:10515] [49839] (2 PDB entries)
1. Domain for 1qhv:
  - Domain d1qhva_: 1qhv A: [23842]
    complexed with so4
2. Domains for 1qiu:
  1. Domain d1qiua1: 1qiu A:396-582 [23843]
    Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
  2. Domain d1qiub1: 1qiu B:396-582 [23844]
    Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
  3. Domain d1qiuc1: 1qiu C:396-582 [23845]
    Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
  4. Domain d1qiud1: 1qiu D:396-582 [23846]
    Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
  5. Domain d1qiue1: 1qiu E:396-582 [23847]
    Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
  6. Domain d1qiuf1: 1qiu F:396-582 [23848]
    Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
Human adenovirus type 3 [TaxId:45659] [63720] (1 PDB entry)
- Domains for 1h7z:
  1. Domain d1h7za_: 1h7z A: [60733]
    complexed with so4
  2. Domain d1h7zb_: 1h7z B: [60734]
    complexed with so4
  3. Domain d1h7zc_: 1h7z C: [60735]
    complexed with so4
Human adenovirus type 5 [TaxId:28285] [49838] (1 PDB entry)
- Domain for 1knb:
  - Domain d1knba_: 1knb A: [23841]

More info for Protein Adenovirus fiber protein "knob" domain from b.21.1.1: Adenovirus fiber protein "knob" domain

Timeline for Protein Adenovirus fiber protein "knob" domain from b.21.1.1: Adenovirus fiber protein "knob" domain:

Protein Adenovirus fiber protein "knob" domain from b.21.1.1: Adenovirus fiber protein "knob" domain first appeared (with stable ids) in SCOP 1.55, called Protein Adenovirus fiber protein head domain (knob domain) from b.21.1.1: Adenovirus fiber protein head domain (knob domain)
Protein Adenovirus fiber protein "knob" domain from b.21.1.1: Adenovirus fiber protein "knob" domain appears in SCOPe 2.02
Protein Adenovirus fiber protein "knob" domain from b.21.1.1: Adenovirus fiber protein "knob" domain appears in SCOPe 2.04
Protein Adenovirus fiber protein "knob" domain from b.21.1.1: Adenovirus fiber protein "knob" domain appears in the current release, SCOPe 2.08, called Protein Adenovirus fiber protein 'knob' domain from b.21.1.1: Adenovirus fiber protein 'knob' domain