Lineage for Protein: Adenovirus fiber protein "knob" domain

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2041113Fold b.21: Virus attachment protein globular domain [49834] (1 superfamily)
    sandwich, 10 strands in 2 sheets; greek-key
  4. 2041114Superfamily b.21.1: Virus attachment protein globular domain [49835] (4 families) (S)
  5. 2041115Family b.21.1.1: Adenovirus fiber protein "knob" domain [49836] (2 protein domains)
    automatically mapped to Pfam PF00541
  6. 2041116Protein Adenovirus fiber protein "knob" domain [49837] (12 species)

Species:

  1. 2041117Canine adenovirus 2 [TaxId:10514] [158981] (1 PDB entry)
    Uniprot Q65914 361-542
  2. 2041119Human adenovirus 16 [267755] (1 PDB entry)
  3. 2041126Human adenovirus 3 [TaxId:45659] [267964] (1 PDB entry)
  4. 2041129Human adenovirus 37 [TaxId:52275] [110136] (11 PDB entries)
    Uniprot Q64823 182-365 ! Uniprot Q64823 181-365
    1. Domains for 1uxa:
      1. 2041130Domain d1uxaa_: 1uxa A: [108091]
        complexed with act, zn
      2. 2041131Domain d1uxab_: 1uxa B: [108092]
        complexed with act, zn
      3. 2041132Domain d1uxac_: 1uxa C: [108093]
        complexed with act, zn
    2. Domains for 1uxb:
      1. 2041133Domain d1uxba_: 1uxb A: [108094]
        complexed with act, zn
      2. 2041134Domain d1uxbb_: 1uxb B: [108095]
        complexed with act, zn
      3. 2041135Domain d1uxbc_: 1uxb C: [108096]
        complexed with act, zn
    3. Domains for 1uxe:
      1. 2041151Domain d1uxea_: 1uxe A: [108097]
        complexed with act, zn
      2. 2041152Domain d1uxeb_: 1uxe B: [108098]
        complexed with act, zn
      3. 2041153Domain d1uxec_: 1uxe C: [108099]
        complexed with act, zn
    4. Domains for 3n0i:
      1. 2041139Domain d3n0ia_: 3n0i A: [181754]
        automated match to d1uxaa_
        complexed with zn
      2. 2041140Domain d3n0ib_: 3n0i B: [181755]
        automated match to d1uxaa_
        complexed with zn
      3. 2041141Domain d3n0ic_: 3n0i C: [181756]
        automated match to d1uxaa_
        complexed with zn
    5. Domains for 3qnd:
      1. 2041157Domain d3qnda_: 3qnd A: [184536]
        automated match to d1uxaa_
        complexed with sia, zn
      2. 2041158Domain d3qndb_: 3qnd B: [184537]
        automated match to d1uxaa_
        complexed with sia, zn
      3. 2041159Domain d3qndc_: 3qnd C: [184538]
        automated match to d1uxaa_
        complexed with sia, zn
      4. 2041160Domain d3qnde_: 3qnd E: [184539]
        automated match to d1uxaa_
        complexed with sia, zn
      5. 2041161Domain d3qndf_: 3qnd F: [184540]
        automated match to d1uxaa_
        complexed with sia, zn
      6. 2041162Domain d3qndg_: 3qnd G: [184541]
        automated match to d1uxaa_
        complexed with sia, zn
    6. Domains for 4k6t:
      1. 2041163Domain d4k6ta_: 4k6t A: [260484]
        automated match to d1uxaa_
        complexed with 1p0, act, ca, cl, edo, gol, mg, sia, zn
      2. 2041164Domain d4k6tb_: 4k6t B: [260485]
        automated match to d1uxaa_
        complexed with 1p0, act, ca, cl, edo, gol, mg, sia, zn
      3. 2041165Domain d4k6tc_: 4k6t C: [260486]
        automated match to d1uxaa_
        complexed with 1p0, act, ca, cl, edo, gol, mg, sia, zn
      4. 2041166Domain d4k6te_: 4k6t E: [260492]
        automated match to d1uxaa_
        complexed with 1p0, act, ca, cl, edo, gol, mg, sia, zn
      5. 2041167Domain d4k6tf_: 4k6t F: [260491]
        automated match to d1uxaa_
        complexed with 1p0, act, ca, cl, edo, gol, mg, sia, zn
      6. 2041168Domain d4k6tg_: 4k6t G: [260494]
        automated match to d1uxaa_
        complexed with 1p0, act, ca, cl, edo, gol, mg, sia, zn
    7. Domains for 4k6u:
      1. 2041154Domain d4k6ua_: 4k6u A: [260487]
        automated match to d1uxaa_
        complexed with 1p4, act, sia, zn
      2. 2041155Domain d4k6ub_: 4k6u B: [260490]
        automated match to d1uxaa_
        complexed with 1p4, act, sia, zn
      3. 2041156Domain d4k6uc_: 4k6u C: [260488]
        automated match to d1uxaa_
        complexed with 1p4, act, sia, zn
    8. Domains for 4k6v:
      1. 2041142Domain d4k6va_: 4k6v A: [260496]
        automated match to d1uxaa_
        complexed with 18d, 1p4, act, cl, na, zn
      2. 2041143Domain d4k6vb_: 4k6v B: [260497]
        automated match to d1uxaa_
        complexed with 18d, 1p4, act, cl, na, zn
      3. 2041144Domain d4k6vc_: 4k6v C: [260493]
        automated match to d1uxaa_
        complexed with 18d, 1p4, act, cl, na, zn
    9. Domains for 4k6w:
      1. 2041145Domain d4k6wa_: 4k6w A: [260495]
        automated match to d1uxaa_
        complexed with 18d, 1p0, act, edo, mg, zn
      2. 2041146Domain d4k6wb_: 4k6w B: [260489]
        automated match to d1uxaa_
        complexed with 18d, 1p0, act, edo, mg, zn
      3. 2041147Domain d4k6wc_: 4k6w C: [260498]
        automated match to d1uxaa_
        complexed with 18d, 1p0, act, edo, mg, zn
    10. Domains for 4xqa:
      1. 2041136Domain d4xqaa_: 4xqa A: [275499]
        automated match to d1uxaa_
        complexed with 423, act, zn
      2. 2041137Domain d4xqab_: 4xqa B: [275500]
        automated match to d1uxaa_
        complexed with 423, act, zn
      3. 2041138Domain d4xqac_: 4xqa C: [275501]
        automated match to d1uxaa_
        complexed with 423, act, zn
    11. Domains for 4xqb:
      1. 2041148Domain d4xqba_: 4xqb A: [275502]
        automated match to d1uxaa_
        complexed with 425, act, zn
      2. 2041149Domain d4xqbb_: 4xqb B: [275503]
        automated match to d1uxaa_
        complexed with 425, act, zn
      3. 2041150Domain d4xqbc_: 4xqb C: [275504]
        automated match to d1uxaa_
        complexed with 425, act, zn
  5. 2041169Human adenovirus 7 [TaxId:10519] [267756] (1 PDB entry)
  6. 2041173Human adenovirus b serotype 3 [TaxId:45659] [274530] (1 PDB entry)
  7. 2041177Human adenovirus b [TaxId:108098] [226821] (1 PDB entry)
  8. 2041179Human adenovirus type 11P [TaxId:343462] [158980] (1 PDB entry)
    Uniprot P35774 129-325
  9. 2041182Human adenovirus type 12 [TaxId:28282] [49840] (4 PDB entries)
    1. Domain for 1kac:
    2. Domains for 1nob:
      1. 2041185Domain d1noba_: 1nob A: [23850]
      2. 2041186Domain d1nobb_: 1nob B: [23851]
      3. 2041187Domain d1nobc_: 1nob C: [23852]
      4. 2041188Domain d1nobd_: 1nob D: [23853]
      5. 2041189Domain d1nobe_: 1nob E: [23854]
      6. 2041190Domain d1nobf_: 1nob F: [23855]
    3. Domain for 1p69:
    4. Domain for 1p6a:
  10. 2041192Human adenovirus type 2 [TaxId:10515] [49839] (2 PDB entries)
    1. Domain for 1qhv:
    2. Domains for 1qiu:
      1. 2041194Domain d1qiua1: 1qiu A:396-582 [23843]
        Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
      2. 2041195Domain d1qiub1: 1qiu B:396-582 [23844]
        Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
      3. 2041196Domain d1qiuc1: 1qiu C:396-582 [23845]
        Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
      4. 2041197Domain d1qiud1: 1qiu D:396-582 [23846]
        Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
      5. 2041198Domain d1qiue1: 1qiu E:396-582 [23847]
        Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
      6. 2041199Domain d1qiuf1: 1qiu F:396-582 [23848]
        Other proteins in same PDB: d1qiua2, d1qiub2, d1qiuc2, d1qiud2, d1qiue2, d1qiuf2
  11. 2041200Human adenovirus type 3 [TaxId:45659] [63720] (2 PDB entries)
    1. Domains for 1h7z:
      1. 2041201Domain d1h7za_: 1h7z A: [60733]
        complexed with so4
      2. 2041202Domain d1h7zb_: 1h7z B: [60734]
        complexed with so4
      3. 2041203Domain d1h7zc_: 1h7z C: [60735]
        complexed with so4
    2. Domain for 4liy:
  12. 2041205Human adenovirus type 5 [TaxId:28285] [49838] (1 PDB entry)

More info for Protein Adenovirus fiber protein "knob" domain from b.21.1.1: Adenovirus fiber protein "knob" domain

Timeline for Protein Adenovirus fiber protein "knob" domain from b.21.1.1: Adenovirus fiber protein "knob" domain: