SCOPe 2.04: Superfamily b.18.1: Galactose-binding domain-like

Lineage for Superfamily b.18.1: Galactose-binding domain-like

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll

4. Superfamily b.18.1: Galactose-binding domain-like [49785] (33 families)

Families:

1. b.18.1.1: Galactose-binding domain [49786] (2 proteins)
   automatically mapped to Pfam PF00754

2. b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) [49791] (4 proteins)
   automatically mapped to Pfam PF00754

3. b.18.1.3: delta-Endotoxin, C-terminal domain [49796] (1 protein)
   automatically mapped to Pfam PF03944

4. b.18.1.4: Ephrin receptor ligand binding domain [49800] (3 proteins)
   automatically mapped to Pfam PF01404

5. b.18.1.5: beta-Galactosidase/glucuronidase, N-terminal domain [49803] (4 proteins)

6. b.18.1.7: CBM22 [49811] (1 protein)
   CBM family 22, formerly x6b domain
   automatically mapped to Pfam PF02018

7. b.18.1.8: N-terminal domain of xrcc1 [49814] (1 protein)
   automatically mapped to Pfam PF01834

8. b.18.1.9: APC10-like [69210] (2 proteins)
   Pfam PF03256

9. b.18.1.10: Family 6 carbohydrate binding module, CBM6 [69213] (4 proteins)

10. b.18.1.11: CBM15 [69216] (1 protein)
    automatically mapped to Pfam PF03426

11. b.18.1.12: Family 17 carbohydrate binding module, CBM17 [69219] (1 protein)
    automatically mapped to Pfam PF03424

12. b.18.1.13: PepX C-terminal domain-like [69222] (3 proteins)

13. b.18.1.14: CBM4/9 [74893] (4 proteins)

14. b.18.1.15: Fucose binding lectin [74896] (1 protein)
    automatically mapped to Pfam PF00754

15. b.18.1.16: PA-IL, galactose-binding lectin 1 [82022] (1 protein)
    a truncated form of this fold lacking one of the N-terminal strands
    automatically mapped to Pfam PF07828

16. b.18.1.17: Chondroitin ABC lyase I, N-terminal domain [89236] (1 protein)
    automatically mapped to Pfam PF09092

17. b.18.1.18: Family 27 carbohydrate binding module, CBM27 [89241] (2 proteins)

18. b.18.1.19: Family 29 carbohydrate binding module, CBM29 [89244] (2 proteins)

19. b.18.1.20: Proprotein convertase P-domain [89249] (3 proteins)
    a truncated form of this fold lacking one of the N-terminal strands

20. b.18.1.21: F-box associated region, FBA [101585] (2 proteins)
    automatically mapped to Pfam PF04300

21. b.18.1.22: Allantoicase repeat [101588] (1 protein)
    automatically mapped to Pfam PF03561

22. b.18.1.23: Family 28 carbohydrate binding module, CBM28 [110122] (1 protein)
    automatically mapped to Pfam PF03424

23. b.18.1.24: Family 30 carbohydrate binding module, CBM30 (PKD repeat) [110125] (2 proteins)

24. b.18.1.25: Rhamnogalacturonase B, RhgB, C-terminal domain [110128] (1 protein)

25. b.18.1.26: Hypothetical protein AT3g04780/F7O18_27 [117108] (1 protein)
    Pfam PF06201; DUF1000

26. b.18.1.27: Beta-galactosidase LacA, domains 4 and 5 [117111] (1 protein)
    duplication: tandem repeat of two similar domains; some sequence similarity to the beta-Galactosidase/glucuronidase N-terminal domain (49803)

27. b.18.1.28: Family 36 carbohydrate binding module, CBM36 [117114] (1 protein)
    automatically mapped to Pfam PF03422

28. b.18.1.29: Extended PAW domain [141113] (1 protein)
    single domain; the N-terminal half is covered by Pfam PF04721; DUF750 (Smart 00613; PAW), the C-terminal half by PfamB PB028386

29. b.18.1.30: CBM11 [141116] (2 proteins)
    Pfam PF03425; Carbohydrate binding domain (family 11)

30. b.18.1.31: beta-mannanase CBM [141119] (1 protein)

31. b.18.1.32: YxiM N-terminal domain-like [158963] (1 protein)
    PfamB PB038265

32. b.18.1.33: NPCBM-like [158966] (3 proteins)
    Pfam PF08305

33. b.18.1.0: automated matches [191481] (1 protein)
    not a true family

More info for Superfamily b.18.1: Galactose-binding domain-like

Timeline for Superfamily b.18.1: Galactose-binding domain-like:

• Superfamily b.18.1: Galactose-binding domain-like first appeared (with stable ids) in SCOP 1.55
  
• Superfamily b.18.1: Galactose-binding domain-like appears in SCOPe 2.03
  
• Superfamily b.18.1: Galactose-binding domain-like appears in SCOPe 2.05
  
• Superfamily b.18.1: Galactose-binding domain-like appears in the current release, SCOPe 2.08