Lineage for Superfamily b.18.1: Galactose-binding domain-like

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2039145Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll
  4. 2039146Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families) (S)

Families:

  1. 2039147b.18.1.1: Galactose-binding domain [49786] (2 protein domains)
    automatically mapped to Pfam PF00754
  2. 2039169b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) [49791] (4 protein domains)
    automatically mapped to Pfam PF00754
  3. 2039210b.18.1.3: delta-Endotoxin, C-terminal domain [49796] (1 protein)
    automatically mapped to Pfam PF03944
  4. 2039222b.18.1.4: Ephrin receptor ligand binding domain [49800] (3 protein domains)
    automatically mapped to Pfam PF01404
  5. 2039263b.18.1.5: beta-Galactosidase/glucuronidase, N-terminal domain [49803] (4 protein domains)
  6. 2039495b.18.1.7: CBM22 [49811] (1 protein)
    CBM family 22, formerly x6b domain
    automatically mapped to Pfam PF02018
  7. 2039503b.18.1.8: N-terminal domain of xrcc1 [49814] (1 protein)
    automatically mapped to Pfam PF01834
  8. 2039519b.18.1.9: APC10-like [69210] (2 protein domains)
    Pfam PF03256
  9. 2039530b.18.1.10: Family 6 carbohydrate binding module, CBM6 [69213] (4 protein domains)
  10. 2039565b.18.1.11: CBM15 [69216] (1 protein)
    automatically mapped to Pfam PF03426
  11. 2039571b.18.1.12: Family 17 carbohydrate binding module, CBM17 [69219] (1 protein)
    automatically mapped to Pfam PF03424
  12. 2039577b.18.1.13: PepX C-terminal domain-like [69222] (3 protein domains)
  13. 2039626b.18.1.14: CBM4/9 [74893] (4 protein domains)
  14. 2039653b.18.1.15: Fucose binding lectin [74896] (1 protein)
    automatically mapped to Pfam PF00754
  15. 2039657b.18.1.16: PA-IL, galactose-binding lectin 1 [82022] (1 protein)
    a truncated form of this fold lacking one of the N-terminal strands
    automatically mapped to Pfam PF07828
  16. 2039775b.18.1.17: Chondroitin ABC lyase I, N-terminal domain [89236] (1 protein)
    automatically mapped to Pfam PF09092
  17. 2039779b.18.1.18: Family 27 carbohydrate binding module, CBM27 [89241] (2 protein domains)
  18. 2039790b.18.1.19: Family 29 carbohydrate binding module, CBM29 [89244] (2 protein domains)
  19. 2039811b.18.1.20: Proprotein convertase P-domain [89249] (3 protein domains)
    a truncated form of this fold lacking one of the N-terminal strands
  20. 2039835b.18.1.21: F-box associated region, FBA [101585] (2 protein domains)
    automatically mapped to Pfam PF04300
  21. 2039844b.18.1.22: Allantoicase repeat [101588] (1 protein)
    automatically mapped to Pfam PF03561
  22. 2039853b.18.1.23: Family 28 carbohydrate binding module, CBM28 [110122] (1 protein)
    automatically mapped to Pfam PF03424
  23. 2039858b.18.1.24: Family 30 carbohydrate binding module, CBM30 (PKD repeat) [110125] (2 protein domains)
  24. 2039871b.18.1.25: Rhamnogalacturonase B, RhgB, C-terminal domain [110128] (1 protein)
  25. 2039877b.18.1.26: Hypothetical protein AT3g04780/F7O18_27 [117108] (1 protein)
    Pfam PF06201; DUF1000
  26. 2039881b.18.1.27: Beta-galactosidase LacA, domains 4 and 5 [117111] (1 protein)
    duplication: tandem repeat of two similar domains; some sequence similarity to the beta-Galactosidase/glucuronidase N-terminal domain (49803)
  27. 2039888b.18.1.28: Family 36 carbohydrate binding module, CBM36 [117114] (1 protein)
    automatically mapped to Pfam PF03422
  28. 2039893b.18.1.29: Extended PAW domain [141113] (1 protein)
    single domain; the N-terminal half is covered by Pfam PF04721; DUF750 (Smart 00613; PAW), the C-terminal half by PfamB PB028386
  29. 2039900b.18.1.30: CBM11 [141116] (2 protein domains)
    Pfam PF03425; Carbohydrate binding domain (family 11)
  30. 2039910b.18.1.31: beta-mannanase CBM [141119] (1 protein)
  31. 2039914b.18.1.32: YxiM N-terminal domain-like [158963] (1 protein)
    PfamB PB038265
  32. 2039918b.18.1.33: NPCBM-like [158966] (3 protein domains)
    Pfam PF08305
  33. 2039933b.18.1.36: Collagen-binding domain [267607] (1 protein)
    PubMed 17977833 describes likely homology between (d2quoa_), (d1w99a3), and (d1nqdb_)
  34. 2039944b.18.1.37: Clostridium perfringens enterotoxin (CPE), C-terminal domain [267611] (2 protein domains)
    C-terminal part of Pfam PF03505; PubMed 17977833 describes homology between (d2quoa_), (d1w99a3), and (d1nqdb_)
  35. 2039963b.18.1.0: automated matches [191481] (1 protein)
    not a true family

More info for Superfamily b.18.1: Galactose-binding domain-like

Timeline for Superfamily b.18.1: Galactose-binding domain-like: