SCOPe 2.08: Protein: gamma-Crystallin

Lineage for Protein: gamma-Crystallin

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)
Fold b.11: gamma-Crystallin-like [49694] (1 superfamily)
sandwich; 8 strands in 2 sheets; greek-key
duplication: has internal pseudo twofold symmetry
Superfamily b.11.1: gamma-Crystallin-like [49695] (7 families)
Family b.11.1.1: Crystallins/Ca-binding development proteins [49696] (5 proteins)
Protein gamma-Crystallin [49697] (9 species)
duplication consists of two domains of this fold

Species:

Chicken (Gallus gallus) [TaxId:9031] [331435] (1 PDB entry)
- Domains for 5vh1:
  1. Domain d5vh1a1: 5vh1 A:1-90 [334664]
    automated match to d1zwma1
  2. Domain d5vh1a2: 5vh1 A:91-177 [334665]
    automated match to d1zwma2
Cow (Bos taurus), isoform E [TaxId:9913] [101571] (1 PDB entry)
- Domains for 1m8u:
  1. Domain d1m8ua1: 1m8u A:1-85 [91233]
  2. Domain d1m8ua2: 1m8u A:87-174 [91234]
Cow (Bos taurus), isoform F [TaxId:9913] [49701] (1 PDB entry)
- Domains for 1a45:
  1. Domain d1a45a1: 1a45 A:1-84 [23602]
  2. Domain d1a45a2: 1a45 A:86-174 [23603]
Cow (Bos taurus), isoform II (B) [TaxId:9913] [49698] (6 PDB entries)
1. Domains for 1amm:
  1. Domain d1amma1: 1amm A:1-85 [23587]
  2. Domain d1amma2: 1amm A:86-174 [23588]
2. Domain for 1dsl:
  - Domain d1dsla_: 1dsl A: [23591]
    C-terminal domain only
3. Domains for 1gam:
  1. Domain d1gama_: 1gam A: [23594]
    C-terminal domain only
  2. Domain d1gamb_: 1gam B: [23595]
    C-terminal domain only
4. Domains for 1gcs:
  1. Domain d1gcsa1: 1gcs A:1-85 [23592]
  2. Domain d1gcsa2: 1gcs A:86-174 [23593]
5. Domains for 1i5i:
  1. Domain d1i5ia1: 1i5i A:1-85 [61786]
    mutant
  2. Domain d1i5ia2: 1i5i A:86-173 [61787]
    mutant
6. Domains for 4gcr:
  1. Domain d4gcra1: 4gcr A:1-85 [23589]
  2. Domain d4gcra2: 4gcr A:86-174 [23590]
Cow (Bos taurus), isoform IIIb (D) [TaxId:9913] [49699] (1 PDB entry)
- Domains for 1elp:
  1. Domain d1elpa1: 1elp A:1-85 [23596]
  2. Domain d1elpa2: 1elp A:87-174 [23597]
  3. Domain d1elpb1: 1elp B:1-85 [23598]
  4. Domain d1elpb2: 1elp B:87-174 [23599]
Cow (Bos taurus), isoform S [TaxId:9913] [49700] (1 PDB entry)
- Domains for 1a7h:
  1. Domain d1a7ha_: 1a7h A: [23600]
    C-terminal domain only
  2. Domain d1a7hb_: 1a7h B: [23601]
    C-terminal domain only
Human (Homo sapiens) [TaxId:9606] [69202] (1 PDB entry)
- Domains for 1ha4:
  1. Domain d1ha4a_: 1ha4 A: [65745]
    C-terminal domain only
  2. Domain d1ha4b_: 1ha4 B: [65746]
    C-terminal domain only
Human (Homo sapiens), isoform D [TaxId:9606] [89230] (3 PDB entries)
1. Domains for 1h4a:
  1. Domain d1h4ax1: 1h4a X:1-85 [83479]
    mutant
  2. Domain d1h4ax2: 1h4a X:87-174 [83480]
    mutant
2. Domains for 1hk0:
  1. Domain d1hk0x1: 1hk0 X:1-85 [83522]
  2. Domain d1hk0x2: 1hk0 X:87-174 [83523]
3. Domains for 2kfb:
  1. Domain d2kfba1: 2kfb A:2-86 [242496]
    Other proteins in same PDB: d2kfba3
    automated match to d1h4ax1
    mutant
  2. Domain d2kfba2: 2kfb A:87-174 [242497]
    Other proteins in same PDB: d2kfba3
    automated match to d1h4ax2
    mutant
Mouse (Mus musculus) [TaxId:10090] [255018] (5 PDB entries)
1. Domains for 1zwm:
  1. Domain d1zwma1: 1zwm A:1-90 [241171]
    automated match to d1amma1
  2. Domain d1zwma2: 1zwm A:91-177 [241172]
    automated match to d1amma2
2. Domains for 1zwo:
  1. Domain d1zwoa1: 1zwo A:1-90 [241173]
    automated match to d1amma1
  2. Domain d1zwoa2: 1zwo A:91-177 [241174]
    automated match to d1amma2
3. Domains for 2a5m:
  1. Domain d2a5ma1: 2a5m A:1-90 [241212]
    automated match to d1amma1
  2. Domain d2a5ma2: 2a5m A:91-177 [241213]
    automated match to d1amma2
4. Domains for 6myg:
  1. Domain d6myga1: 6myg A:1-90 [360303]
    automated match to d1zwma1
  2. Domain d6myga2: 6myg A:91-177 [360304]
    automated match to d1zwma2
  3. Domain d6mygb1: 6myg B:4-90 [360257]
    automated match to d1zwma1
  4. Domain d6mygb2: 6myg B:91-177 [360258]
    automated match to d1zwma2
  5. Domain d6mygc1: 6myg C:2-90 [360279]
    automated match to d1zwma1
  6. Domain d6mygc2: 6myg C:91-177 [360280]
    automated match to d1zwma2
  7. Domain d6mygd1: 6myg D:2-90 [360292]
    automated match to d1zwma1
  8. Domain d6mygd2: 6myg D:91-177 [360293]
    automated match to d1zwma2
5. Domains for 6myh:
  1. Domain d6myha1: 6myh A:3-90 [360349]
    automated match to d1zwma1
  2. Domain d6myha2: 6myh A:91-177 [360350]
    automated match to d1zwma2
  3. Domain d6myhb1: 6myh B:1-89 [360265]
    automated match to d1zwma1
  4. Domain d6myhb2: 6myh B:91-177 [360266]
    automated match to d1zwma2
  5. Domain d6myhc1: 6myh C:3-90 [360346]
    automated match to d1zwma1
  6. Domain d6myhc2: 6myh C:91-177 [360347]
    automated match to d1zwma2
  7. Domain d6myhd1: 6myh D:3-88 [360286]
    automated match to d1zwma1
  8. Domain d6myhd2: 6myh D:91-177 [360287]
    automated match to d1zwma2

More info for Protein gamma-Crystallin from b.11.1.1: Crystallins/Ca-binding development proteins

Timeline for Protein gamma-Crystallin from b.11.1.1: Crystallins/Ca-binding development proteins:

Protein gamma-Crystallin from b.11.1.1: Crystallins/Ca-binding development proteins first appeared (with stable ids) in SCOP 1.55
Protein gamma-Crystallin from b.11.1.1: Crystallins/Ca-binding development proteins appears in SCOPe 2.07