SCOPe 2.06: Family b.11.1.1: Crystallins/Ca-binding development proteins

Lineage for Family b.11.1.1: Crystallins/Ca-binding development proteins

1. Root: SCOPe 2.06

2. Class b: All beta proteins [48724] (177 folds)

3. Fold b.11: gamma-Crystallin-like [49694] (1 superfamily)
   sandwich; 8 strands in 2 sheets; greek-key
   duplication: has internal pseudo twofold symmetry

4. Superfamily b.11.1: gamma-Crystallin-like [49695] (7 families)

5. Family b.11.1.1: Crystallins/Ca-binding development proteins [49696] (5 proteins)

Proteins:

1. beta-Crystallin [49702] (4 species)
   duplication consists of two domains of this fold

   1. Species Cow (Bos taurus) [TaxId:9913] [49703] (2 PDB entries)

   2. Species Human (Homo sapiens) [TaxId:9606] [101572] (2 PDB entries)

   3. Species Mouse (Mus musculus) [TaxId:10090] [49705] (1 PDB entry)

   4. Species Norway rat (Rattus norvegicus), isoform E [TaxId:10116] [49704] (6 PDB entries)

2. gamma-Crystallin [49697] (9 species)
   duplication consists of two domains of this fold

   1. Species Cow (Bos taurus), isoform E [TaxId:9913] [101571] (1 PDB entry)

   2. Species Cow (Bos taurus), isoform F [TaxId:9913] [49701] (1 PDB entry)

   3. Species Cow (Bos taurus), isoform II (B) [TaxId:9913] [49698] (6 PDB entries)

   4. Species Cow (Bos taurus), isoform IIIb (D) [TaxId:9913] [49699] (1 PDB entry)

   5. Species Cow (Bos taurus), isoform S [TaxId:9913] [49700] (1 PDB entry)

   6. Species Gallus gallus [TaxId:9031] [331435] (2 PDB entries)

   7. Species Human (Homo sapiens) [TaxId:9606] [69202] (1 PDB entry)

   8. Species Human (Homo sapiens), isoform D [TaxId:9606] [89230] (2 PDB entries)

   9. Species Mouse (Mus musculus) [TaxId:10090] [255018] (3 PDB entries)

3. Protein S [49706] (1 species)
   duplication consists of two domains of this fold

   • Species Myxococcus xanthus [TaxId:34] [49707] (3 PDB entries)

4. Spherulin 3a (S3a) [49708] (1 species)

   • Species Slime mold (Physarum polycephalum) [TaxId:5791] [49709] (2 PDB entries)

5. automated matches [254533] (1 species)
   not a true protein

   • Species Human (Homo sapiens) [TaxId:9606] [255181] (2 PDB entries)

More info for Family b.11.1.1: Crystallins/Ca-binding development proteins

Timeline for Family b.11.1.1: Crystallins/Ca-binding development proteins:

• Family b.11.1.1: Crystallins/Ca-binding development proteins first appeared (with stable ids) in SCOP 1.55
  
• Family b.11.1.1: Crystallins/Ca-binding development proteins appears in SCOPe 2.05
  
• Family b.11.1.1: Crystallins/Ca-binding development proteins appears in SCOPe 2.07
  
• Family b.11.1.1: Crystallins/Ca-binding development proteins appears in the current release, SCOPe 2.08