SCOPe 2.08: Protein: Theilovirus capsid proteins

Lineage for Protein: Theilovirus capsid proteins

Root: SCOPe 2.08
Class b: All beta proteins [48724] (180 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

Protein Theilovirus capsid proteins [49686] (1 species)

Species:

Theiler's murine encephalomyelitis virus, strain da [TaxId:12124] [49687] (2 PDB entries)
1. Domains for 1tme:
  1. Domain d1tme.1: 1tme 4:,2: [83123]
  2. Domain d1tme1_: 1tme 1: [23573]
  3. Domain d1tme3_: 1tme 3: [23575]
2. Domains for 1tmf:
  1. Domain d1tmf.1: 1tmf 4:,2: [83124]
  2. Domain d1tmf1_: 1tmf 1: [23576]
  3. Domain d1tmf3_: 1tmf 3: [23578]

More info for Protein Theilovirus capsid proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4)

Timeline for Protein Theilovirus capsid proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4):

Protein Theilovirus capsid proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) first appeared (with stable ids) in SCOP 1.55, called Protein Theiler's murine encephalomyelitis virus from b.10.1.4: Animal virus proteins
Protein Theilovirus capsid proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) appears in SCOPe 2.07