Lineage for Species: Human rhinovirus A 1A (HRV-1A) [TaxId: 12134]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2075627Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 protein domains)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2075745Protein Rhinovirus coat proteins [49670] (5 species)
  7. 2075778Species Human rhinovirus A 1A (HRV-1A) [TaxId:12134] [49673] (4 PDB entries)

PDB entries in Species: Human rhinovirus A 1A (HRV-1A) [TaxId: 12134]:

  1. Domain(s) for 1r1a:
    1. 2075779Domain d1r1a.1: 1r1a 4:,2: [83111]
      complexed with suc
    2. 2075780Domain d1r1a1_: 1r1a 1: [23537]
      complexed with suc
    3. 2075781Domain d1r1a3_: 1r1a 3: [23539]
      complexed with suc
  2. Domain(s) for 2hwd:
    1. 2075788Domain d2hwd.1: 2hwd 4:,2: [83133]
      complexed with w91
    2. 2075789Domain d2hwd1_: 2hwd 1: [23540]
      complexed with w91
    3. 2075790Domain d2hwd3_: 2hwd 3: [23542]
      complexed with w91
  3. Domain(s) for 2hwe:
    1. 2075782Domain d2hwe.1: 2hwe 4:,2: [83134]
      complexed with w54
    2. 2075783Domain d2hwe1_: 2hwe 1: [23543]
      complexed with w54
    3. 2075784Domain d2hwe3_: 2hwe 3: [23545]
      complexed with w54
  4. Domain(s) for 2hwf:
    1. 2075785Domain d2hwf.1: 2hwf 4:,2: [83135]
      complexed with jen
    2. 2075786Domain d2hwf1_: 2hwf 1: [23546]
      complexed with jen
    3. 2075787Domain d2hwf3_: 2hwf 3: [23548]
      complexed with jen

More info for Species Human rhinovirus A 1A (HRV-1A) [TaxId:12134] from b.121.4.1 Rhinovirus coat proteins

Timeline for Species Human rhinovirus A 1A (HRV-1A) [TaxId:12134] from b.121.4.1 Rhinovirus coat proteins: