Lineage for Species: Human rhinovirus 16, (HRV-16) [TaxId: 31708]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2075627Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 protein domains)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2075745Protein Rhinovirus coat proteins [49670] (5 species)
  7. 2075746Species Human rhinovirus 16, (HRV-16) [TaxId:31708] [49672] (9 PDB entries)

PDB entries in Species: Human rhinovirus 16, (HRV-16) [TaxId: 31708]:

  1. Domain(s) for 1aym:
    1. 2075747Domain d1aym.1: 1aym 4:,2: [83036]
      complexed with dao, myr, zn
    2. 2075748Domain d1aym1_: 1aym 1: [23519]
      complexed with dao, myr, zn
    3. 2075749Domain d1aym3_: 1aym 3: [23521]
      complexed with dao, myr, zn
  2. Domain(s) for 1ayn:
    1. 2075768Domain d1ayn.1: 1ayn 4:,2: [83037]
      complexed with dao, myr, zn
    2. 2075769Domain d1ayn1_: 1ayn 1: [23534]
      complexed with dao, myr, zn
    3. 2075770Domain d1ayn3_: 1ayn 3: [23536]
      complexed with dao, myr, zn
  3. Domain(s) for 1c8m:
    1. 2075762Domain d1c8m.1: 1c8m 4:,2: [83044]
      complexed with w11, zn
    2. 2075763Domain d1c8m1_: 1c8m 1: [23528]
      complexed with w11, zn
    3. 2075764Domain d1c8m3_: 1c8m 3: [23530]
      complexed with w11, zn
  4. Domain(s) for 1ncr:
    1. 2075756Domain d1ncr.1: 1ncr D:,B: [91805]
      complexed with myr, w11, zn
    2. 2075757Domain d1ncra_: 1ncr A: [91806]
      complexed with myr, w11, zn
    3. 2075758Domain d1ncrc_: 1ncr C: [91807]
      complexed with myr, w11, zn
  5. Domain(s) for 1nd2:
    1. 2075750Domain d1nd2.1: 1nd2 D:,B: [91809]
      complexed with myr, zn
    2. 2075751Domain d1nd2a_: 1nd2 A: [91810]
      complexed with myr, zn
    3. 2075752Domain d1nd2c_: 1nd2 C: [91811]
      complexed with myr, zn
  6. Domain(s) for 1nd3:
    1. 2075771Domain d1nd3.1: 1nd3 D:,B: [91812]
      complexed with w11, zn
    2. 2075772Domain d1nd3a_: 1nd3 A: [91813]
      complexed with w11, zn
    3. 2075773Domain d1nd3c_: 1nd3 C: [91814]
      complexed with w11, zn
  7. Domain(s) for 1qju:
    1. 2075753Domain d1qju.1: 1qju 4:,2: [83105]
      protein/RNA complex; complexed with myr, w01, zn
    2. 2075754Domain d1qju1_: 1qju 1: [23522]
      protein/RNA complex; complexed with myr, w01, zn
    3. 2075755Domain d1qju3_: 1qju 3: [23524]
      protein/RNA complex; complexed with myr, w01, zn
  8. Domain(s) for 1qjx:
    1. 2075765Domain d1qjx.1: 1qjx 4:,2: [83106]
      protein/RNA complex; complexed with myr, w02, zn
    2. 2075766Domain d1qjx1_: 1qjx 1: [23531]
      protein/RNA complex; complexed with myr, w02, zn
    3. 2075767Domain d1qjx3_: 1qjx 3: [23533]
      protein/RNA complex; complexed with myr, w02, zn
  9. Domain(s) for 1qjy:
    1. 2075759Domain d1qjy.1: 1qjy 4:,2: [83107]
      protein/RNA complex; complexed with myr, w03, zn
    2. 2075760Domain d1qjy1_: 1qjy 1: [23525]
      protein/RNA complex; complexed with myr, w03, zn
    3. 2075761Domain d1qjy3_: 1qjy 3: [23527]
      protein/RNA complex; complexed with myr, w03, zn

More info for Species Human rhinovirus 16, (HRV-16) [TaxId:31708] from b.121.4.1 Rhinovirus coat proteins

Timeline for Species Human rhinovirus 16, (HRV-16) [TaxId:31708] from b.121.4.1 Rhinovirus coat proteins: