Lineage for Protein: Poliovirus coat proteins

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2075626Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families) (S)
  5. 2075627Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 protein domains)
    the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
    there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)
  6. 2075683Protein Poliovirus coat proteins [49666] (3 species)

Species:

  1. 2075684Poliovirus type 1, strain Mahoney [TaxId:12080] [49667] (12 PDB entries)
    1. Domains for 1al2:
      1. 2075697Domain d1al2.1: 1al2 4:,2: [83030]
        complexed with myr, sph; mutant
      2. 2075698Domain d1al21_: 1al2 1: [23390]
        complexed with myr, sph; mutant
      3. 2075699Domain d1al23_: 1al2 3: [23392]
        complexed with myr, sph; mutant
    2. Domains for 1ar6:
      1. 2075709Domain d1ar6.1: 1ar6 4:,2: [83031]
        complexed with myr, sph; mutant
      2. 2075710Domain d1ar61_: 1ar6 1: [23405]
        complexed with myr, sph; mutant
      3. 2075711Domain d1ar63_: 1ar6 3: [23407]
        complexed with myr, sph; mutant
    3. Domains for 1ar7:
      1. 2075691Domain d1ar7.1: 1ar7 4:,2: [83032]
        complexed with myr, sph; mutant
      2. 2075692Domain d1ar71_: 1ar7 1: [23387]
        complexed with myr, sph; mutant
      3. 2075693Domain d1ar73_: 1ar7 3: [23389]
        complexed with myr, sph; mutant
    4. Domains for 1ar8:
      1. 2075712Domain d1ar8.1: 1ar8 4:,2: [83033]
        complexed with myr, sph; mutant
      2. 2075713Domain d1ar81_: 1ar8 1: [23408]
        complexed with myr, sph; mutant
      3. 2075714Domain d1ar83_: 1ar8 3: [23410]
        complexed with myr, sph; mutant
    5. Domains for 1ar9:
      1. 2075700Domain d1ar9.1: 1ar9 4:,2: [83034]
        complexed with myr, sph; mutant
      2. 2075701Domain d1ar91_: 1ar9 1: [23393]
        complexed with myr, sph; mutant
      3. 2075702Domain d1ar93_: 1ar9 3: [23395]
        complexed with myr, sph; mutant
    6. Domains for 1asj:
      1. 2075706Domain d1asj.1: 1asj 4:,2: [83035]
        complexed with myr, sph
      2. 2075707Domain d1asj1_: 1asj 1: [23402]
        complexed with myr, sph
      3. 2075708Domain d1asj3_: 1asj 3: [23404]
        complexed with myr, sph
    7. Domains for 1hxs:
      1. 2075685Domain d1hxs.1: 1hxs 4:,2: [83073]
        complexed with myr, plm
      2. 2075686Domain d1hxs1_: 1hxs 1: [65952]
        complexed with myr, plm
      3. 2075687Domain d1hxs3_: 1hxs 3: [65954]
        complexed with myr, plm
    8. Domains for 1po1:
      1. 2075694Domain d1po1.1: 1po1 4:,2: [83102]
        protein/RNA complex; complexed with j80, myr
      2. 2075695Domain d1po11_: 1po1 1: [23396]
        protein/RNA complex; complexed with j80, myr
      3. 2075696Domain d1po13_: 1po1 3: [23398]
        protein/RNA complex; complexed with j80, myr
    9. Domains for 1po2:
      1. 2075703Domain d1po2.1: 1po2 4:,2: [83103]
        protein/RNA complex; complexed with j77, myr
      2. 2075704Domain d1po21_: 1po2 1: [23399]
        protein/RNA complex; complexed with j77, myr
      3. 2075705Domain d1po23_: 1po2 3: [23401]
        protein/RNA complex; complexed with j77, myr
    10. Domains for 1pov:
      1. 2075715Domain d1pov0_: 1pov 0: [23411]
        contains unprocessed VP0
        complexed with myr, sph
      2. 2075716Domain d1pov1_: 1pov 1: [23412]
        contains unprocessed VP0
        complexed with myr, sph
      3. 2075717Domain d1pov3_: 1pov 3: [23413]
        contains unprocessed VP0
        complexed with myr, sph
    11. Domain for 1xyr:
    12. Domains for 2plv:
      1. 2075688Domain d2plv.1: 2plv 4:,2: [83137]
        complexed with myr, sph
      2. 2075689Domain d2plv1_: 2plv 1: [23384]
        complexed with myr, sph
      3. 2075690Domain d2plv3_: 2plv 3: [23386]
        complexed with myr, sph
  2. 2075719Poliovirus type 2, strain Lansing [TaxId:12083] [49668] (1 PDB entry)
  3. 2075723Poliovirus type 3, strain Sabin [TaxId:12086] [49669] (7 PDB entries)
    1. Domains for 1piv:
      1. 2075742Domain d1piv.1: 1piv 4:,2: [83101]
        complexed with myr, w71
      2. 2075743Domain d1piv1_: 1piv 1: [23435]
        complexed with myr, w71
      3. 2075744Domain d1piv3_: 1piv 3: [23437]
        complexed with myr, w71
    2. Domains for 1pvc:
      1. 2075724Domain d1pvc.1: 1pvc 4:,2: [83104]
        complexed with myr, sph
      2. 2075725Domain d1pvc1_: 1pvc 1: [23417]
        complexed with myr, sph
      3. 2075726Domain d1pvc3_: 1pvc 3: [23419]
        complexed with myr, sph
    3. Domains for 1vba:
      1. 2075739Domain d1vba.1: 1vba 4:,2: [83125]
        complexed with j78, myr
      2. 2075740Domain d1vba1_: 1vba 1: [23432]
        complexed with j78, myr
      3. 2075741Domain d1vba3_: 1vba 3: [23434]
        complexed with j78, myr
    4. Domains for 1vbb:
      1. 2075727Domain d1vbb.1: 1vbb 4:,2: [83126]
        complexed with j80, myr
      2. 2075728Domain d1vbb1_: 1vbb 1: [23420]
        complexed with j80, myr
      3. 2075729Domain d1vbb3_: 1vbb 3: [23422]
        complexed with j80, myr
    5. Domains for 1vbc:
      1. 2075730Domain d1vbc.1: 1vbc 4:,2: [83127]
        complexed with j77, myr
      2. 2075731Domain d1vbc1_: 1vbc 1: [23423]
        complexed with j77, myr
      3. 2075732Domain d1vbc3_: 1vbc 3: [23425]
        complexed with j77, myr
    6. Domains for 1vbd:
      1. 2075736Domain d1vbd.1: 1vbd 4:,2: [83128]
        complexed with j78, myr
      2. 2075737Domain d1vbd1_: 1vbd 1: [23426]
        complexed with j78, myr
      3. 2075738Domain d1vbd3_: 1vbd 3: [23428]
        complexed with j78, myr
    7. Domains for 1vbe:
      1. 2075733Domain d1vbe.1: 1vbe 4:,2: [83129]
        complexed with j78, myr; mutant
      2. 2075734Domain d1vbe1_: 1vbe 1: [23429]
        complexed with j78, myr; mutant
      3. 2075735Domain d1vbe3_: 1vbe 3: [23431]
        complexed with j78, myr; mutant

More info for Protein Poliovirus coat proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4)

Timeline for Protein Poliovirus coat proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4):