SCOPe 2.05: Protein: Aphthovirus (Foot-and-mouth disease virus) coat proteins

Lineage for Protein: Aphthovirus (Foot-and-mouth disease virus) coat proteins

Root: SCOPe 2.05
Class b: All beta proteins [48724] (176 folds)

Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

Superfamily b.121.4: Positive stranded ssRNA viruses [88633] (10 families)

Family b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) [88634] (10 proteins)
the order of the chains N-VP0-VP3-VP1-C is as in the polyprotein; VP0 is cleaved later upon capsid assembly to VP4 and VP2
there is a different order in the shuffled genome of insect picorna-like proteins (Cricket paralysis virus)

Protein Aphthovirus (Foot-and-mouth disease virus) coat proteins [49659] (1 species)

Species:

FMDV (Foot-and-mouth disease virus), strain bfs, 1860 [TaxId:12110] [49660] (4 PDB entries)
1. Domains for 1bbt:
  1. Domain d1bbt.1: 1bbt 4:,2: [83039]
  2. Domain d1bbt1_: 1bbt 1: [23366]
  3. Domain d1bbt3_: 1bbt 3: [23368]
2. Domains for 1fmd:
  1. Domain d1fmd.1: 1fmd 4:,2: [83051]
  2. Domain d1fmd1_: 1fmd 1: [23372]
  3. Domain d1fmd3_: 1fmd 3: [23374]
3. Domains for 1fod:
  1. Domain d1fod.1: 1fod 4:,2: [83052]
  2. Domain d1fod1_: 1fod 1: [23369]
  3. Domain d1fod3_: 1fod 3: [23371]
4. Domains for 1qqp:
  1. Domain d1qqp.1: 1qqp 4:,2: [83108]
  2. Domain d1qqp1_: 1qqp 1: [23363]
  3. Domain d1qqp3_: 1qqp 3: [23365]

More info for Protein Aphthovirus (Foot-and-mouth disease virus) coat proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4)

Timeline for Protein Aphthovirus (Foot-and-mouth disease virus) coat proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4):

Protein Aphthovirus (Foot-and-mouth disease virus) coat proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) first appeared (with stable ids) in SCOP 1.55, called Protein Foot-and-mouth desease virus from b.10.1.4: Animal virus proteins
Protein Aphthovirus (Foot-and-mouth disease virus) coat proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) appears in SCOPe 2.04
Protein Aphthovirus (Foot-and-mouth disease virus) coat proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) appears in SCOPe 2.06
Protein Aphthovirus (Foot-and-mouth disease virus) coat proteins from b.121.4.1: Picornaviridae-like VP (VP1, VP2, VP3 and VP4) appears in the current release, SCOPe 2.08