SCOP 1.63: Family b.10.1.4: Animal virus proteins

Lineage for Family b.10.1.4: Animal virus proteins

1. Root: SCOP 1.63

2. Class b: All beta proteins [48724] (119 folds)

3. Fold b.10: Viral coat and capsid proteins [49610] (1 superfamily)
   sandwich; 8 strands in 2 sheets; jelly-roll
   variations: some members have additional 1-2 strands

4. Superfamily b.10.1: Viral coat and capsid proteins [49611] (4 families)

5. Family b.10.1.4: Animal virus proteins [49656] (18 proteins)
   mammalian viruses

Proteins:

1. Adeno-associated virus [74887] (1 species)
   a vector for human genome therapy

   • Species Adeno-associated virus, aav-2 [TaxId:272636] [74888] (1 PDB entry)

2. Bovine enterovirus coat protein [49676] (1 species)

   • Species Bovine enterovirus, VG-5-27 [TaxId:12064] [49677] (1 PDB entry)

3. Calcivirus capsid protein [63691] (1 species)
   include the P (protruding) domain of complex b-stucture containing a beta-barrel similar to the second domain of EF-TU

   • Species Norwalk virus [TaxId:11983] [63692] (1 PDB entry)

4. Coxsackievirus A9 [49682] (1 species)

   • Species Host: human (Homo sapiens) [49683] (1 PDB entry)

5. Coxsackievirus B3 [49680] (1 species)

   • Species Host: human (Homo sapiens) [49681] (1 PDB entry)

6. Echovirus 11 [74889] (1 species)

   • Species Echovirus 11 [74890] (1 PDB entry)

7. Echovirus type 1 [49684] (1 species)

   • Species Host: human (Homo sapiens) [49685] (1 PDB entry)

8. Feline panleukopenia virus coat protein vp2 [49688] (1 species)

   • Species Feline panleukopenia virus, strain b [TaxId:10786] [49689] (1 PDB entry)

9. Foot-and-mouth desease virus [49659] (1 species)

   • Species Foot-and-mouth disease virus, (strain bfs, 1860) [49660] (4 PDB entries)

10. L1 protein [49692] (1 species)

    • Species Human papillomavirus type 16 [TaxId:333760] [49693] (1 PDB entry)

11. Mengo virus [49678] (1 species)

    • Species Host: monkey brain; middle size plaque variant [49679] (2 PDB entries)

12. Murine polyomavirus coat protein vp1 [49657] (1 species)

    • Species Murine polyoma virus, strain small-plaque 16 [49658] (5 PDB entries)

13. MVM coat protein [49664] (1 species)

    • Species Murine minute virus, strain i [TaxId:10794] [49665] (1 PDB entry)

14. Parvovirus (panleukopenia virus) capsid [49661] (3 species)

    1. Species Host: cat (Felis domestica) [49663] (3 PDB entries)

    2. Species Host: dog (Canis familiaris) [49662] (5 PDB entries)

    3. Species Host: pig (Sus scrofa) [69201] (1 PDB entry)

15. Poliovirus [49666] (3 species)

    1. Species Poliovirus type 1, strain Mahoney [TaxId:12080] [49667] (11 PDB entries)

    2. Species Poliovirus type 2, strain Lansing [TaxId:12083] [49668] (1 PDB entry)

    3. Species Poliovirus type 3, strain Sabin [TaxId:12086] [49669] (7 PDB entries)

16. Rhinovirus coat protein [49670] (5 species)

    1. Species Human rhinovirus 14 [TaxId:12131] [49671] (28 PDB entries)

    2. Species Human rhinovirus 16 [TaxId:31708] [49672] (6 PDB entries)

    3. Species Human rhinovirus 1A [49673] (4 PDB entries)

    4. Species Human rhinovirus 2 [TaxId:12130] [49674] (1 PDB entry)

    5. Species Human rhinovirus 3 [49675] (1 PDB entry)

17. Simian virus 40 (SV40) coat protein [49690] (1 species)

    • Species Simian virus 40, Sv40 [TaxId:10633] [49691] (1 PDB entry)

18. Theiler's murine encephalomyelitis virus [49686] (1 species)

    • Species Theiler's murine encephalomyelitis virus, strain da [TaxId:12124] [49687] (2 PDB entries)

More info for Family b.10.1.4: Animal virus proteins

Timeline for Family b.10.1.4: Animal virus proteins:

• Family b.10.1.4: Animal virus proteins first appeared (with stable ids) in SCOP 1.55
  
• Family b.10.1.4: Animal virus proteins appears in SCOP 1.61
  
• Family b.10.1.4: Animal virus proteins does not appear in SCOP 1.65