Lineage for Species: Satellite tobacco necrosis virus [TaxId: 12881]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2076863Superfamily b.121.7: Satellite viruses [88650] (1 family) (S)
  5. 2076864Family b.121.7.1: Satellite viruses [88651] (3 protein domains)
  6. 2076872Protein STNV coat protein [49621] (1 species)
  7. 2076873Species Satellite tobacco necrosis virus [TaxId:12881] [49622] (8 PDB entries)

PDB entries in Species: Satellite tobacco necrosis virus [TaxId: 12881]:

  1. Domain(s) for 1a34:
  2. Domain(s) for 1vtz:
    1. 2076874Domain d1vtz0_: 1vtz 0: [197589]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    2. 2076875Domain d1vtz1_: 1vtz 1: [197590]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    3. 2076876Domain d1vtz2_: 1vtz 2: [197591]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    4. 2076877Domain d1vtz3_: 1vtz 3: [197592]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    5. 2076878Domain d1vtz4_: 1vtz 4: [197593]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    6. 2076879Domain d1vtz6_: 1vtz 6: [197594]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    7. 2076880Domain d1vtze_: 1vtz e: [197595]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    8. 2076881Domain d1vtzf_: 1vtz f: [197596]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    9. 2076882Domain d1vtzg_: 1vtz g: [197597]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    10. 2076883Domain d1vtzh_: 1vtz h: [197598]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    11. 2076884Domain d1vtzi_: 1vtz i: [197599]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    12. 2076885Domain d1vtzj_: 1vtz j: [197600]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    13. 2076886Domain d1vtzl_: 1vtz l: [197601]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    14. 2076887Domain d1vtzm_: 1vtz m: [197602]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    15. 2076888Domain d1vtzn_: 1vtz n: [197603]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    16. 2076889Domain d1vtzo_: 1vtz o: [197604]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    17. 2076890Domain d1vtzp_: 1vtz p: [197605]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    18. 2076891Domain d1vtzq_: 1vtz q: [197606]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    19. 2076892Domain d1vtzr_: 1vtz r: [197607]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    20. 2076893Domain d1vtzs_: 1vtz s: [197608]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    21. 2076894Domain d1vtzt_: 1vtz t: [197609]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    22. 2076895Domain d1vtzu_: 1vtz u: [197610]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    23. 2076896Domain d1vtzv_: 1vtz v: [197611]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    24. 2076897Domain d1vtzw_: 1vtz w: [197612]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    25. 2076898Domain d1vtzx_: 1vtz x: [197613]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    26. 2076899Domain d1vtzy_: 1vtz y: [197614]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
    27. 2076900Domain d1vtzz_: 1vtz z: [197615]
      Other proteins in same PDB: d1vtz5_, d1vtz7_, d1vtzk_
      complexed with ca
      complexed with ca
  3. Domain(s) for 2buk:
  4. Domain(s) for 3rqv:
    1. 2076901Domain d3rqva_: 3rqv A: [185099]
      complexed with ca
      complexed with ca
    2. 2076902Domain d3rqvb_: 3rqv B: [185100]
      complexed with ca
      complexed with ca
    3. 2076903Domain d3rqvc_: 3rqv C: [185101]
      complexed with ca
      complexed with ca
    4. 2076904Domain d3rqvd_: 3rqv D: [185102]
      complexed with ca
      complexed with ca
    5. 2076905Domain d3rqve_: 3rqv E: [185103]
      complexed with ca
      complexed with ca
    6. 2076906Domain d3rqvf_: 3rqv F: [185104]
      complexed with ca
      complexed with ca
    7. 2076907Domain d3rqvg_: 3rqv G: [185105]
      complexed with ca
      complexed with ca
    8. 2076908Domain d3rqvh_: 3rqv H: [185106]
      complexed with ca
      complexed with ca
    9. 2076909Domain d3rqvi_: 3rqv I: [185107]
      complexed with ca
      complexed with ca
    10. 2076910Domain d3rqvj_: 3rqv J: [185108]
      complexed with ca
      complexed with ca
    11. 2076911Domain d3rqvk_: 3rqv K: [185109]
      complexed with ca
      complexed with ca
    12. 2076912Domain d3rqvl_: 3rqv L: [185110]
      complexed with ca
      complexed with ca
    13. 2076913Domain d3rqvm_: 3rqv M: [185111]
      complexed with ca
      complexed with ca
    14. 2076914Domain d3rqvn_: 3rqv N: [185112]
      complexed with ca
      complexed with ca
    15. 2076915Domain d3rqvo_: 3rqv O: [185113]
      complexed with ca
      complexed with ca
    16. 2076916Domain d3rqvp_: 3rqv P: [185114]
      complexed with ca
      complexed with ca
    17. 2076917Domain d3rqvq_: 3rqv Q: [185115]
      complexed with ca
      complexed with ca
    18. 2076918Domain d3rqvr_: 3rqv R: [185116]
      complexed with ca
      complexed with ca
    19. 2076919Domain d3rqvs_: 3rqv S: [185117]
      complexed with ca
      complexed with ca
    20. 2076920Domain d3rqvt_: 3rqv T: [185118]
      complexed with ca
      complexed with ca
    21. 2076921Domain d3rqvu_: 3rqv U: [185119]
      complexed with ca
      complexed with ca
    22. 2076922Domain d3rqvv_: 3rqv V: [185120]
      complexed with ca
      complexed with ca
    23. 2076923Domain d3rqvw_: 3rqv W: [185121]
      complexed with ca
      complexed with ca
    24. 2076924Domain d3rqvx_: 3rqv X: [185122]
      complexed with ca
      complexed with ca
    25. 2076925Domain d3rqvy_: 3rqv Y: [185123]
      complexed with ca
      complexed with ca
    26. 2076926Domain d3rqvz_: 3rqv Z: [185124]
      complexed with ca
      complexed with ca
  5. Domain(s) for 4bcu:
  6. Domain(s) for 4nia:
    1. 2076943Domain d4niaa_: 4nia A: [259391]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    2. 2076944Domain d4niab_: 4nia B: [259390]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    3. 2076945Domain d4niac_: 4nia C: [259392]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    4. 2076946Domain d4niad_: 4nia D: [259393]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    5. 2076947Domain d4niae_: 4nia E: [259394]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    6. 2076948Domain d4niaf_: 4nia F: [259395]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    7. 2076949Domain d4niag_: 4nia G: [259396]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    8. 2076950Domain d4niah_: 4nia H: [259397]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    9. 2076951Domain d4niai_: 4nia I: [259398]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    10. 2076952Domain d4niaj_: 4nia J: [259399]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    11. 2076953Domain d4niak_: 4nia K: [259400]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    12. 2076954Domain d4nial_: 4nia L: [259402]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    13. 2076955Domain d4niam_: 4nia M: [259401]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    14. 2076956Domain d4nian_: 4nia N: [259403]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
    15. 2076957Domain d4niao_: 4nia O: [259404]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, po4, so4
  7. Domain(s) for 4oq8:
  8. Domain(s) for 4oq9:
    1. 2076927Domain d4oq9a_: 4oq9 A: [259426]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    2. 2076928Domain d4oq9b_: 4oq9 B: [259425]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    3. 2076929Domain d4oq9c_: 4oq9 C: [259421]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    4. 2076930Domain d4oq9d_: 4oq9 D: [259423]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    5. 2076931Domain d4oq9e_: 4oq9 E: [259428]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    6. 2076932Domain d4oq9f_: 4oq9 F: [259422]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    7. 2076933Domain d4oq9g_: 4oq9 G: [259427]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    8. 2076934Domain d4oq9h_: 4oq9 H: [259432]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    9. 2076935Domain d4oq9i_: 4oq9 I: [259431]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    10. 2076936Domain d4oq9j_: 4oq9 J: [259436]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    11. 2076937Domain d4oq9k_: 4oq9 K: [259433]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    12. 2076938Domain d4oq9l_: 4oq9 L: [259435]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    13. 2076939Domain d4oq9m_: 4oq9 M: [259430]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    14. 2076940Domain d4oq9n_: 4oq9 N: [259429]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4
    15. 2076941Domain d4oq9o_: 4oq9 O: [259434]
      automated match to d1a34a_
      protein/RNA complex; complexed with mg, na, po4, so4

More info for Species Satellite tobacco necrosis virus [TaxId:12881] from b.121.7.1 STNV coat protein

Timeline for Species Satellite tobacco necrosis virus [TaxId:12881] from b.121.7.1 STNV coat protein: