SCOP 1.63: Family b.10.1.2: Plant virus proteins

Lineage for Family b.10.1.2: Plant virus proteins

1. Root: SCOP 1.63

2. Class b: All beta proteins [48724] (119 folds)

3. Fold b.10: Viral coat and capsid proteins [49610] (1 superfamily)
   sandwich; 8 strands in 2 sheets; jelly-roll
   variations: some members have additional 1-2 strands

4. Superfamily b.10.1: Viral coat and capsid proteins [49611] (4 families)

5. Family b.10.1.2: Plant virus proteins [49616] (18 proteins)

Proteins:

1. BMV coat protein [74885] (1 species)

   • Species Brome mosaic virus [TaxId:12302] [74886] (1 PDB entry)

2. BPMV coat protein [49627] (1 species)

   • Species Bean pod mottle virus [TaxId:12260] [49628] (1 PDB entry)

3. CMV coat protein [49645] (1 species)

   • Species Cucumber mosaic virus, strain fny [TaxId:12305] [49646] (1 PDB entry)

4. Cocksfoot mottle virus coat protein [82009] (1 species)

   • Species Cocksfoot mottle virus [TaxId:40979] [82010] (1 PDB entry)

5. Cowpea chlorotic mottle virus [49635] (1 species)

   • Species Host: cowpea (Vigna unguiculta), (L.) [49636] (1 PDB entry)

6. DYMV coat protein [49643] (1 species)

   • Species Desmodium yellow mottle tymovirus [TaxId:70821] [49644] (1 PDB entry)

7. PHMV coat protein [49641] (1 species)

   • Species Physalis mottle virus [TaxId:72539] [49642] (2 PDB entries)

8. RYMV capsid protein [49625] (1 species)

   • Species Rice yellow mottle virus [TaxId:31744] [49626] (1 PDB entry)

9. SBMV coat protein [49631] (1 species)

   • Species Southern bean mosaic virus, cow pea strain [TaxId:12139] [49632] (1 PDB entry)

10. SMV coat potein [49623] (1 species)

    • Species Sesbania mosaic virus [TaxId:12558] [49624] (1 PDB entry)

11. SPMV coat protein [49617] (1 species)

    • Species Satellite panicum mosaic virus [TaxId:154834] [49618] (1 PDB entry)

12. STMV coat protein [49619] (1 species)

    • Species Satellite tobacco mosaic virus [TaxId:12881] [49620] (1 PDB entry)

13. STNV coat protein [49621] (1 species)

    • Species Satellite tobacco necrosis virus [TaxId:12881] [49622] (1 PDB entry)

14. TAV coat protein [82011] (1 species)

    • Species Tomato aspermy virus [TaxId:12315] [82012] (1 PDB entry)

15. TBSV coat protein [49633] (1 species)

    • Species Tomato bushy stunt virus [TaxId:12145] [49634] (1 PDB entry)

16. TNV coat protein [49637] (1 species)

    • Species Tobacco necrosis virus [TaxId:12054] [49638] (1 PDB entry)

17. TRSV capsid protein [49629] (1 species)
    duplication: cosists of three very similar domains

    • Species Tobacco ringspot virus [TaxId:12282] [49630] (1 PDB entry)

18. TYMV coat protein [49639] (1 species)

    • Species Turnip yellow mosaic virus [TaxId:12154] [49640] (1 PDB entry)

More info for Family b.10.1.2: Plant virus proteins

Timeline for Family b.10.1.2: Plant virus proteins:

• Family b.10.1.2: Plant virus proteins first appeared (with stable ids) in SCOP 1.55
  
• Family b.10.1.2: Plant virus proteins appears in SCOP 1.61
  
• Family b.10.1.2: Plant virus proteins does not appear in SCOP 1.65