Lineage for Protein: Microvirus capsid proteins

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2075417Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 2076263Superfamily b.121.5: ssDNA viruses [88645] (3 families) (S)
  5. 2076264Family b.121.5.1: Microviridae-like VP [49612] (1 protein)
  6. 2076265Protein Microvirus capsid proteins [49613] (3 species)
    include capsid protein F and spike protein G

Species:

  1. 2076266Bacteriophage alpha3 [TaxId:10849] [82008] (2 PDB entries)
    1. Domains for 1m06:
      1. 2076267Domain d1m06f_: 1m06 F: [78326]
        protein/DNA complex
      2. 2076268Domain d1m06g_: 1m06 G: [78327]
        protein/DNA complex
    2. Domains for 1rb8:
      1. 2076269Domain d1rb8f_: 1rb8 F: [97279]
        protein/DNA complex; complexed with dc
      2. 2076270Domain d1rb8g_: 1rb8 G: [97280]
        protein/DNA complex; complexed with dc
  2. 2076271Bacteriophage G4 [TaxId:10843] [49615] (1 PDB entry)
  3. 2076274Bacteriophage phi-X174 [TaxId:10847] [49614] (4 PDB entries)
    1. Domains for 1al0:
      1. 2076277Domain d1al0f_: 1al0 F: [23274]
        Other proteins in same PDB: d1al01_, d1al02_, d1al03_, d1al04_
      2. 2076278Domain d1al0g_: 1al0 G: [23275]
        Other proteins in same PDB: d1al01_, d1al02_, d1al03_, d1al04_
    2. Domains for 1cd3:
      1. 2076279Domain d1cd3f_: 1cd3 F: [23276]
        Other proteins in same PDB: d1cd31_, d1cd32_, d1cd33_, d1cd34_
      2. 2076280Domain d1cd3g_: 1cd3 G: [23277]
        Other proteins in same PDB: d1cd31_, d1cd32_, d1cd33_, d1cd34_
    3. Domain for 1kvp:
      • 2076281Domain d1kvpa_: 1kvp A: [23278]
        chimera with a fragment 1-71 of vp1 from spiroplasma virus SPV4
    4. Domains for 2bpa:
      1. 2076275Domain d2bpa1_: 2bpa 1: [23272]
        protein/DNA complex
      2. 2076276Domain d2bpa2_: 2bpa 2: [23273]
        protein/DNA complex

More info for Protein Microvirus capsid proteins from b.121.5.1: Microviridae-like VP

Timeline for Protein Microvirus capsid proteins from b.121.5.1: Microviridae-like VP: