Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2368400Fold b.7: C2 domain-like [49561] (5 superfamilies)
    sandwich; 8 strands in 2 sheets; greek-key
  4. 2368401Superfamily b.7.1: C2 domain (Calcium/lipid-binding domain, CaLB) [49562] (3 families) (S)
    two constituent families are related by circular permutation
  5. 2368554Family b.7.1.2: Synaptotagmin-like (S variant) [49575] (11 protein domains)
    topologically similar to the C-terminal domain of PapD
  6. 2368580Protein Synaptogamin I [49576] (3 species)
    duplication: contains tandem repeat of two similar domains
  7. 2368600Species Norway rat (Rattus norvegicus) [TaxId:10116] [49577] (11 PDB entries)
    Uniprot P21707 271-419 ! Uniprot P21707 271-419

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 1byn:
  2. Domain(s) for 1k5w:
  3. Domain(s) for 1rsy:
  4. Domain(s) for 1tjm:
  5. Domain(s) for 1tjx:
  6. Domain(s) for 1uov:
  7. Domain(s) for 1uow:
  8. Domain(s) for 4wee:
  9. Domain(s) for 5ccj:
    1. 2368607Domain d5ccja_: 5ccj A: [275846]
      Other proteins in same PDB: d5ccjd2
      automated match to d2lhaa_
      complexed with gol, so4; mutant
    2. 2368608Domain d5ccjb_: 5ccj B: [275847]
      Other proteins in same PDB: d5ccjd2
      automated match to d2lhaa_
      complexed with gol, so4; mutant
    3. 2368609Domain d5ccjc_: 5ccj C: [275848]
      Other proteins in same PDB: d5ccjd2
      automated match to d2lhaa_
      complexed with gol, so4; mutant
    4. 2368610Domain d5ccjd1: 5ccj D:271-421 [275849]
      Other proteins in same PDB: d5ccjd2
      automated match to d2lhaa_
      complexed with gol, so4; mutant
  10. Domain(s) for 5w5c:
    1. 2368611Domain d5w5cf1: 5w5c F:143-267 [338393]
      Other proteins in same PDB: d5w5cb_, d5w5cc_, d5w5cd_
      automated match to d2r83a2
      complexed with gol, mg
    2. 2368612Domain d5w5cf2: 5w5c F:268-418 [338394]
      Other proteins in same PDB: d5w5cb_, d5w5cc_, d5w5cd_
      automated match to d2r83a1
      complexed with gol, mg
  11. Domain(s) for 5w5d:

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.7.1.2 Synaptogamin I

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from b.7.1.2 Synaptogamin I: