Lineage for Species: Alcaligenes xylosoxidans [TaxId: 85698]

  1. Root: SCOPe 2.01
  2. 929298Class b: All beta proteins [48724] (174 folds)
  3. 940170Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 940171Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. 940701Family b.6.1.3: Multidomain cupredoxins [49550] (7 proteins)
  6. 940824Protein Nitrite reductase, NIR [49551] (5 species)
    consists of two domains of this fold
  7. 941045Species Alcaligenes xylosoxidans [TaxId:85698] [49554] (31 PDB entries)
    Uniprot O68601 25-360 ! Uniprot O68601 26-359 ! Uniprot O68601

PDB entries in Species: Alcaligenes xylosoxidans [TaxId: 85698]:

  1. Domain(s) for 1bq5:
    1. 941122Domain d1bq5a1: 1bq5 A:8-159 [23110]
      complexed with cu
    2. 941123Domain d1bq5a2: 1bq5 A:160-340 [23111]
      complexed with cu
  2. Domain(s) for 1gs6:
    1. 941120Domain d1gs6x1: 1gs6 X:1-159 [65529]
      complexed with cu, mg; mutant
    2. 941121Domain d1gs6x2: 1gs6 X:160-336 [65530]
      complexed with cu, mg; mutant
  3. Domain(s) for 1gs7:
    1. 941086Domain d1gs7a1: 1gs7 A:1-159 [65531]
      complexed with cu, zn; mutant
    2. 941087Domain d1gs7a2: 1gs7 A:160-336 [65532]
      complexed with cu, zn; mutant
  4. Domain(s) for 1gs8:
    1. 941104Domain d1gs8a1: 1gs8 A:1-159 [65533]
      complexed with cu, zn; mutant
    2. 941105Domain d1gs8a2: 1gs8 A:160-336 [65534]
      complexed with cu, zn; mutant
  5. Domain(s) for 1hau:
    1. 941090Domain d1haua1: 1hau A:1-159 [60879]
      complexed with cu
    2. 941091Domain d1haua2: 1hau A:160-336 [60880]
      complexed with cu
  6. Domain(s) for 1haw:
    1. 941106Domain d1hawa1: 1haw A:1-159 [60881]
      complexed with cu1
    2. 941107Domain d1hawa2: 1haw A:160-336 [60882]
      complexed with cu1
  7. Domain(s) for 1ndr:
    1. 941142Domain d1ndra1: 1ndr A:11-166 [23118]
      CA-atoms only
      complexed with cu
    2. 941143Domain d1ndra2: 1ndr A:167-340 [23119]
      CA-atoms only
      complexed with cu
    3. 941144Domain d1ndrb1: 1ndr B:11-166 [23120]
      CA-atoms only
      complexed with cu
    4. 941145Domain d1ndrb2: 1ndr B:167-340 [23121]
      CA-atoms only
      complexed with cu
    5. 941146Domain d1ndrc1: 1ndr C:11-166 [23122]
      CA-atoms only
      complexed with cu
    6. 941147Domain d1ndrc2: 1ndr C:167-340 [23123]
      CA-atoms only
      complexed with cu
  8. Domain(s) for 1nds:
    1. 941136Domain d1ndsa1: 1nds A:11-166 [23112]
      CA-atoms only
      complexed with cu, no2
    2. 941137Domain d1ndsa2: 1nds A:167-340 [23113]
      CA-atoms only
      complexed with cu, no2
    3. 941138Domain d1ndsb1: 1nds B:11-166 [23114]
      CA-atoms only
      complexed with cu, no2
    4. 941139Domain d1ndsb2: 1nds B:167-340 [23115]
      CA-atoms only
      complexed with cu, no2
    5. 941140Domain d1ndsc1: 1nds C:11-166 [23116]
      CA-atoms only
      complexed with cu, no2
    6. 941141Domain d1ndsc2: 1nds C:167-340 [23117]
      CA-atoms only
      complexed with cu, no2
  9. Domain(s) for 1ndt:
    1. 941116Domain d1ndta1: 1ndt A:1-159 [23108]
      complexed with cl, cu
    2. 941117Domain d1ndta2: 1ndt A:160-336 [23109]
      complexed with cl, cu
  10. Domain(s) for 1oe1:
    1. 941048Domain d1oe1a1: 1oe1 A:1-159 [86891]
      atomic resolution structure
      complexed with cu, pg4
    2. 941049Domain d1oe1a2: 1oe1 A:160-336 [86892]
      atomic resolution structure
      complexed with cu, pg4
  11. Domain(s) for 1oe2:
    1. 941052Domain d1oe2a1: 1oe2 A:1-159 [86893]
      complexed with cu, pg4; mutant
    2. 941053Domain d1oe2a2: 1oe2 A:160-335 [86894]
      complexed with cu, pg4; mutant
  12. Domain(s) for 1oe3:
    1. 941058Domain d1oe3a1: 1oe3 A:1-159 [103903]
      complexed with cu, pg4
    2. 941059Domain d1oe3a2: 1oe3 A:160-336 [103904]
      complexed with cu, pg4
  13. Domain(s) for 1wa0:
    1. 941068Domain d1wa0x1: 1wa0 X:2-159 [114425]
      complexed with cu, mes, pg4, so4, zn; mutant
    2. 941069Domain d1wa0x2: 1wa0 X:160-336 [114426]
      complexed with cu, mes, pg4, so4, zn; mutant
  14. Domain(s) for 1wa1:
    1. 941070Domain d1wa1x1: 1wa1 X:2-159 [114427]
      complexed with cu, mes, so4, zn; mutant
    2. 941071Domain d1wa1x2: 1wa1 X:160-336 [114428]
      complexed with cu, mes, so4, zn; mutant
  15. Domain(s) for 1wa2:
    1. 941072Domain d1wa2x1: 1wa2 X:2-159 [114429]
      complexed with cu, mes, no2, so4, zn; mutant
    2. 941073Domain d1wa2x2: 1wa2 X:160-335 [114430]
      complexed with cu, mes, no2, so4, zn; mutant
  16. Domain(s) for 1wae:
    1. 941118Domain d1waea1: 1wae A:2-159 [114434]
      complexed with cu, zn; mutant
    2. 941119Domain d1waea2: 1wae A:160-335 [114435]
      complexed with cu, zn; mutant
  17. Domain(s) for 1zdq:
    1. 941080Domain d1zdqa1: 1zdq A:12-164 [124946]
      automatically matched to d1ndra1
      complexed with cu, msm
    2. 941081Domain d1zdqa2: 1zdq A:167-337 [124947]
      automatically matched to d1ndra2
      complexed with cu, msm
    3. 941082Domain d1zdqb1: 1zdq B:12-164 [124948]
      automatically matched to d1ndra1
      complexed with cu, msm
    4. 941083Domain d1zdqb2: 1zdq B:167-337 [124949]
      automatically matched to d1ndra2
      complexed with cu, msm
    5. 941084Domain d1zdqc1: 1zdq C:12-164 [124950]
      automatically matched to d1ndra1
      complexed with cu, msm
    6. 941085Domain d1zdqc2: 1zdq C:167-337 [124951]
      automatically matched to d1ndra2
      complexed with cu, msm
  18. Domain(s) for 1zds:
    1. 941062Domain d1zdsa1: 1zds A:12-164 [124952]
      automatically matched to d1ndra1
      complexed with acm, cu
    2. 941063Domain d1zdsa2: 1zds A:167-337 [124953]
      automatically matched to d1ndra2
      complexed with acm, cu
    3. 941064Domain d1zdsb1: 1zds B:12-164 [124954]
      automatically matched to d1ndra1
      complexed with acm, cu
    4. 941065Domain d1zdsb2: 1zds B:167-337 [124955]
      automatically matched to d1ndra2
      complexed with acm, cu
    5. 941066Domain d1zdsc1: 1zds C:12-164 [124956]
      automatically matched to d1ndra1
      complexed with acm, cu
    6. 941067Domain d1zdsc2: 1zds C:167-337 [124957]
      automatically matched to d1ndra2
      complexed with acm, cu
  19. Domain(s) for 2b08:
    1. 941110Domain d2b08a1: 2b08 A:12-164 [127626]
      automatically matched to d1ndra1
      complexed with acm, cu1
    2. 941111Domain d2b08a2: 2b08 A:167-337 [127627]
      automatically matched to d1ndra2
      complexed with acm, cu1
    3. 941112Domain d2b08b1: 2b08 B:12-164 [127628]
      automatically matched to d1ndra1
      complexed with acm, cu1
    4. 941113Domain d2b08b2: 2b08 B:167-337 [127629]
      automatically matched to d1ndra2
      complexed with acm, cu1
    5. 941114Domain d2b08c1: 2b08 C:12-164 [127630]
      automatically matched to d1ndra1
      complexed with acm, cu1
    6. 941115Domain d2b08c2: 2b08 C:167-337 [127631]
      automatically matched to d1ndra2
      complexed with acm, cu1
  20. Domain(s) for 2bo0:
    1. 941060Domain d2bo0a1: 2bo0 A:1-159 [128867]
      automatically matched to d1gs6x1
      complexed with pg4, zn; mutant
    2. 941061Domain d2bo0a2: 2bo0 A:160-336 [128868]
      automatically matched to d1gs6x2
      complexed with pg4, zn; mutant
  21. Domain(s) for 2bw4:
    1. 941046Domain d2bw4a1: 2bw4 A:8-164 [129320]
      automatically matched to d1gs6x1
      complexed with act, cu, mli, so4
    2. 941047Domain d2bw4a2: 2bw4 A:166-338 [129321]
      automatically matched to d1gs6x2
      complexed with act, cu, mli, so4
  22. Domain(s) for 2bw5:
    1. 941054Domain d2bw5a1: 2bw5 A:8-164 [129322]
      automatically matched to d1gs6x1
      complexed with act, cu, hoa, mli, po4
    2. 941055Domain d2bw5a2: 2bw5 A:166-338 [129323]
      automatically matched to d1gs6x2
      complexed with act, cu, hoa, mli, po4
  23. Domain(s) for 2bwd:
    1. 941056Domain d2bwda1: 2bwd A:8-164 [129340]
      automatically matched to d1gs6x1
      complexed with act, cu, hoa, mli, no2
    2. 941057Domain d2bwda2: 2bwd A:166-338 [129341]
      automatically matched to d1gs6x2
      complexed with act, cu, hoa, mli, no2
  24. Domain(s) for 2bwi:
    1. 941050Domain d2bwia1: 2bwi A:8-164 [129366]
      automatically matched to d1gs6x1
      complexed with act, cu, mli, no2
    2. 941051Domain d2bwia2: 2bwi A:166-338 [129367]
      automatically matched to d1gs6x2
      complexed with act, cu, mli, no2
  25. Domain(s) for 2fjs:
    1. 941074Domain d2fjsa1: 2fjs A:12-164 [133616]
      automatically matched to d1ndra1
      complexed with act, cu, cu1, trs
    2. 941075Domain d2fjsa2: 2fjs A:167-337 [133617]
      automatically matched to d1ndra2
      complexed with act, cu, cu1, trs
    3. 941076Domain d2fjsb1: 2fjs B:12-164 [133618]
      automatically matched to d1ndra1
      complexed with act, cu, cu1, trs
    4. 941077Domain d2fjsb2: 2fjs B:167-337 [133619]
      automatically matched to d1ndra2
      complexed with act, cu, cu1, trs
    5. 941078Domain d2fjsc1: 2fjs C:12-164 [133620]
      automatically matched to d1ndra1
      complexed with act, cu, cu1, trs
    6. 941079Domain d2fjsc2: 2fjs C:167-337 [133621]
      automatically matched to d1ndra2
      complexed with act, cu, cu1, trs
  26. Domain(s) for 2jfc:
    1. 941124Domain d2jfca1: 2jfc A:2-159 [138291]
      automatically matched to d1gs6x1
      complexed with cl, cu; mutant
    2. 941125Domain d2jfca2: 2jfc A:160-336 [138292]
      automatically matched to d1gs6x2
      complexed with cl, cu; mutant
    3. 941126Domain d2jfcb1: 2jfc B:2-159 [138293]
      automatically matched to d1gs6x1
      complexed with cl, cu; mutant
    4. 941127Domain d2jfcb2: 2jfc B:160-336 [138294]
      automatically matched to d1gs6x2
      complexed with cl, cu; mutant
    5. 941128Domain d2jfcc1: 2jfc C:2-159 [138295]
      automatically matched to d1gs6x1
      complexed with cl, cu; mutant
    6. 941129Domain d2jfcc2: 2jfc C:160-336 [138296]
      automatically matched to d1gs6x2
      complexed with cl, cu; mutant
    7. 941130Domain d2jfcd1: 2jfc D:2-159 [138297]
      automatically matched to d1gs6x1
      complexed with cl, cu; mutant
    8. 941131Domain d2jfcd2: 2jfc D:160-336 [138298]
      automatically matched to d1gs6x2
      complexed with cl, cu; mutant
    9. 941132Domain d2jfce1: 2jfc E:2-159 [138299]
      automatically matched to d1gs6x1
      complexed with cl, cu; mutant
    10. 941133Domain d2jfce2: 2jfc E:160-336 [138300]
      automatically matched to d1gs6x2
      complexed with cl, cu; mutant
    11. 941134Domain d2jfcf1: 2jfc F:2-159 [138301]
      automatically matched to d1gs6x1
      complexed with cl, cu; mutant
    12. 941135Domain d2jfcf2: 2jfc F:160-336 [138302]
      automatically matched to d1gs6x2
      complexed with cl, cu; mutant
  27. Domain(s) for 2vm3:
    1. 941088Domain d2vm3a1: 2vm3 A:3-159 [153312]
      automatically matched to d1gs6x1
      complexed with cu, pg4, zn
    2. 941089Domain d2vm3a2: 2vm3 A:160-335 [153313]
      automatically matched to d1gs6x2
      complexed with cu, pg4, zn
  28. Domain(s) for 2vm4:
    1. 941108Domain d2vm4a1: 2vm4 A:3-159 [153314]
      automatically matched to d1gs6x1
      complexed with cu, pg4, zn
    2. 941109Domain d2vm4a2: 2vm4 A:160-335 [153315]
      automatically matched to d1gs6x2
      complexed with cu, pg4, zn
  29. Domain(s) for 2vw4:
    1. 941096Domain d2vw4a1: 2vw4 A:3-159 [153658]
      automatically matched to d1gs6x1
      complexed with cu, pg4, zn
    2. 941097Domain d2vw4a2: 2vw4 A:160-335 [153659]
      automatically matched to d1gs6x2
      complexed with cu, pg4, zn
    3. 941098Domain d2vw4b1: 2vw4 B:3-159 [153660]
      automatically matched to d1gs6x1
      complexed with cu, pg4, zn
    4. 941099Domain d2vw4b2: 2vw4 B:160-335 [153661]
      automatically matched to d1gs6x2
      complexed with cu, pg4, zn
  30. Domain(s) for 2vw6:
    1. 941092Domain d2vw6a1: 2vw6 A:3-159 [153666]
      automatically matched to d1gs6x1
      complexed with cu, pg4, zn
    2. 941093Domain d2vw6a2: 2vw6 A:160-335 [153667]
      automatically matched to d1gs6x2
      complexed with cu, pg4, zn
    3. 941094Domain d2vw6b1: 2vw6 B:3-159 [153668]
      automatically matched to d1gs6x1
      complexed with cu, pg4, zn
    4. 941095Domain d2vw6b2: 2vw6 B:160-335 [153669]
      automatically matched to d1gs6x2
      complexed with cu, pg4, zn
  31. Domain(s) for 2vw7:
    1. 941100Domain d2vw7a1: 2vw7 A:3-159 [153670]
      automatically matched to d1gs6x1
      complexed with cu, pg4, zn
    2. 941101Domain d2vw7a2: 2vw7 A:160-335 [153671]
      automatically matched to d1gs6x2
      complexed with cu, pg4, zn
    3. 941102Domain d2vw7b1: 2vw7 B:3-159 [153672]
      automatically matched to d1gs6x1
      complexed with cu, pg4, zn
    4. 941103Domain d2vw7b2: 2vw7 B:160-335 [153673]
      automatically matched to d1gs6x2
      complexed with cu, pg4, zn

More info for Species Alcaligenes xylosoxidans [TaxId:85698] from b.6.1.3 Nitrite reductase, NIR

Timeline for Species Alcaligenes xylosoxidans [TaxId:85698] from b.6.1.3 Nitrite reductase, NIR: