Lineage for Species: Alcaligenes xylosoxidans [TaxId: 85698]

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2036241Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 2036242Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. 2036937Family b.6.1.3: Multidomain cupredoxins [49550] (8 protein domains)
  6. 2037154Protein Nitrite reductase, NIR [49551] (5 species)
    consists of two domains of this fold
  7. 2037373Species Alcaligenes xylosoxidans [TaxId:85698] [49554] (24 PDB entries)
    Uniprot O68601 25-360 ! Uniprot O68601 26-359 ! Uniprot O68601

PDB entries in Species: Alcaligenes xylosoxidans [TaxId: 85698]:

  1. Domain(s) for 1bq5:
    1. 2037420Domain d1bq5a1: 1bq5 A:8-159 [23110]
      complexed with cu
    2. 2037421Domain d1bq5a2: 1bq5 A:160-340 [23111]
      complexed with cu
  2. Domain(s) for 1gs6:
    1. 2037438Domain d1gs6x1: 1gs6 X:1-159 [65529]
      complexed with cu, mg; mutant
    2. 2037439Domain d1gs6x2: 1gs6 X:160-336 [65530]
      complexed with cu, mg; mutant
  3. Domain(s) for 1gs7:
    1. 2037434Domain d1gs7a1: 1gs7 A:1-159 [65531]
      complexed with cu, zn; mutant
    2. 2037435Domain d1gs7a2: 1gs7 A:160-336 [65532]
      complexed with cu, zn; mutant
  4. Domain(s) for 1gs8:
    1. 2037436Domain d1gs8a1: 1gs8 A:1-159 [65533]
      complexed with cu, zn; mutant
    2. 2037437Domain d1gs8a2: 1gs8 A:160-336 [65534]
      complexed with cu, zn; mutant
  5. Domain(s) for 1hau:
    1. 2037398Domain d1haua1: 1hau A:1-159 [60879]
      complexed with cu
    2. 2037399Domain d1haua2: 1hau A:160-336 [60880]
      complexed with cu
  6. Domain(s) for 1haw:
    1. 2037412Domain d1hawa1: 1haw A:1-159 [60881]
      complexed with cu1
    2. 2037413Domain d1hawa2: 1haw A:160-336 [60882]
      complexed with cu1
  7. Domain(s) for 1ndr:
    1. 2037446Domain d1ndra1: 1ndr A:11-166 [23118]
      CA-atoms only
      complexed with cu
    2. 2037447Domain d1ndra2: 1ndr A:167-340 [23119]
      CA-atoms only
      complexed with cu
    3. 2037448Domain d1ndrb1: 1ndr B:11-166 [23120]
      CA-atoms only
      complexed with cu
    4. 2037449Domain d1ndrb2: 1ndr B:167-340 [23121]
      CA-atoms only
      complexed with cu
    5. 2037450Domain d1ndrc1: 1ndr C:11-166 [23122]
      CA-atoms only
      complexed with cu
    6. 2037451Domain d1ndrc2: 1ndr C:167-340 [23123]
      CA-atoms only
      complexed with cu
  8. Domain(s) for 1nds:
    1. 2037440Domain d1ndsa1: 1nds A:11-166 [23112]
      CA-atoms only
      complexed with cu, no2
    2. 2037441Domain d1ndsa2: 1nds A:167-340 [23113]
      CA-atoms only
      complexed with cu, no2
    3. 2037442Domain d1ndsb1: 1nds B:11-166 [23114]
      CA-atoms only
      complexed with cu, no2
    4. 2037443Domain d1ndsb2: 1nds B:167-340 [23115]
      CA-atoms only
      complexed with cu, no2
    5. 2037444Domain d1ndsc1: 1nds C:11-166 [23116]
      CA-atoms only
      complexed with cu, no2
    6. 2037445Domain d1ndsc2: 1nds C:167-340 [23117]
      CA-atoms only
      complexed with cu, no2
  9. Domain(s) for 1ndt:
    1. 2037416Domain d1ndta1: 1ndt A:1-159 [23108]
      complexed with cl, cu
    2. 2037417Domain d1ndta2: 1ndt A:160-336 [23109]
      complexed with cl, cu
  10. Domain(s) for 1oe1:
    1. 2037374Domain d1oe1a1: 1oe1 A:1-159 [86891]
      atomic resolution structure
      complexed with cu, pg4
    2. 2037375Domain d1oe1a2: 1oe1 A:160-336 [86892]
      atomic resolution structure
      complexed with cu, pg4
  11. Domain(s) for 1oe2:
    1. 2037376Domain d1oe2a1: 1oe2 A:1-159 [86893]
      complexed with cu, pg4; mutant
    2. 2037377Domain d1oe2a2: 1oe2 A:160-335 [86894]
      complexed with cu, pg4; mutant
  12. Domain(s) for 1oe3:
    1. 2037378Domain d1oe3a1: 1oe3 A:1-159 [103903]
      complexed with cu, pg4
    2. 2037379Domain d1oe3a2: 1oe3 A:160-336 [103904]
      complexed with cu, pg4
  13. Domain(s) for 1wa0:
    1. 2037384Domain d1wa0x1: 1wa0 X:2-159 [114425]
      complexed with cu, mes, pg4, so4, zn; mutant
    2. 2037385Domain d1wa0x2: 1wa0 X:160-336 [114426]
      complexed with cu, mes, pg4, so4, zn; mutant
  14. Domain(s) for 1wa1:
    1. 2037386Domain d1wa1x1: 1wa1 X:2-159 [114427]
      complexed with cu, mes, so4, zn; mutant
    2. 2037387Domain d1wa1x2: 1wa1 X:160-336 [114428]
      complexed with cu, mes, so4, zn; mutant
  15. Domain(s) for 1wa2:
    1. 2037394Domain d1wa2x1: 1wa2 X:2-159 [114429]
      complexed with cu, mes, no2, so4, zn; mutant
    2. 2037395Domain d1wa2x2: 1wa2 X:160-335 [114430]
      complexed with cu, mes, no2, so4, zn; mutant
  16. Domain(s) for 1wae:
    1. 2037418Domain d1waea1: 1wae A:2-159 [114434]
      complexed with cu, zn; mutant
    2. 2037419Domain d1waea2: 1wae A:160-335 [114435]
      complexed with cu, zn; mutant
  17. Domain(s) for 2jl3:
    1. 2037380Domain d2jl3a1: 2jl3 A:3-159 [304139]
      automated match to d1gs7a1
      complexed with cu, mes, pg4, zn; mutant
    2. 2037381Domain d2jl3a2: 2jl3 A:160-335 [304140]
      automated match to d1gs7a2
      complexed with cu, mes, pg4, zn; mutant
    3. 2037382Domain d2jl3b1: 2jl3 B:3-159 [304141]
      automated match to d1gs7a1
      complexed with cu, mes, pg4, zn; mutant
    4. 2037383Domain d2jl3b2: 2jl3 B:160-335 [304142]
      automated match to d1gs7a2
      complexed with cu, mes, pg4, zn; mutant
  18. Domain(s) for 2vm3:
    1. 2037396Domain d2vm3a1: 2vm3 A:3-159 [153312]
      automated match to d1haua1
      complexed with cu, pg4, zn
    2. 2037397Domain d2vm3a2: 2vm3 A:160-335 [153313]
      automated match to d1haua2
      complexed with cu, pg4, zn
  19. Domain(s) for 2vm4:
    1. 2037414Domain d2vm4a1: 2vm4 A:2-159 [153314]
      automated match to d1haua1
      complexed with cu, pg4, zn
    2. 2037415Domain d2vm4a2: 2vm4 A:160-335 [153315]
      automated match to d1haua2
      complexed with cu, pg4, zn
  20. Domain(s) for 2vw4:
    1. 2037404Domain d2vw4a1: 2vw4 A:3-159 [153658]
      automated match to d1haua1
      complexed with cu, pg4, zn
    2. 2037405Domain d2vw4a2: 2vw4 A:160-335 [153659]
      automated match to d1haua2
      complexed with cu, pg4, zn
    3. 2037406Domain d2vw4b1: 2vw4 B:3-159 [153660]
      automated match to d1haua1
      complexed with cu, pg4, zn
    4. 2037407Domain d2vw4b2: 2vw4 B:160-335 [153661]
      automated match to d1haua2
      complexed with cu, pg4, zn
  21. Domain(s) for 2vw6:
    1. 2037400Domain d2vw6a1: 2vw6 A:3-159 [153666]
      automated match to d1haua1
      complexed with cu, pg4, zn
    2. 2037401Domain d2vw6a2: 2vw6 A:160-335 [153667]
      automated match to d1haua2
      complexed with cu, pg4, zn
    3. 2037402Domain d2vw6b1: 2vw6 B:2-159 [153668]
      automated match to d1haua1
      complexed with cu, pg4, zn
    4. 2037403Domain d2vw6b2: 2vw6 B:160-335 [153669]
      automated match to d1haua2
      complexed with cu, pg4, zn
  22. Domain(s) for 2vw7:
    1. 2037408Domain d2vw7a1: 2vw7 A:2-159 [153670]
      automated match to d1haua1
      complexed with cu, pg4, zn
    2. 2037409Domain d2vw7a2: 2vw7 A:160-336 [153671]
      automated match to d1haua2
      complexed with cu, pg4, zn
    3. 2037410Domain d2vw7b1: 2vw7 B:2-159 [153672]
      automated match to d1haua1
      complexed with cu, pg4, zn
    4. 2037411Domain d2vw7b2: 2vw7 B:160-335 [153673]
      automated match to d1haua2
      complexed with cu, pg4, zn
  23. Domain(s) for 2xwz:
    1. 2037422Domain d2xwza1: 2xwz A:2-159 [207372]
      automated match to d1oe1a1
      complexed with act, cu, no, no2, so4
    2. 2037423Domain d2xwza2: 2xwz A:160-336 [207373]
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4
    3. 2037424Domain d2xwzb1: 2xwz B:2-159 [207374]
      automated match to d1oe1a1
      complexed with act, cu, no, no2, so4
    4. 2037425Domain d2xwzb2: 2xwz B:160-336 [207375]
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4
    5. 2037426Domain d2xwzc1: 2xwz C:2-159 [207376]
      automated match to d1oe1a1
      complexed with act, cu, no, no2, so4
    6. 2037427Domain d2xwzc2: 2xwz C:160-336 [207377]
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4
    7. 2037428Domain d2xwzd1: 2xwz D:2-159 [207378]
      automated match to d1oe1a1
      complexed with act, cu, no, no2, so4
    8. 2037429Domain d2xwzd2: 2xwz D:160-336 [207379]
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4
    9. 2037430Domain d2xwze1: 2xwz E:2-159 [207380]
      automated match to d1oe1a1
      complexed with act, cu, no, no2, so4
    10. 2037431Domain d2xwze2: 2xwz E:160-336 [207381]
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4
    11. 2037432Domain d2xwzf1: 2xwz F:2-159 [207382]
      automated match to d1oe1a1
      complexed with act, cu, no, no2, so4
    12. 2037433Domain d2xwzf2: 2xwz F:160-335 [207383]
      automated match to d1oe1a2
      complexed with act, cu, no, no2, so4
  24. Domain(s) for 2zon:
    1. 2037388Domain d2zona1: 2zon A:2-159 [227320]
      Other proteins in same PDB: d2zong_
      automated match to d2vw6b1
      complexed with cu, hem
    2. 2037389Domain d2zona2: 2zon A:160-335 [227321]
      Other proteins in same PDB: d2zong_
      automated match to d2vw6b2
      complexed with cu, hem
    3. 2037390Domain d2zonb1: 2zon B:2-159 [227322]
      Other proteins in same PDB: d2zong_
      automated match to d2vw6b1
      complexed with cu, hem
    4. 2037391Domain d2zonb2: 2zon B:160-335 [227323]
      Other proteins in same PDB: d2zong_
      automated match to d2vw6b2
      complexed with cu, hem
    5. 2037392Domain d2zonc1: 2zon C:2-159 [227324]
      Other proteins in same PDB: d2zong_
      automated match to d2vw6b1
      complexed with cu, hem
    6. 2037393Domain d2zonc2: 2zon C:160-335 [227325]
      Other proteins in same PDB: d2zong_
      automated match to d2vw6b2
      complexed with cu, hem

More info for Species Alcaligenes xylosoxidans [TaxId:85698] from b.6.1.3 Nitrite reductase, NIR

Timeline for Species Alcaligenes xylosoxidans [TaxId:85698] from b.6.1.3 Nitrite reductase, NIR: