SCOPe 2.07: Species: Achromobacter cycloclastes [TaxId: 223]

Lineage for Species: Achromobacter cycloclastes [TaxId: 223]

Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds)
Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
sandwich; 7 strands in 2 sheets, greek-key
variations: some members have additional 1-2 strands
Superfamily b.6.1: Cupredoxins [49503] (8 families)
contains copper-binding site
Family b.6.1.3: Multidomain cupredoxins [49550] (8 proteins)
Protein Nitrite reductase, NIR [49551] (5 species)
consists of two domains of this fold
Species Achromobacter cycloclastes [TaxId:223] [49552] (60 PDB entries)

PDB entries in Species: Achromobacter cycloclastes [TaxId: 223]:

Domain(s) for 1kcb:
1. Domain d1kcba1: 1kcb A:8-166 [90951]
  complexed with cu; mutant
2. Domain d1kcba2: 1kcb A:167-340 [90952]
  complexed with cu; mutant
Domain(s) for 1nia:
1. Domain d1niaa1: 1nia A:8-166 [23058]
  complexed with cu
2. Domain d1niaa2: 1nia A:167-340 [23059]
  complexed with cu
3. Domain d1niab1: 1nia B:8-166 [23060]
  complexed with cu
4. Domain d1niab2: 1nia B:167-340 [23061]
  complexed with cu
5. Domain d1niac1: 1nia C:8-166 [23062]
  complexed with cu
6. Domain d1niac2: 1nia C:167-340 [23063]
  complexed with cu
Domain(s) for 1nib:
1. Domain d1niba1: 1nib A:8-166 [23064]
  complexed with cu
2. Domain d1niba2: 1nib A:167-340 [23065]
  complexed with cu
3. Domain d1nibb1: 1nib B:8-166 [23066]
  complexed with cu
4. Domain d1nibb2: 1nib B:167-340 [23067]
  complexed with cu
5. Domain d1nibc1: 1nib C:8-166 [23068]
  complexed with cu
6. Domain d1nibc2: 1nib C:167-340 [23069]
  complexed with cu
Domain(s) for 1nic:
1. Domain d1nica1: 1nic A:8-166 [23050]
  complexed with cu, so4
2. Domain d1nica2: 1nic A:167-340 [23051]
  complexed with cu, so4
Domain(s) for 1nid:
1. Domain d1nida1: 1nid A:8-166 [23054]
  complexed with cu, no2
2. Domain d1nida2: 1nid A:167-340 [23055]
  complexed with cu, no2
Domain(s) for 1nie:
1. Domain d1niea1: 1nie A:8-166 [23052]
  complexed with cu
2. Domain d1niea2: 1nie A:167-340 [23053]
  complexed with cu
Domain(s) for 1nif:
1. Domain d1nifa1: 1nif A:8-166 [23048]
  complexed with cu
2. Domain d1nifa2: 1nif A:167-340 [23049]
  complexed with cu
Domain(s) for 1rzp:
1. Domain d1rzpa1: 1rzp A:8-166 [98212]
  complexed with cu, mes, so4
2. Domain d1rzpa2: 1rzp A:167-335 [98213]
  complexed with cu, mes, so4
3. Domain d1rzpb1: 1rzp B:8-166 [98214]
  complexed with cu, mes, so4
4. Domain d1rzpb2: 1rzp B:167-335 [98215]
  complexed with cu, mes, so4
5. Domain d1rzpc1: 1rzp C:4-166 [98216]
  complexed with cu, mes, so4
6. Domain d1rzpc2: 1rzp C:167-335 [98217]
  complexed with cu, mes, so4
Domain(s) for 1rzq:
1. Domain d1rzqa1: 1rzq A:8-166 [98218]
  complexed with acy, cu, so4
2. Domain d1rzqa2: 1rzq A:167-335 [98219]
  complexed with acy, cu, so4
3. Domain d1rzqb1: 1rzq B:8-166 [98220]
  complexed with acy, cu, so4
4. Domain d1rzqb2: 1rzq B:167-335 [98221]
  complexed with acy, cu, so4
5. Domain d1rzqc1: 1rzq C:4-166 [98222]
  complexed with acy, cu, so4
6. Domain d1rzqc2: 1rzq C:167-335 [98223]
  complexed with acy, cu, so4
Domain(s) for 2bw4:
1. Domain d2bw4a1: 2bw4 A:7-166 [129320]
  automated match to d1nifa1
  complexed with act, cu, mli, so4
2. Domain d2bw4a2: 2bw4 A:167-340 [129321]
  automated match to d1nifa2
  complexed with act, cu, mli, so4
Domain(s) for 2bw5:
1. Domain d2bw5a1: 2bw5 A:7-166 [129322]
  automated match to d1nifa1
  complexed with act, cu, hoa, mli, po4
2. Domain d2bw5a2: 2bw5 A:167-340 [129323]
  automated match to d1nifa2
  complexed with act, cu, hoa, mli, po4
Domain(s) for 2bwd:
1. Domain d2bwda1: 2bwd A:7-166 [129340]
  automated match to d1nifa1
  complexed with act, cu, hoa, mli, no2
2. Domain d2bwda2: 2bwd A:167-340 [129341]
  automated match to d1nifa2
  complexed with act, cu, hoa, mli, no2
Domain(s) for 2bwi:
1. Domain d2bwia1: 2bwi A:7-166 [129366]
  automated match to d1nifa1
  complexed with act, cu, mli, no2
2. Domain d2bwia2: 2bwi A:167-340 [129367]
  automated match to d1nifa2
  complexed with act, cu, mli, no2
Domain(s) for 2nrd:
1. Domain d2nrda1: 2nrd A:8-166 [23056]
  complexed with cu
2. Domain d2nrda2: 2nrd A:167-340 [23057]
  complexed with cu
Domain(s) for 2y1a:
1. Domain d2y1aa1: 2y1a A:8-166 [207448]
  automated match to d1nifa1
  complexed with act, cu, no, so4
2. Domain d2y1aa2: 2y1a A:167-339 [207449]
  automated match to d1nifa2
  complexed with act, cu, no, so4
Domain(s) for 5i6k:
1. Domain d5i6ka1: 5i6k A:7-166 [319553]
  automated match to d1kcba1
  complexed with cu, no2
2. Domain d5i6ka2: 5i6k A:167-340 [319554]
  automated match to d2bw4a2
  complexed with cu, no2
Domain(s) for 5i6l:
1. Domain d5i6la1: 5i6l A:8-166 [319544]
  automated match to d1kcba1
  complexed with act, cu, mli, no2
2. Domain d5i6la2: 5i6l A:167-339 [319545]
  automated match to d2bw4a2
  complexed with act, cu, mli, no2
Domain(s) for 5i6m:
1. Domain d5i6ma1: 5i6m A:8-166 [319597]
  automated match to d1kcba1
  complexed with act, cu, mli, no, no2
2. Domain d5i6ma2: 5i6m A:167-339 [319598]
  automated match to d2bw4a2
  complexed with act, cu, mli, no, no2
Domain(s) for 5i6n:
1. Domain d5i6na1: 5i6n A:8-166 [319594]
  automated match to d1kcba1
  complexed with cu, no, no2
2. Domain d5i6na2: 5i6n A:167-339 [319595]
  automated match to d2bw4a2
  complexed with cu, no, no2
Domain(s) for 5i6o:
1. Domain d5i6oa1: 5i6o A:8-166 [319555]
  automated match to d1kcba1
  complexed with 2no, cu, no
2. Domain d5i6oa2: 5i6o A:167-339 [319556]
  automated match to d2bw4a2
  complexed with 2no, cu, no
Domain(s) for 5i6p:
1. Domain d5i6pa1: 5i6p A:8-166 [319592]
  automated match to d1kcba1
  complexed with cu, no2
2. Domain d5i6pa2: 5i6p A:167-339 [319593]
  automated match to d2bw4a2
  complexed with cu, no2
Domain(s) for 5n8f:
1. Domain d5n8fa1: 5n8f A:8-166 [337060]
  automated match to d1kcba1
  complexed with cu, so4
2. Domain d5n8fa2: 5n8f A:167-340 [337061]
  automated match to d2bw4a2
  complexed with cu, so4
Domain(s) for 5n8g:
1. Domain d5n8ga1: 5n8g A:8-166 [337000]
  automated match to d1kcba1
  complexed with cu, so4
2. Domain d5n8ga2: 5n8g A:167-340 [337002]
  automated match to d2bw4a2
  complexed with cu, so4
Domain(s) for 5n8h:
1. Domain d5n8ha1: 5n8h A:8-166 [337009]
  automated match to d1kcba1
  complexed with cu, so4
2. Domain d5n8ha2: 5n8h A:167-340 [337010]
  automated match to d2bw4a2
  complexed with cu, so4
Domain(s) for 5n8i:
1. Domain d5n8ia1: 5n8i A:7-166 [337022]
  automated match to d1kcba1
  complexed with cu, mli
2. Domain d5n8ia2: 5n8i A:167-340 [337023]
  automated match to d2bw4a2
  complexed with cu, mli
Domain(s) for 5of5:
1. Domain d5of5a1: 5of5 A:7-166 [352562]
  automated match to d5i6la1
  complexed with act, cu, mli, no2, so4
2. Domain d5of5a2: 5of5 A:167-340 [352563]
  automated match to d2bw4a2
  complexed with act, cu, mli, no2, so4
Domain(s) for 5of6:
1. Domain d5of6a1: 5of6 A:7-166 [352537]
  automated match to d5i6la1
  complexed with act, cu, mli, no, no2, so4
2. Domain d5of6a2: 5of6 A:167-340 [352538]
  automated match to d2bw4a2
  complexed with act, cu, mli, no, no2, so4
Domain(s) for 5of7:
1. Domain d5of7a1: 5of7 A:7-166 [352539]
  automated match to d5i6la1
  complexed with act, cu, mli, no, no2, so4
2. Domain d5of7a2: 5of7 A:167-340 [352540]
  automated match to d2bw4a2
  complexed with act, cu, mli, no, no2, so4
Domain(s) for 5of8:
1. Domain d5of8a1: 5of8 A:8-166 [352583]
  automated match to d5i6la1
  complexed with act, cu, no, no2, so4
2. Domain d5of8a2: 5of8 A:167-340 [352584]
  automated match to d2bw4a2
  complexed with act, cu, no, no2, so4
Domain(s) for 5ofc:
1. Domain d5ofca1: 5ofc A:7-166 [352541]
  automated match to d5i6la1
  complexed with act, cu, no2
2. Domain d5ofca2: 5ofc A:167-340 [352542]
  automated match to d2bw4a2
  complexed with act, cu, no2
Domain(s) for 5ofd:
1. Domain d5ofda1: 5ofd A:7-166 [352571]
  automated match to d5i6la1
  complexed with cu, no
2. Domain d5ofda2: 5ofd A:167-339 [352572]
  automated match to d2bw4a2
  complexed with cu, no
Domain(s) for 5ofe:
1. Domain d5ofea1: 5ofe A:7-166 [352543]
  automated match to d5i6la1
  complexed with cu, no
2. Domain d5ofea2: 5ofe A:167-340 [352544]
  automated match to d2bw4a2
  complexed with cu, no
Domain(s) for 5off:
1. Domain d5offa1: 5off A:8-166 [352535]
  automated match to d5i6la1
  complexed with act, cu, no2
2. Domain d5offa2: 5off A:167-339 [352536]
  automated match to d2bw4a2
  complexed with act, cu, no2
Domain(s) for 5ofg:
1. Domain d5ofga1: 5ofg A:8-166 [352525]
  automated match to d5i6la1
  complexed with act, cu, no2
2. Domain d5ofga2: 5ofg A:167-339 [352526]
  automated match to d2bw4a2
  complexed with act, cu, no2
Domain(s) for 5ofh:
1. Domain d5ofha1: 5ofh A:8-166 [352670]
  automated match to d5i6la1
  complexed with act, cu, no2
2. Domain d5ofha2: 5ofh A:167-339 [352671]
  automated match to d2bw4a2
  complexed with act, cu, no2
Domain(s) for 5og2:
1. Domain d5og2a1: 5og2 A:8-166 [352585]
  automated match to d5i6la1
  complexed with act, cu, no2
2. Domain d5og2a2: 5og2 A:167-339 [352586]
  automated match to d2bw4a2
  complexed with act, cu, no2
Domain(s) for 5og3:
1. Domain d5og3a1: 5og3 A:8-166 [352527]
  automated match to d5i6la1
  complexed with act, cu, no, no2
2. Domain d5og3a2: 5og3 A:167-339 [352528]
  automated match to d2bw4a2
  complexed with act, cu, no, no2
Domain(s) for 5og4:
1. Domain d5og4a1: 5og4 A:8-166 [352589]
  automated match to d5i6la1
  complexed with act, cu, no, no2
2. Domain d5og4a2: 5og4 A:167-339 [352590]
  automated match to d2bw4a2
  complexed with act, cu, no, no2
Domain(s) for 5og5:
1. Domain d5og5a1: 5og5 A:8-166 [352533]
  automated match to d5i6la1
  complexed with act, cu, no, no2
2. Domain d5og5a2: 5og5 A:167-339 [352534]
  automated match to d2bw4a2
  complexed with act, cu, no, no2
Domain(s) for 5og6:
1. Domain d5og6a1: 5og6 A:8-166 [352560]
  automated match to d5i6la1
  complexed with act, cu, no, no2
2. Domain d5og6a2: 5og6 A:167-339 [352561]
  automated match to d2bw4a2
  complexed with act, cu, no, no2
Domain(s) for 5ogf:
1. Domain d5ogfa1: 5ogf A:8-166 [352558]
  automated match to d5i6la1
  complexed with act, cu, no, no2
2. Domain d5ogfa2: 5ogf A:167-339 [352559]
  automated match to d2bw4a2
  complexed with act, cu, no, no2
Domain(s) for 5ogg:
1. Domain d5ogga1: 5ogg A:8-166 [352545]
  automated match to d5i6la1
  complexed with act, cu, no2
2. Domain d5ogga2: 5ogg A:167-339 [352546]
  automated match to d2bw4a2
  complexed with act, cu, no2
Domain(s) for 6gb8:
1. Domain d6gb8a1: 6gb8 A:8-166 [363256]
  automated match to d1nifa1
  complexed with cu, no2
2. Domain d6gb8a2: 6gb8 A:167-340 [363257]
  automated match to d1nifa2
  complexed with cu, no2
Domain(s) for 6gbb:
1. Domain d6gbba1: 6gbb A:8-166 [363243]
  automated match to d1nifa1
  complexed with cu, no2
2. Domain d6gbba2: 6gbb A:167-340 [363244]
  automated match to d1nifa2
  complexed with cu, no2
Domain(s) for 6gby:
- Domain d6gbya2: 6gby A:167-340 [363228]
  Other proteins in same PDB: d6gbya1
  automated match to d2bw4a2
  complexed with cu, no2
Domain(s) for 6gcg:
- Domain d6gcga2: 6gcg A:167-340 [363232]
  Other proteins in same PDB: d6gcga1
  automated match to d2bw4a2
  complexed with cu
Domain(s) for 6gsq:
- Domain d6gsqa2: 6gsq A:167-340 [370048]
  Other proteins in same PDB: d6gsqa1
  automated match to d2bw4a2
  complexed with cu, so4
Domain(s) for 6gt0:
- Domain d6gt0a2: 6gt0 A:167-340 [369951]
  Other proteins in same PDB: d6gt0a1
  automated match to d2bw4a2
  complexed with cu, mli, no2, so4
Domain(s) for 6gt2:
- Domain d6gt2a2: 6gt2 A:167-340 [369949]
  Other proteins in same PDB: d6gt2a1
  automated match to d2bw4a2
  complexed with cu, mli
Domain(s) for 6gti:
- Domain d6gtia2: 6gti A:167-340 [369963]
  Other proteins in same PDB: d6gtia1
  automated match to d2bw4a2
  complexed with cu, mli, no2
Domain(s) for 6gtj:
1. Domain d6gtja1: 6gtj A:8-166 [370135]
  automated match to d1nifa1
  complexed with cu
2. Domain d6gtja2: 6gtj A:167-340 [370136]
  automated match to d1nifa2
  complexed with cu
Domain(s) for 6gtk:
- Domain d6gtka2: 6gtk A:167-340 [370080]
  Other proteins in same PDB: d6gtka1
  automated match to d2bw4a2
  complexed with cu, mli, no2
Domain(s) for 6gtl:
- Domain d6gtla2: 6gtl A:167-340 [369971]
  Other proteins in same PDB: d6gtla1
  automated match to d2bw4a2
  complexed with cu, mli, no2
Domain(s) for 6gtn:
- Domain d6gtna2: 6gtn A:167-340 [370008]
  Other proteins in same PDB: d6gtna1
  automated match to d2bw4a2
  complexed with cu, mli, no2
Domain(s) for 6qwg:
1. Domain d6qwga1: 6qwg A:8-166 [377154]
  automated match to d5i6la1
  complexed with cu, no2
2. Domain d6qwga2: 6qwg A:167-340 [377155]
  automated match to d2bw4a2
  complexed with cu, no2
Domain(s) for 6zu6:
1. Domain d6zu6a1: 6zu6 A:7-166 [407647]
  automated match to d5i6la1
  complexed with cu, mli, no2, so4
2. Domain d6zu6a2: 6zu6 A:167-339 [407648]
  automated match to d2bw4a2
  complexed with cu, mli, no2, so4
Domain(s) for 6zua:
1. Domain d6zuaa1: 6zua A:7-166 [407643]
  automated match to d5i6la1
  complexed with cu, mli, no, no2, so4
2. Domain d6zuaa2: 6zua A:167-339 [407644]
  automated match to d2bw4a2
  complexed with cu, mli, no, no2, so4
Domain(s) for 6zub:
1. Domain d6zuba1: 6zub A:7-166 [407687]
  automated match to d5i6la1
  complexed with cu, mli, no2, so4
2. Domain d6zuba2: 6zub A:167-339 [407688]
  automated match to d2bw4a2
  complexed with cu, mli, no2, so4
Domain(s) for 6zud:
1. Domain d6zuda1: 6zud A:7-166 [407639]
  automated match to d5i6la1
  complexed with cu, mli, no2, so4
2. Domain d6zuda2: 6zud A:167-339 [407640]
  automated match to d2bw4a2
Domain(s) for 6zut:
1. Domain d6zuta1: 6zut A:7-166 [407682]
  automated match to d5i6la1
  complexed with cu, mli, no, so4
2. Domain d6zuta2: 6zut A:167-339 [407683]
  automated match to d2bw4a2
  complexed with cu, mli, no, so4

More info for Species Achromobacter cycloclastes [TaxId:223] from b.6.1.3 Nitrite reductase, NIR

Timeline for Species Achromobacter cycloclastes [TaxId:223] from b.6.1.3 Nitrite reductase, NIR:

Species Achromobacter cycloclastes [TaxId:223] from b.6.1.3 Nitrite reductase, NIR first appeared (with stable ids) in SCOP 1.55
Species Achromobacter cycloclastes [TaxId:223] from b.6.1.3 Nitrite reductase, NIR appears in SCOPe 2.06
Species Achromobacter cycloclastes [TaxId:223] from b.6.1.3 Nitrite reductase, NIR does not appear in SCOPe 2.08