SCOPe 2.05: Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II

Lineage for Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
   sandwich; 7 strands in 2 sheets, greek-key
   variations: some members have additional 1-2 strands

4. Superfamily b.6.1: Cupredoxins [49503] (8 families)
   contains copper-binding site

5. Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II [49541] (3 proteins)

Proteins:

1. Cytochrome c oxidase [49544] (4 species)

   1. Species Cow (Bos taurus) [TaxId:9913] [49545] (26 PDB entries)

   2. Species Paracoccus denitrificans [TaxId:266] [49546] (4 PDB entries)

   3. Species Rhodobacter sphaeroides [TaxId:1063] [74870] (6 PDB entries)

   4. Species Thermus thermophilus, ba3 type [TaxId:274] [49547] (30 PDB entries)

2. Quinol oxidase (CyoA) [49542] (1 species)

   • Species Escherichia coli [TaxId:562] [49543] (3 PDB entries)

3. automated matches [233094] (2 species)
   not a true protein

   1. Species Cow (Bos taurus) [TaxId:9913] [255752] (1 PDB entry)

   2. Species Rhodobacter sphaeroides [TaxId:272943] [233095] (4 PDB entries)

More info for Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II

Timeline for Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II:

• Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II first appeared (with stable ids) in SCOP 1.55
  
• Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II appears in SCOPe 2.04
  
• Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II appears in SCOPe 2.06
  
• Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II appears in the current release, SCOPe 2.08