Lineage for Protein: Plastocyanin

  1. Root: SCOP 1.75
  2. 781541Class b: All beta proteins [48724] (174 folds)
  3. 791145Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 791146Superfamily b.6.1: Cupredoxins [49503] (7 families) (S)
    contains copper-binding site
  5. 791147Family b.6.1.1: Plastocyanin/azurin-like [49504] (9 proteins)
    mono-domain proteins
  6. 791385Protein Plastocyanin [49507] (14 species)

Species:

  1. 791386Anabaena variabilis [TaxId:1172] [49517] (5 PDB entries)
    1. Domain for 1fa4:
    2. Domain for 1nin:
    3. Domain for 1tu2:
    4. Domains for 2cj3:
      1. 791387Domain d2cj3a1: 2cj3 A:1-105 [130516]
        automatically matched to d1fa4a_
        complexed with cu
      2. 791388Domain d2cj3b1: 2cj3 B:1-105 [130517]
        automatically matched to d1fa4a_
        complexed with cu
    5. Domains for 2gim:
      1. 791389Domain d2gima1: 2gim A:1-105 [135244]
        automatically matched to d1fa4a_
        complexed with cu
      2. 791390Domain d2gimc1: 2gim C:1-105 [135245]
        automatically matched to d1fa4a_
        complexed with cu
  2. 791394Cyanobacterium (Phormidium laminosum) [TaxId:32059] [49518] (2 PDB entries)
    1. Domains for 1baw:
      1. 791398Domain d1bawa_: 1baw A: [22868]
      2. 791399Domain d1bawb_: 1baw B: [22869]
      3. 791400Domain d1bawc_: 1baw C: [22870]
        complexed with cu, zn
    2. Domains for 2q5b:
      1. 791395Domain d2q5ba1: 2q5b A:1-105 [150045]
        automatically matched to d1bawa_
        complexed with act, cu, k, zn
      2. 791396Domain d2q5bb1: 2q5b B:1-105 [150046]
        automatically matched to d1bawa_
        complexed with act, cu, k, zn
      3. 791397Domain d2q5bc1: 2q5b C:1-105 [150047]
        automatically matched to d1bawa_
        complexed with act, cu, k, zn
  3. 791401Cyanobacterium (Synechocystis sp.), pcc 6803 [TaxId:1148] [49519] (6 PDB entries)
    1. Domain for 1j5c:
    2. Domain for 1j5d:
    3. Domain for 1jxd:
    4. Domain for 1jxf:
    5. Domain for 1m9w:
    6. Domain for 1pcs:
  4. 791408Cyanobacterium (Synechocystis sp.), pcc 7942 [TaxId:1143] [49520] (2 PDB entries)
    1. Domain for 1bxu:
    2. Domain for 1bxv:
  5. 791411Fern (Adiantum capillus-veneris) [TaxId:13818] [49516] (2 PDB entries)
    1. Domain for 1kdi:
    2. Domain for 1kdj:
  6. 791414French bean (Phaseolus vulgaris) [TaxId:3885] [49509] (1 PDB entry)
  7. 791416Green alga (Chlamydomonas reinhardtii) [TaxId:3055] [49514] (1 PDB entry)
  8. 791418Green alga (Enteromorpha prolifera) [TaxId:3117] [49515] (1 PDB entry)
  9. 791420Parsley (Petroselinum crispum) [TaxId:4043] [49510] (2 PDB entries)
    1. Domain for 1pla:
    2. Domain for 1plb:
  10. 791423Photosynthetic prokaryote (Prochlorothrix hollandica) [TaxId:1223] [49521] (3 PDB entries)
    1. Domain for 1b3i:
    2. Domain for 2b3i:
    3. Domain for 2jxm:
  11. 791427Poplar (Populus nigra), variant italica [TaxId:3691] [49508] (10 PDB entries)
    1. Domains for 1jxg:
      1. 791431Domain d1jxga_: 1jxg A: [67413]
      2. 791432Domain d1jxgb_: 1jxg B: [67414]
        complexed with cu1, sul; mutant
    2. Domain for 1plc:
    3. Domain for 1pnc:
    4. Domain for 1pnd:
    5. Domain for 1tkw:
    6. Domain for 2pcy:
    7. Domain for 3pcy:
    8. Domain for 4pcy:
    9. Domain for 5pcy:
    10. Domain for 6pcy:
  12. 791439Spinach (Spinacia oleracea) [TaxId:3562] [49511] (2 PDB entries)
    1. Domain for 1ag6:
    2. Domain for 1oow:
  13. 791442Ulva pertusa, a sea lettuce [TaxId:3120] [49513] (1 PDB entry)
  14. 791444White campion (Silene pratensis) [TaxId:52853] [49512] (2 PDB entries)
    1. Domains for 1byo:
      1. 791446Domain d1byoa_: 1byo A: [22859]
      2. 791447Domain d1byob_: 1byo B: [22860]
        complexed with cu
    2. Domain for 1byp:

More info for Protein Plastocyanin from b.6.1.1: Plastocyanin/azurin-like

Timeline for Protein Plastocyanin from b.6.1.1: Plastocyanin/azurin-like: