SCOPe 2.07: Protein: p65 subunit of NF-kappa B (NFKB), N-terminal domain

Lineage for Protein: p65 subunit of NF-kappa B (NFKB), N-terminal domain

Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds)
Fold b.2: Common fold of diphtheria toxin/transcription factors/cytochrome f [49379] (9 superfamilies)
sandwich; 9 strands in 2 sheet; greek-key; subclass of immunoglobin-like fold
Superfamily b.2.5: p53-like transcription factors [49417] (8 families)
Family b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain [81315] (7 proteins)
automatically mapped to Pfam PF00554
Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain [49428] (3 species)

Species:

Chicken (Gallus gallus), C-rel [TaxId:9031] [74867] (1 PDB entry)
- Domains for 1gji:
  1. Domain d1gjia2: 1gji A:7-181 [70188]
    Other proteins in same PDB: d1gjia1, d1gjib1
    protein/DNA complex
  2. Domain d1gjib2: 1gji B:7-181 [70190]
    Other proteins in same PDB: d1gjia1, d1gjib1
    protein/DNA complex
Human (Homo sapiens) [TaxId:9606] [49430] (1 PDB entry)
- Domains for 1nfi:
  1. Domain d1nfia2: 1nfi A:20-189 [22455]
    Other proteins in same PDB: d1nfia1, d1nfib_, d1nfic1, d1nfid_, d1nfie_, d1nfif_
  2. Domain d1nfic2: 1nfi C:20-189 [22456]
    Other proteins in same PDB: d1nfia1, d1nfib_, d1nfic1, d1nfid_, d1nfie_, d1nfif_
Mouse (Mus musculus) [TaxId:10090] [49429] (8 PDB entries)
1. Domain for 1ikn:
  - Domain d1ikna2: 1ikn A:19-191 [22449]
    Other proteins in same PDB: d1ikna1, d1iknc_, d1iknd_
2. Domains for 1le5:
  1. Domain d1le5a2: 1le5 A:20-191 [84584]
    Other proteins in same PDB: d1le5a1, d1le5a3, d1le5b1, d1le5b2, d1le5e1, d1le5e3, d1le5f1, d1le5f2
    protein/DNA complex
  2. Domain d1le5e2: 1le5 E:20-191 [84588]
    Other proteins in same PDB: d1le5a1, d1le5a3, d1le5b1, d1le5b2, d1le5e1, d1le5e3, d1le5f1, d1le5f2
    protein/DNA complex
3. Domains for 1le9:
  1. Domain d1le9a2: 1le9 A:20-191 [84592]
    Other proteins in same PDB: d1le9a1, d1le9a3, d1le9b1, d1le9b2, d1le9e1, d1le9e3, d1le9f1, d1le9f2
    protein/DNA complex
  2. Domain d1le9e2: 1le9 E:20-191 [84596]
    Other proteins in same PDB: d1le9a1, d1le9a3, d1le9b1, d1le9b2, d1le9e1, d1le9e3, d1le9f1, d1le9f2
    protein/DNA complex
4. Domain for 1lei:
  - Domain d1leia2: 1lei A:20-191 [84600]
    Other proteins in same PDB: d1leia1, d1leia3, d1leib1, d1leib2
    protein/DNA complex
5. Domains for 1ram:
  1. Domain d1rama2: 1ram A:19-191 [22452]
    Other proteins in same PDB: d1rama1, d1ramb1
    protein/DNA complex; complexed with dtt
  2. Domain d1ramb2: 1ram B:19-191 [22453]
    Other proteins in same PDB: d1rama1, d1ramb1
    protein/DNA complex; complexed with dtt
6. Domain for 1vkx:
  - Domain d1vkxa2: 1vkx A:19-191 [22454]
    Other proteins in same PDB: d1vkxa1, d1vkxb1, d1vkxb2
    protein/DNA complex
7. Domain for 2i9t:
  - Domain d2i9ta2: 2i9t A:19-190 [137130]
    Other proteins in same PDB: d2i9ta1, d2i9ta3, d2i9tb1, d2i9tb2
    automated match to d1gjia2
    protein/DNA complex
8. Domains for 2ram:
  1. Domain d2rama2: 2ram A:19-191 [22450]
    Other proteins in same PDB: d2rama1, d2ramb1
    protein/DNA complex; complexed with dtv
  2. Domain d2ramb2: 2ram B:19-191 [22451]
    Other proteins in same PDB: d2rama1, d2ramb1
    protein/DNA complex; complexed with dtv

More info for Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain from b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain

Timeline for Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain from b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain:

Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain from b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain first appeared (with stable ids) in SCOP 1.55, called Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain from b.2.5.1: p53-like transcription factors
Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain from b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain appears in SCOPe 2.06
Protein p65 subunit of NF-kappa B (NFKB), N-terminal domain from b.2.5.3: Rel/Dorsal transcription factors, DNA-binding domain appears in the current release, SCOPe 2.08