Lineage for Protein: Cu,Zn superoxide dismutase, SOD

  1. Root: SCOP 1.73
  2. 651986Class b: All beta proteins [48724] (165 folds)
  3. 651987Fold b.1: Immunoglobulin-like beta-sandwich [48725] (27 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 658038Superfamily b.1.8: Cu,Zn superoxide dismutase-like [49329] (1 family) (S)
    has additional strand at N-terminus
  5. 658039Family b.1.8.1: Cu,Zn superoxide dismutase-like [49330] (2 proteins)
  6. 658052Protein Cu,Zn superoxide dismutase, SOD [49331] (11 species)

Species:

  1. 658053Actinobacillus pleuropneumoniae [TaxId:715] [49340] (1 PDB entry)
  2. 658056African clawed frog (Xenopus laevis) [TaxId:8355] [49334] (1 PDB entry)
  3. 658059Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [49336] (12 PDB entries)
    1. Domain for 1b4l:
    2. Domain for 1b4t:
    3. Domain for 1f18:
    4. Domain for 1f1a:
    5. Domain for 1f1d:
    6. Domains for 1f1g:
      1. 658060Domain d1f1ga_: 1f1g A: [76153]
      2. 658061Domain d1f1gb_: 1f1g B: [76154]
      3. 658062Domain d1f1gc_: 1f1g C: [76155]
      4. 658063Domain d1f1gd_: 1f1g D: [76156]
      5. 658064Domain d1f1ge_: 1f1g E: [76157]
      6. 658065Domain d1f1gf_: 1f1g F: [76158]
        complexed with cu, po4, zn; mutant
    7. Domain for 1jcv:
    8. Domains for 1jk9:
      1. 658079Domain d1jk9a_: 1jk9 A: [63149]
        Other proteins in same PDB: d1jk9b1, d1jk9b2, d1jk9d1, d1jk9d2
      2. 658080Domain d1jk9c_: 1jk9 C: [63152]
        Other proteins in same PDB: d1jk9b1, d1jk9b2, d1jk9d1, d1jk9d2
        complexed with Yccs copper chaperone
        complexed with so4, zn; mutant
    9. Domains for 1sdy:
      1. 658075Domain d1sdya_: 1sdy A: [22285]
      2. 658076Domain d1sdyb_: 1sdy B: [22286]
      3. 658077Domain d1sdyc_: 1sdy C: [22287]
      4. 658078Domain d1sdyd_: 1sdy D: [22288]
        complexed with cu, zn; mutant
    10. Domain for 1yaz:
    11. Domain for 1yso:
    12. Domain for 2jcw:
  4. 658081Blood fluke (Schistosoma mansoni) [TaxId:6183] [110066] (2 PDB entries)
    1. Domains for 1to4:
      1. 658082Domain d1to4a_: 1to4 A: [107162]
      2. 658083Domain d1to4b_: 1to4 B: [107163]
      3. 658084Domain d1to4c_: 1to4 C: [107164]
      4. 658085Domain d1to4d_: 1to4 D: [107165]
        complexed with cu, zn
    2. Domains for 1to5:
      1. 658086Domain d1to5a_: 1to5 A: [107166]
      2. 658087Domain d1to5b_: 1to5 B: [107167]
      3. 658088Domain d1to5c_: 1to5 C: [107168]
      4. 658089Domain d1to5d_: 1to5 D: [107169]
        complexed with act, cu, zn
  5. 658090Cow (Bos taurus) [TaxId:9913] [49332] (17 PDB entries)
    1. Domains for 1cb4:
      1. 658117Domain d1cb4a_: 1cb4 A: [22236]
      2. 658118Domain d1cb4b_: 1cb4 B: [22237]
        complexed with cu, zn; mutant
    2. Domains for 1cbj:
      1. 658093Domain d1cbja_: 1cbj A: [22213]
      2. 658094Domain d1cbjb_: 1cbj B: [22214]
        complexed with cu, zn; mutant
    3. Domains for 1cob:
      1. 658115Domain d1coba_: 1cob A: [22233]
      2. 658116Domain d1cobb_: 1cob B: [22234]
        complexed with co, cu; mutant
    4. Domains for 1e9o:
      1. 658105Domain d1e9oa_: 1e9o A: [22227]
      2. 658106Domain d1e9ob_: 1e9o B: [22228]
        complexed with cu; mutant
    5. Domains for 1e9p:
      1. 658095Domain d1e9pa_: 1e9p A: [22215]
      2. 658096Domain d1e9pb_: 1e9p B: [22216]
        complexed with cu, zn; mutant
    6. Domains for 1e9q:
      1. 658097Domain d1e9qa_: 1e9q A: [22217]
      2. 658098Domain d1e9qb_: 1e9q B: [22218]
        complexed with cu, zn; mutant
    7. Domains for 1q0e:
      1. 658091Domain d1q0ea_: 1q0e A: [95504]
      2. 658092Domain d1q0eb_: 1q0e B: [95505]
        complexed with ace, cu, zn
    8. Domains for 1sda:
      1. 658123Domain d1sdab_: 1sda B: [22238]
      2. 658124Domain d1sdag_: 1sda G: [22239]
      3. 658125Domain d1sdao_: 1sda O: [22240]
      4. 658126Domain d1sday_: 1sda Y: [22241]
        complexed with cu, no2, zn; mutant
    9. Domains for 1sxa:
      1. 658107Domain d1sxaa_: 1sxa A: [22223]
      2. 658108Domain d1sxab_: 1sxa B: [22224]
        complexed with cu, zn; mutant
    10. Domains for 1sxb:
      1. 658101Domain d1sxba_: 1sxb A: [22221]
      2. 658102Domain d1sxbb_: 1sxb B: [22222]
        complexed with cu, zn; mutant
    11. Domains for 1sxc:
      1. 658099Domain d1sxca_: 1sxc A: [22219]
      2. 658100Domain d1sxcb_: 1sxc B: [22220]
        complexed with cu, zn; mutant
    12. Domains for 1sxn:
      1. 658109Domain d1sxna_: 1sxn A: [22225]
      2. 658110Domain d1sxnb_: 1sxn B: [22226]
        complexed with ca, cu, zn; mutant
    13. Domains for 1sxs:
      1. 658111Domain d1sxsa_: 1sxs A: [22231]
      2. 658112Domain d1sxsb_: 1sxs B: [22232]
        complexed with ium, scn; mutant
    14. Domains for 1sxz:
      1. 658113Domain d1sxza_: 1sxz A: [22229]
      2. 658114Domain d1sxzb_: 1sxz B: [22230]
        complexed with ium, nnn; mutant
    15. Domains for 2aeo:
      1. 658103Domain d2aeoa1: 2aeo A:1-151 [126637]
        automatically matched to d1cbja_
        complexed with cu, ncp, zn
      2. 658104Domain d2aeob1: 2aeo B:1-151 [126638]
        automatically matched to d1cbja_
        complexed with cu, ncp, zn
    16. Domains for 2sod:
      1. 658127Domain d2sodb_: 2sod B: [22242]
      2. 658128Domain d2sodg_: 2sod G: [22243]
      3. 658129Domain d2sodo_: 2sod O: [22244]
      4. 658130Domain d2sody_: 2sod Y: [22245]
        complexed with cu, zn; mutant
    17. Domains for 3sod:
      1. 658119Domain d3sodb_: 3sod B: [118679]
      2. 658120Domain d3sodg_: 3sod G: [118680]
      3. 658121Domain d3sodo_: 3sod O: [22235]
        complexed with cu, zn; mutant
      4. 658122Domain d3sody_: 3sod Y: [118681]
        complexed with cu, zn; mutant
  6. 658131Escherichia coli [TaxId:562] [49338] (1 PDB entry)
    Monomeric enzyme
  7. 658133Human (Homo sapiens) [TaxId:9606] [49333] (27 PDB entries)
    1. Domains for 1azv:
      1. 658189Domain d1azva_: 1azv A: [22247]
      2. 658190Domain d1azvb_: 1azv B: [22248]
        complexed with cu, zn; mutant
    2. Domain for 1ba9:
    3. Domain for 1dsw:
    4. Domains for 1fun:
      1. 658229Domain d1funa_: 1fun A: [22259]
      2. 658230Domain d1funb_: 1fun B: [22260]
      3. 658231Domain d1func_: 1fun C: [22261]
      4. 658232Domain d1fund_: 1fun D: [22262]
      5. 658233Domain d1fune_: 1fun E: [22263]
      6. 658234Domain d1funf_: 1fun F: [22264]
      7. 658235Domain d1fung_: 1fun G: [22265]
      8. 658236Domain d1funh_: 1fun H: [22266]
      9. 658237Domain d1funi_: 1fun I: [22267]
      10. 658238Domain d1funj_: 1fun J: [22268]
        complexed with cu, so4, zn; mutant
    5. Domains for 1hl4:
      1. 658191Domain d1hl4a_: 1hl4 A: [83587]
      2. 658192Domain d1hl4b_: 1hl4 B: [83588]
      3. 658193Domain d1hl4c_: 1hl4 C: [83589]
      4. 658194Domain d1hl4d_: 1hl4 D: [83590]
        complexed with ace, zn; mutant
    6. Domains for 1hl5:
      1. 658169Domain d1hl5a_: 1hl5 A: [83591]
      2. 658170Domain d1hl5b_: 1hl5 B: [83592]
      3. 658171Domain d1hl5c_: 1hl5 C: [83593]
      4. 658172Domain d1hl5d_: 1hl5 D: [83594]
      5. 658173Domain d1hl5e_: 1hl5 E: [83595]
      6. 658174Domain d1hl5f_: 1hl5 F: [83596]
      7. 658175Domain d1hl5g_: 1hl5 G: [83597]
      8. 658176Domain d1hl5h_: 1hl5 H: [83598]
      9. 658177Domain d1hl5i_: 1hl5 I: [83599]
      10. 658178Domain d1hl5j_: 1hl5 J: [83600]
      11. 658179Domain d1hl5k_: 1hl5 K: [83601]
      12. 658180Domain d1hl5l_: 1hl5 L: [83602]
      13. 658181Domain d1hl5m_: 1hl5 M: [83603]
      14. 658182Domain d1hl5n_: 1hl5 N: [83604]
      15. 658183Domain d1hl5o_: 1hl5 O: [83605]
      16. 658184Domain d1hl5p_: 1hl5 P: [83606]
      17. 658185Domain d1hl5q_: 1hl5 Q: [83607]
      18. 658186Domain d1hl5s_: 1hl5 S: [83608]
        complexed with ca, cu, zn; mutant
    7. Domain for 1kmg:
    8. Domains for 1l3n:
      1. 658241Domain d1l3na_: 1l3n A: [73549]
      2. 658242Domain d1l3nb_: 1l3n B: [73550]
        complexed with cu1, zn; mutant
    9. Domain for 1mfm:
    10. Domains for 1n18:
      1. 658247Domain d1n18a_: 1n18 A: [79785]
      2. 658248Domain d1n18b_: 1n18 B: [79786]
      3. 658249Domain d1n18c_: 1n18 C: [79787]
      4. 658250Domain d1n18d_: 1n18 D: [79788]
      5. 658251Domain d1n18e_: 1n18 E: [79789]
      6. 658252Domain d1n18f_: 1n18 F: [79790]
      7. 658253Domain d1n18g_: 1n18 G: [79791]
      8. 658254Domain d1n18h_: 1n18 H: [79792]
      9. 658255Domain d1n18i_: 1n18 I: [79793]
      10. 658256Domain d1n18j_: 1n18 J: [79794]
        thermostable mutant
    11. Domains for 1n19:
      1. 658187Domain d1n19a_: 1n19 A: [79795]
      2. 658188Domain d1n19b_: 1n19 B: [79796]
        complexed with cu1, so4, zn; mutant
    12. Domains for 1oez:
      1. 658207Domain d1oezw_: 1oez W: [86926]
      2. 658208Domain d1oezx_: 1oez X: [86927]
      3. 658209Domain d1oezy_: 1oez Y: [86928]
      4. 658210Domain d1oezz_: 1oez Z: [86929]
        complexed with so4, zn; mutant
    13. Domains for 1ozt:
      1. 658221Domain d1oztg_: 1ozt G: [87622]
      2. 658222Domain d1ozth_: 1ozt H: [87623]
      3. 658223Domain d1ozti_: 1ozt I: [87624]
      4. 658224Domain d1oztj_: 1ozt J: [87625]
      5. 658225Domain d1oztk_: 1ozt K: [87626]
      6. 658226Domain d1oztl_: 1ozt L: [87627]
      7. 658227Domain d1oztm_: 1ozt M: [87628]
      8. 658228Domain d1oztn_: 1ozt N: [87629]
        mutant
    14. Domains for 1ozu:
      1. 658142Domain d1ozua_: 1ozu A: [87630]
      2. 658143Domain d1ozub_: 1ozu B: [87631]
        complexed with csx, so4, zn; mutant
    15. Domains for 1p1v:
      1. 658144Domain d1p1va_: 1p1v A: [93900]
      2. 658145Domain d1p1vb_: 1p1v B: [93901]
      3. 658146Domain d1p1vc_: 1p1v C: [93902]
        complexed with so4, zn; mutant
    16. Domains for 1ptz:
      1. 658157Domain d1ptza_: 1ptz A: [95110]
      2. 658158Domain d1ptzb_: 1ptz B: [95111]
        complexed with cu1, so4, zn; mutant
    17. Domains for 1pu0:
      1. 658159Domain d1pu0a_: 1pu0 A: [95112]
      2. 658160Domain d1pu0b_: 1pu0 B: [95113]
      3. 658161Domain d1pu0c_: 1pu0 C: [95114]
      4. 658162Domain d1pu0d_: 1pu0 D: [95115]
      5. 658163Domain d1pu0e_: 1pu0 E: [95116]
      6. 658164Domain d1pu0f_: 1pu0 F: [95117]
      7. 658165Domain d1pu0g_: 1pu0 G: [95118]
      8. 658166Domain d1pu0h_: 1pu0 H: [95119]
      9. 658167Domain d1pu0i_: 1pu0 I: [95120]
      10. 658168Domain d1pu0j_: 1pu0 J: [95121]
        complexed with cu1, so4, zn
    18. Domain for 1rk7:
    19. Domains for 1sos:
      1. 658211Domain d1sosa_: 1sos A: [22249]
      2. 658212Domain d1sosb_: 1sos B: [22250]
      3. 658213Domain d1sosc_: 1sos C: [22251]
      4. 658214Domain d1sosd_: 1sos D: [22252]
      5. 658215Domain d1sose_: 1sos E: [22253]
      6. 658216Domain d1sosf_: 1sos F: [22254]
      7. 658217Domain d1sosg_: 1sos G: [22255]
      8. 658218Domain d1sosh_: 1sos H: [22256]
      9. 658219Domain d1sosi_: 1sos I: [22257]
      10. 658220Domain d1sosj_: 1sos J: [22258]
        complexed with cu, so4, zn; mutant
    20. Domains for 1spd:
      1. 658239Domain d1spda_: 1spd A: [22269]
      2. 658240Domain d1spdb_: 1spd B: [22270]
        complexed with cu, zn; mutant
    21. Domains for 1uxl:
      1. 658147Domain d1uxla_: 1uxl A: [100147]
      2. 658148Domain d1uxlb_: 1uxl B: [100148]
      3. 658149Domain d1uxlc_: 1uxl C: [100149]
      4. 658150Domain d1uxld_: 1uxl D: [100150]
      5. 658151Domain d1uxle_: 1uxl E: [100151]
      6. 658152Domain d1uxlf_: 1uxl F: [100152]
      7. 658153Domain d1uxlg_: 1uxl G: [100153]
      8. 658154Domain d1uxlh_: 1uxl H: [100154]
      9. 658155Domain d1uxli_: 1uxl I: [100155]
      10. 658156Domain d1uxlj_: 1uxl J: [100156]
        complexed with cu, so4, zn; mutant
    22. Domains for 1uxm:
      1. 658195Domain d1uxma_: 1uxm A: [100157]
      2. 658196Domain d1uxmb_: 1uxm B: [100158]
      3. 658197Domain d1uxmc_: 1uxm C: [100159]
      4. 658198Domain d1uxmd_: 1uxm D: [100160]
      5. 658199Domain d1uxme_: 1uxm E: [100161]
      6. 658200Domain d1uxmf_: 1uxm F: [100162]
      7. 658201Domain d1uxmg_: 1uxm G: [100163]
      8. 658202Domain d1uxmh_: 1uxm H: [100164]
      9. 658203Domain d1uxmi_: 1uxm I: [100165]
      10. 658204Domain d1uxmj_: 1uxm J: [100166]
      11. 658205Domain d1uxmk_: 1uxm K: [100167]
      12. 658206Domain d1uxml_: 1uxm L: [100168]
        complexed with cu, zn; mutant
    23. Domains for 2af2:
      1. 658244Domain d2af2a1: 2af2 A:1-153 [126652]
        automatically matched to d1l3na_
        complexed with zn; mutant
      2. 658245Domain d2af2b1: 2af2 B:1-153 [126653]
        automatically matched to d1l3na_
        complexed with zn; mutant
    24. Domains for 2c9s:
      1. 658140Domain d2c9sa1: 2c9s A:1-153 [130139]
        automatically matched to d1hl4a_
        complexed with act, so4, zn
      2. 658141Domain d2c9sf1: 2c9s F:1-153 [130140]
        automatically matched to d1hl4a_
        complexed with act, so4, zn
    25. Domains for 2c9u:
      1. 658138Domain d2c9ua1: 2c9u A:1-153 [130141]
        automatically matched to d1hl4a_
        complexed with act, cu, so4, zn
      2. 658139Domain d2c9uf1: 2c9u F:1-153 [130142]
        automatically matched to d1hl4a_
        complexed with act, cu, so4, zn
    26. Domains for 2c9v:
      1. 658134Domain d2c9va1: 2c9v A:1-153 [130143]
        automatically matched to d1hl4a_
        complexed with cu, na, so4, zn
      2. 658135Domain d2c9vf1: 2c9v F:1-153 [130144]
        automatically matched to d1hl4a_
        complexed with cu, na, so4, zn
    27. Domains for 2v0a:
      1. 658136Domain d2v0aa1: 2v0a A:1-153 [140048]
        automatically matched to d1hl4a_
        complexed with act, cu, so4, zn
      2. 658137Domain d2v0af1: 2v0a F:1-153 [140049]
        automatically matched to d1hl4a_
        complexed with act, cu, so4, zn
  8. 658260Mycobacterium tuberculosis [TaxId:1773] [110065] (1 PDB entry)
  9. 658262Photobacterium leiognathi [TaxId:658] [49337] (9 PDB entries)
    1. Domain for 1bzo:
    2. Domain for 1ib5:
    3. Domain for 1ibb:
    4. Domain for 1ibd:
    5. Domain for 1ibf:
    6. Domain for 1ibh:
    7. Domain for 1oaj:
    8. Domain for 1oal:
    9. Domains for 1yai:
      1. 658265Domain d1yaia_: 1yai A: [22289]
      2. 658266Domain d1yaib_: 1yai B: [22290]
      3. 658267Domain d1yaic_: 1yai C: [22291]
        complexed with cu, zn; mutant
  10. 658274Salmonella typhimurium [TaxId:90371] [49339] (1 PDB entry)
  11. 658279Spinach (Spinacia oleracea) [TaxId:3562] [49335] (1 PDB entry)

More info for Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like

Timeline for Protein Cu,Zn superoxide dismutase, SOD from b.1.8.1: Cu,Zn superoxide dismutase-like: