Lineage for Species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2352459Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2373287Superfamily b.1.5: Transglutaminase, two C-terminal domains [49309] (2 families) (S)
    automatically mapped to Pfam PF00927
  5. 2373288Family b.1.5.1: Transglutaminase, two C-terminal domains [49310] (1 protein)
  6. 2373289Protein Transglutaminase, two C-terminal domains [49311] (4 species)
    duplication
  7. 2373290Species Human (Homo sapiens), blood isozyme [TaxId:9606] [49312] (9 PDB entries)
    Coagulation factor XIII,

PDB entries in Species: Human (Homo sapiens), blood isozyme [TaxId: 9606]:

  1. Domain(s) for 1bl2:
    1. 2373303Domain d1bl2a3: 1bl2 A:517-627 [302233]
      Other proteins in same PDB: d1bl2a1, d1bl2a2, d1bl2b1, d1bl2b2
      automated match to d1f13a2
      complexed with sr
    2. 2373304Domain d1bl2a4: 1bl2 A:628-727 [302234]
      Other proteins in same PDB: d1bl2a1, d1bl2a2, d1bl2b1, d1bl2b2
      automated match to d1f13a3
      complexed with sr
    3. 2373305Domain d1bl2b3: 1bl2 B:516-627 [302237]
      Other proteins in same PDB: d1bl2a1, d1bl2a2, d1bl2b1, d1bl2b2
      automated match to d1f13a2
      complexed with sr
    4. 2373306Domain d1bl2b4: 1bl2 B:628-727 [302238]
      Other proteins in same PDB: d1bl2a1, d1bl2a2, d1bl2b1, d1bl2b2
      automated match to d1f13a3
      complexed with sr
  2. Domain(s) for 1evu:
    1. 2373295Domain d1evua2: 1evu A:516-627 [22175]
      Other proteins in same PDB: d1evua1, d1evua4, d1evub1, d1evub4
      complexed with ca, pgo
    2. 2373296Domain d1evua3: 1evu A:628-727 [22176]
      Other proteins in same PDB: d1evua1, d1evua4, d1evub1, d1evub4
      complexed with ca, pgo
    3. 2373297Domain d1evub2: 1evu B:515-627 [22177]
      Other proteins in same PDB: d1evua1, d1evua4, d1evub1, d1evub4
      complexed with ca, pgo
    4. 2373298Domain d1evub3: 1evu B:628-727 [22178]
      Other proteins in same PDB: d1evua1, d1evua4, d1evub1, d1evub4
      complexed with ca, pgo
  3. Domain(s) for 1ex0:
    1. 2373315Domain d1ex0a2: 1ex0 A:516-627 [90466]
      Other proteins in same PDB: d1ex0a1, d1ex0a4, d1ex0b1, d1ex0b4
      complexed with ca, pgo, po4; mutant
    2. 2373316Domain d1ex0a3: 1ex0 A:628-727 [90467]
      Other proteins in same PDB: d1ex0a1, d1ex0a4, d1ex0b1, d1ex0b4
      complexed with ca, pgo, po4; mutant
    3. 2373317Domain d1ex0b2: 1ex0 B:517-627 [90470]
      Other proteins in same PDB: d1ex0a1, d1ex0a4, d1ex0b1, d1ex0b4
      complexed with ca, pgo, po4; mutant
    4. 2373318Domain d1ex0b3: 1ex0 B:628-730 [90471]
      Other proteins in same PDB: d1ex0a1, d1ex0a4, d1ex0b1, d1ex0b4
      complexed with ca, pgo, po4; mutant
  4. Domain(s) for 1f13:
    1. 2373291Domain d1f13a2: 1f13 A:516-627 [22163]
      Other proteins in same PDB: d1f13a1, d1f13a4, d1f13b1, d1f13b4
    2. 2373292Domain d1f13a3: 1f13 A:628-728 [22164]
      Other proteins in same PDB: d1f13a1, d1f13a4, d1f13b1, d1f13b4
    3. 2373293Domain d1f13b2: 1f13 B:516-627 [22165]
      Other proteins in same PDB: d1f13a1, d1f13a4, d1f13b1, d1f13b4
    4. 2373294Domain d1f13b3: 1f13 B:628-728 [22166]
      Other proteins in same PDB: d1f13a1, d1f13a4, d1f13b1, d1f13b4
  5. Domain(s) for 1fie:
    1. 2373307Domain d1fiea2: 1fie A:516-627 [22167]
      Other proteins in same PDB: d1fiea1, d1fiea4, d1fieb1, d1fieb4
    2. 2373308Domain d1fiea3: 1fie A:628-727 [22168]
      Other proteins in same PDB: d1fiea1, d1fiea4, d1fieb1, d1fieb4
    3. 2373309Domain d1fieb2: 1fie B:516-627 [22169]
      Other proteins in same PDB: d1fiea1, d1fiea4, d1fieb1, d1fieb4
    4. 2373310Domain d1fieb3: 1fie B:628-727 [22170]
      Other proteins in same PDB: d1fiea1, d1fiea4, d1fieb1, d1fieb4
  6. Domain(s) for 1ggt:
    1. 2373323Domain d1ggta2: 1ggt A:516-627 [22171]
      Other proteins in same PDB: d1ggta1, d1ggta4, d1ggtb1, d1ggtb4
    2. 2373324Domain d1ggta3: 1ggt A:628-729 [22172]
      Other proteins in same PDB: d1ggta1, d1ggta4, d1ggtb1, d1ggtb4
    3. 2373325Domain d1ggtb2: 1ggt B:516-627 [22173]
      Other proteins in same PDB: d1ggta1, d1ggta4, d1ggtb1, d1ggtb4
    4. 2373326Domain d1ggtb3: 1ggt B:628-727 [22174]
      Other proteins in same PDB: d1ggta1, d1ggta4, d1ggtb1, d1ggtb4
  7. Domain(s) for 1ggu:
    1. 2373299Domain d1ggua2: 1ggu A:516-627 [22179]
      Other proteins in same PDB: d1ggua1, d1ggua4, d1ggub1, d1ggub4
      complexed with ca
    2. 2373300Domain d1ggua3: 1ggu A:628-727 [22180]
      Other proteins in same PDB: d1ggua1, d1ggua4, d1ggub1, d1ggub4
      complexed with ca
    3. 2373301Domain d1ggub2: 1ggu B:516-627 [22181]
      Other proteins in same PDB: d1ggua1, d1ggua4, d1ggub1, d1ggub4
      complexed with ca
    4. 2373302Domain d1ggub3: 1ggu B:628-727 [22182]
      Other proteins in same PDB: d1ggua1, d1ggua4, d1ggub1, d1ggub4
      complexed with ca
  8. Domain(s) for 1ggy:
    1. 2373311Domain d1ggya2: 1ggy A:516-627 [22183]
      Other proteins in same PDB: d1ggya1, d1ggya4, d1ggyb1, d1ggyb4
      complexed with yb
    2. 2373312Domain d1ggya3: 1ggy A:628-727 [22184]
      Other proteins in same PDB: d1ggya1, d1ggya4, d1ggyb1, d1ggyb4
      complexed with yb
    3. 2373313Domain d1ggyb2: 1ggy B:516-627 [22185]
      Other proteins in same PDB: d1ggya1, d1ggya4, d1ggyb1, d1ggyb4
      complexed with yb
    4. 2373314Domain d1ggyb3: 1ggy B:628-727 [22186]
      Other proteins in same PDB: d1ggya1, d1ggya4, d1ggyb1, d1ggyb4
      complexed with yb
  9. Domain(s) for 1qrk:
    1. 2373319Domain d1qrka2: 1qrk A:517-627 [22187]
      Other proteins in same PDB: d1qrka1, d1qrka4, d1qrkb1, d1qrkb4
      complexed with sr
    2. 2373320Domain d1qrka3: 1qrk A:628-727 [22188]
      Other proteins in same PDB: d1qrka1, d1qrka4, d1qrkb1, d1qrkb4
      complexed with sr
    3. 2373321Domain d1qrkb2: 1qrk B:516-627 [22189]
      Other proteins in same PDB: d1qrka1, d1qrka4, d1qrkb1, d1qrkb4
      complexed with sr
    4. 2373322Domain d1qrkb3: 1qrk B:628-727 [22190]
      Other proteins in same PDB: d1qrka1, d1qrka4, d1qrkb1, d1qrkb4
      complexed with sr

More info for Species Human (Homo sapiens), blood isozyme [TaxId:9606] from b.1.5.1 Transglutaminase, two C-terminal domains

Timeline for Species Human (Homo sapiens), blood isozyme [TaxId:9606] from b.1.5.1 Transglutaminase, two C-terminal domains: