SCOPe 2.07: Species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Lineage for Species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

Root: SCOPe 2.07
Class b: All beta proteins [48724] (178 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.5: Transglutaminase, two C-terminal domains [49309] (2 families)
automatically mapped to Pfam PF00927
Family b.1.5.1: Transglutaminase, two C-terminal domains [49310] (1 protein)
Protein Transglutaminase, two C-terminal domains [49311] (4 species)
duplication
Species Human (Homo sapiens), blood isozyme [TaxId:9606] [49312] (9 PDB entries)
Coagulation factor XIII,

PDB entries in Species: Human (Homo sapiens), blood isozyme [TaxId: 9606]:

Domain(s) for 1bl2:
1. Domain d1bl2a3: 1bl2 A:517-627 [302233]
  Other proteins in same PDB: d1bl2a1, d1bl2a2, d1bl2b1, d1bl2b2
  automated match to d1f13a2
  complexed with sr
2. Domain d1bl2a4: 1bl2 A:628-727 [302234]
  Other proteins in same PDB: d1bl2a1, d1bl2a2, d1bl2b1, d1bl2b2
  automated match to d1f13a3
  complexed with sr
3. Domain d1bl2b3: 1bl2 B:516-627 [302237]
  Other proteins in same PDB: d1bl2a1, d1bl2a2, d1bl2b1, d1bl2b2
  automated match to d1f13a2
  complexed with sr
4. Domain d1bl2b4: 1bl2 B:628-727 [302238]
  Other proteins in same PDB: d1bl2a1, d1bl2a2, d1bl2b1, d1bl2b2
  automated match to d1f13a3
  complexed with sr
Domain(s) for 1evu:
1. Domain d1evua2: 1evu A:516-627 [22175]
  Other proteins in same PDB: d1evua1, d1evua4, d1evub1, d1evub4
  complexed with ca, pgo
2. Domain d1evua3: 1evu A:628-727 [22176]
  Other proteins in same PDB: d1evua1, d1evua4, d1evub1, d1evub4
  complexed with ca, pgo
3. Domain d1evub2: 1evu B:515-627 [22177]
  Other proteins in same PDB: d1evua1, d1evua4, d1evub1, d1evub4
  complexed with ca, pgo
4. Domain d1evub3: 1evu B:628-727 [22178]
  Other proteins in same PDB: d1evua1, d1evua4, d1evub1, d1evub4
  complexed with ca, pgo
Domain(s) for 1ex0:
1. Domain d1ex0a2: 1ex0 A:516-627 [90466]
  Other proteins in same PDB: d1ex0a1, d1ex0a4, d1ex0b1, d1ex0b4
  complexed with ca, pgo, po4; mutant
2. Domain d1ex0a3: 1ex0 A:628-727 [90467]
  Other proteins in same PDB: d1ex0a1, d1ex0a4, d1ex0b1, d1ex0b4
  complexed with ca, pgo, po4; mutant
3. Domain d1ex0b2: 1ex0 B:517-627 [90470]
  Other proteins in same PDB: d1ex0a1, d1ex0a4, d1ex0b1, d1ex0b4
  complexed with ca, pgo, po4; mutant
4. Domain d1ex0b3: 1ex0 B:628-730 [90471]
  Other proteins in same PDB: d1ex0a1, d1ex0a4, d1ex0b1, d1ex0b4
  complexed with ca, pgo, po4; mutant
Domain(s) for 1f13:
1. Domain d1f13a2: 1f13 A:516-627 [22163]
  Other proteins in same PDB: d1f13a1, d1f13a4, d1f13b1, d1f13b4
2. Domain d1f13a3: 1f13 A:628-728 [22164]
  Other proteins in same PDB: d1f13a1, d1f13a4, d1f13b1, d1f13b4
3. Domain d1f13b2: 1f13 B:516-627 [22165]
  Other proteins in same PDB: d1f13a1, d1f13a4, d1f13b1, d1f13b4
4. Domain d1f13b3: 1f13 B:628-728 [22166]
  Other proteins in same PDB: d1f13a1, d1f13a4, d1f13b1, d1f13b4
Domain(s) for 1fie:
1. Domain d1fiea2: 1fie A:516-627 [22167]
  Other proteins in same PDB: d1fiea1, d1fiea4, d1fieb1, d1fieb4
2. Domain d1fiea3: 1fie A:628-727 [22168]
  Other proteins in same PDB: d1fiea1, d1fiea4, d1fieb1, d1fieb4
3. Domain d1fieb2: 1fie B:516-627 [22169]
  Other proteins in same PDB: d1fiea1, d1fiea4, d1fieb1, d1fieb4
4. Domain d1fieb3: 1fie B:628-727 [22170]
  Other proteins in same PDB: d1fiea1, d1fiea4, d1fieb1, d1fieb4
Domain(s) for 1ggt:
1. Domain d1ggta2: 1ggt A:516-627 [22171]
  Other proteins in same PDB: d1ggta1, d1ggta4, d1ggtb1, d1ggtb4
2. Domain d1ggta3: 1ggt A:628-729 [22172]
  Other proteins in same PDB: d1ggta1, d1ggta4, d1ggtb1, d1ggtb4
3. Domain d1ggtb2: 1ggt B:516-627 [22173]
  Other proteins in same PDB: d1ggta1, d1ggta4, d1ggtb1, d1ggtb4
4. Domain d1ggtb3: 1ggt B:628-727 [22174]
  Other proteins in same PDB: d1ggta1, d1ggta4, d1ggtb1, d1ggtb4
Domain(s) for 1ggu:
1. Domain d1ggua2: 1ggu A:516-627 [22179]
  Other proteins in same PDB: d1ggua1, d1ggua4, d1ggub1, d1ggub4
  complexed with ca
2. Domain d1ggua3: 1ggu A:628-727 [22180]
  Other proteins in same PDB: d1ggua1, d1ggua4, d1ggub1, d1ggub4
  complexed with ca
3. Domain d1ggub2: 1ggu B:516-627 [22181]
  Other proteins in same PDB: d1ggua1, d1ggua4, d1ggub1, d1ggub4
  complexed with ca
4. Domain d1ggub3: 1ggu B:628-727 [22182]
  Other proteins in same PDB: d1ggua1, d1ggua4, d1ggub1, d1ggub4
  complexed with ca
Domain(s) for 1ggy:
1. Domain d1ggya2: 1ggy A:516-627 [22183]
  Other proteins in same PDB: d1ggya1, d1ggya4, d1ggyb1, d1ggyb4
  complexed with yb
2. Domain d1ggya3: 1ggy A:628-727 [22184]
  Other proteins in same PDB: d1ggya1, d1ggya4, d1ggyb1, d1ggyb4
  complexed with yb
3. Domain d1ggyb2: 1ggy B:516-627 [22185]
  Other proteins in same PDB: d1ggya1, d1ggya4, d1ggyb1, d1ggyb4
  complexed with yb
4. Domain d1ggyb3: 1ggy B:628-727 [22186]
  Other proteins in same PDB: d1ggya1, d1ggya4, d1ggyb1, d1ggyb4
  complexed with yb
Domain(s) for 1qrk:
1. Domain d1qrka2: 1qrk A:517-627 [22187]
  Other proteins in same PDB: d1qrka1, d1qrka4, d1qrkb1, d1qrkb4
  complexed with sr
2. Domain d1qrka3: 1qrk A:628-727 [22188]
  Other proteins in same PDB: d1qrka1, d1qrka4, d1qrkb1, d1qrkb4
  complexed with sr
3. Domain d1qrkb2: 1qrk B:516-627 [22189]
  Other proteins in same PDB: d1qrka1, d1qrka4, d1qrkb1, d1qrkb4
  complexed with sr
4. Domain d1qrkb3: 1qrk B:628-727 [22190]
  Other proteins in same PDB: d1qrka1, d1qrka4, d1qrkb1, d1qrkb4
  complexed with sr

More info for Species Human (Homo sapiens), blood isozyme [TaxId:9606] from b.1.5.1 Transglutaminase, two C-terminal domains

Timeline for Species Human (Homo sapiens), blood isozyme [TaxId:9606] from b.1.5.1 Transglutaminase, two C-terminal domains:

Species Human (Homo sapiens), blood isozyme [TaxId:9606] from b.1.5.1 Transglutaminase, two C-terminal domains first appeared (with stable ids) in SCOP 1.55, called Species Human (Homo sapiens), blood [TaxId:9606] from b.1.5.1 Coagulation factor XIII, two C-terminal domains
Species Human (Homo sapiens), blood isozyme [TaxId:9606] from b.1.5.1 Transglutaminase, two C-terminal domains appears in SCOPe 2.06
Species Human (Homo sapiens), blood isozyme [TaxId:9606] from b.1.5.1 Transglutaminase, two C-terminal domains appears in the current release, SCOPe 2.08