Lineage for Species: Human (Homo sapiens), blood isozyme [TaxId: 9606]

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2739517Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2765063Superfamily b.1.18: E set domains [81296] (27 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2765693Family b.1.18.9: Transglutaminase N-terminal domain [81289] (1 protein)
  6. 2765694Protein Transglutaminase N-terminal domain [49235] (4 species)
    elaborated with many loop insertions in the common fold
  7. 2765695Species Human (Homo sapiens), blood isozyme [TaxId:9606] [49236] (9 PDB entries)
    Coagulation factor XIII

PDB entries in Species: Human (Homo sapiens), blood isozyme [TaxId: 9606]:

  1. Domain(s) for 1bl2:
    1. 2765702Domain d1bl2a1: 1bl2 A:9-190 [302231]
      Other proteins in same PDB: d1bl2a2, d1bl2a3, d1bl2a4, d1bl2b2, d1bl2b3, d1bl2b4
      automated match to d1f13a1
      complexed with sr
    2. 2765703Domain d1bl2b1: 1bl2 B:10-190 [302235]
      Other proteins in same PDB: d1bl2a2, d1bl2a3, d1bl2a4, d1bl2b2, d1bl2b3, d1bl2b4
      automated match to d1f13a1
      complexed with sr
  2. Domain(s) for 1evu:
    1. 2765698Domain d1evua1: 1evu A:1-190 [21883]
      Other proteins in same PDB: d1evua2, d1evua3, d1evua4, d1evub2, d1evub3, d1evub4
      complexed with ca, pgo
    2. 2765699Domain d1evub1: 1evu B:8-190 [21884]
      Other proteins in same PDB: d1evua2, d1evua3, d1evua4, d1evub2, d1evub3, d1evub4
      complexed with ca, pgo
  3. Domain(s) for 1ex0:
    1. 2765706Domain d1ex0a1: 1ex0 A:7-190 [90465]
      Other proteins in same PDB: d1ex0a2, d1ex0a3, d1ex0a4, d1ex0b2, d1ex0b3, d1ex0b4
      complexed with ca, pgo, po4; mutant
    2. 2765707Domain d1ex0b1: 1ex0 B:5-190 [90469]
      Other proteins in same PDB: d1ex0a2, d1ex0a3, d1ex0a4, d1ex0b2, d1ex0b3, d1ex0b4
      complexed with ca, pgo, po4; mutant
  4. Domain(s) for 1f13:
    1. 2765696Domain d1f13a1: 1f13 A:5-190 [21877]
      Other proteins in same PDB: d1f13a2, d1f13a3, d1f13a4, d1f13b2, d1f13b3, d1f13b4
    2. 2765697Domain d1f13b1: 1f13 B:6-190 [21878]
      Other proteins in same PDB: d1f13a2, d1f13a3, d1f13a4, d1f13b2, d1f13b3, d1f13b4
  5. Domain(s) for 1fie:
    1. 2765704Domain d1fiea1: 1fie A:9-190 [21879]
      Other proteins in same PDB: d1fiea2, d1fiea3, d1fiea4, d1fieb2, d1fieb3, d1fieb4
    2. 2765705Domain d1fieb1: 1fie B:10-190 [21880]
      Other proteins in same PDB: d1fiea2, d1fiea3, d1fiea4, d1fieb2, d1fieb3, d1fieb4
  6. Domain(s) for 1ggt:
    1. 2765712Domain d1ggta1: 1ggt A:8-190 [21881]
      Other proteins in same PDB: d1ggta2, d1ggta3, d1ggta4, d1ggtb2, d1ggtb3, d1ggtb4
    2. 2765713Domain d1ggtb1: 1ggt B:8-190 [21882]
      Other proteins in same PDB: d1ggta2, d1ggta3, d1ggta4, d1ggtb2, d1ggtb3, d1ggtb4
  7. Domain(s) for 1ggu:
    1. 2765700Domain d1ggua1: 1ggu A:8-190 [21885]
      Other proteins in same PDB: d1ggua2, d1ggua3, d1ggua4, d1ggub2, d1ggub3, d1ggub4
      complexed with ca
    2. 2765701Domain d1ggub1: 1ggu B:8-190 [21886]
      Other proteins in same PDB: d1ggua2, d1ggua3, d1ggua4, d1ggub2, d1ggub3, d1ggub4
      complexed with ca
  8. Domain(s) for 1ggy:
    1. 2765708Domain d1ggya1: 1ggy A:8-190 [21887]
      Other proteins in same PDB: d1ggya2, d1ggya3, d1ggya4, d1ggyb2, d1ggyb3, d1ggyb4
      complexed with yb
    2. 2765709Domain d1ggyb1: 1ggy B:8-190 [21888]
      Other proteins in same PDB: d1ggya2, d1ggya3, d1ggya4, d1ggyb2, d1ggyb3, d1ggyb4
      complexed with yb
  9. Domain(s) for 1qrk:
    1. 2765710Domain d1qrka1: 1qrk A:9-190 [21889]
      Other proteins in same PDB: d1qrka2, d1qrka3, d1qrka4, d1qrkb2, d1qrkb3, d1qrkb4
      complexed with sr
    2. 2765711Domain d1qrkb1: 1qrk B:10-190 [21890]
      Other proteins in same PDB: d1qrka2, d1qrka3, d1qrka4, d1qrkb2, d1qrkb3, d1qrkb4
      complexed with sr

More info for Species Human (Homo sapiens), blood isozyme [TaxId:9606] from b.1.18.9 Transglutaminase N-terminal domain

Timeline for Species Human (Homo sapiens), blood isozyme [TaxId:9606] from b.1.18.9 Transglutaminase N-terminal domain: