Lineage for Protein: Transglutaminase N-terminal domain

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2017115Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2032114Superfamily b.1.18: E set domains [81296] (24 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 2032683Family b.1.18.9: Transglutaminase N-terminal domain [81289] (1 protein)
  6. 2032684Protein Transglutaminase N-terminal domain [49235] (4 species)
    elaborated with many loop insertions in the common fold

Species:

  1. 2032685Human (Homo sapiens), blood isozyme [TaxId:9606] [49236] (9 PDB entries)
    Coagulation factor XIII
    1. Domains for 1bl2:
      1. 2032694Domain d1bl2a1: 1bl2 A:9-190 [302231]
        Other proteins in same PDB: d1bl2a2, d1bl2a3, d1bl2a4, d1bl2b2, d1bl2b3, d1bl2b4
        automated match to d1f13a1
        complexed with sr
      2. 2032695Domain d1bl2b1: 1bl2 B:10-190 [302235]
        Other proteins in same PDB: d1bl2a2, d1bl2a3, d1bl2a4, d1bl2b2, d1bl2b3, d1bl2b4
        automated match to d1f13a1
        complexed with sr
    2. Domains for 1evu:
      1. 2032690Domain d1evua1: 1evu A:1-190 [21883]
        Other proteins in same PDB: d1evua2, d1evua3, d1evua4, d1evub2, d1evub3, d1evub4
        complexed with ca, pgo
      2. 2032691Domain d1evub1: 1evu B:8-190 [21884]
        Other proteins in same PDB: d1evua2, d1evua3, d1evua4, d1evub2, d1evub3, d1evub4
        complexed with ca, pgo
    3. Domains for 1ex0:
      1. 2032686Domain d1ex0a1: 1ex0 A:7-190 [90465]
        Other proteins in same PDB: d1ex0a2, d1ex0a3, d1ex0a4, d1ex0b2, d1ex0b3, d1ex0b4
        complexed with ca, pgo, po4; mutant
      2. 2032687Domain d1ex0b1: 1ex0 B:5-190 [90469]
        Other proteins in same PDB: d1ex0a2, d1ex0a3, d1ex0a4, d1ex0b2, d1ex0b3, d1ex0b4
        complexed with ca, pgo, po4; mutant
    4. Domains for 1f13:
      1. 2032688Domain d1f13a1: 1f13 A:5-190 [21877]
        Other proteins in same PDB: d1f13a2, d1f13a3, d1f13a4, d1f13b2, d1f13b3, d1f13b4
      2. 2032689Domain d1f13b1: 1f13 B:6-190 [21878]
        Other proteins in same PDB: d1f13a2, d1f13a3, d1f13a4, d1f13b2, d1f13b3, d1f13b4
    5. Domains for 1fie:
      1. 2032698Domain d1fiea1: 1fie A:9-190 [21879]
        Other proteins in same PDB: d1fiea2, d1fiea3, d1fiea4, d1fieb2, d1fieb3, d1fieb4
      2. 2032699Domain d1fieb1: 1fie B:10-190 [21880]
        Other proteins in same PDB: d1fiea2, d1fiea3, d1fiea4, d1fieb2, d1fieb3, d1fieb4
    6. Domains for 1ggt:
      1. 2032702Domain d1ggta1: 1ggt A:8-190 [21881]
        Other proteins in same PDB: d1ggta2, d1ggta3, d1ggta4, d1ggtb2, d1ggtb3, d1ggtb4
      2. 2032703Domain d1ggtb1: 1ggt B:8-190 [21882]
        Other proteins in same PDB: d1ggta2, d1ggta3, d1ggta4, d1ggtb2, d1ggtb3, d1ggtb4
    7. Domains for 1ggu:
      1. 2032692Domain d1ggua1: 1ggu A:8-190 [21885]
        Other proteins in same PDB: d1ggua2, d1ggua3, d1ggua4, d1ggub2, d1ggub3, d1ggub4
        complexed with ca
      2. 2032693Domain d1ggub1: 1ggu B:8-190 [21886]
        Other proteins in same PDB: d1ggua2, d1ggua3, d1ggua4, d1ggub2, d1ggub3, d1ggub4
        complexed with ca
    8. Domains for 1ggy:
      1. 2032700Domain d1ggya1: 1ggy A:8-190 [21887]
        Other proteins in same PDB: d1ggya2, d1ggya3, d1ggya4, d1ggyb2, d1ggyb3, d1ggyb4
        complexed with yb
      2. 2032701Domain d1ggyb1: 1ggy B:8-190 [21888]
        Other proteins in same PDB: d1ggya2, d1ggya3, d1ggya4, d1ggyb2, d1ggyb3, d1ggyb4
        complexed with yb
    9. Domains for 1qrk:
      1. 2032696Domain d1qrka1: 1qrk A:9-190 [21889]
        Other proteins in same PDB: d1qrka2, d1qrka3, d1qrka4, d1qrkb2, d1qrkb3, d1qrkb4
        complexed with sr
      2. 2032697Domain d1qrkb1: 1qrk B:10-190 [21890]
        Other proteins in same PDB: d1qrka2, d1qrka3, d1qrka4, d1qrkb2, d1qrkb3, d1qrkb4
        complexed with sr
  2. 2032704Human (Homo sapiens), TGase E3 [TaxId:9606] [74845] (9 PDB entries)
    1. Domains for 1l9m:
      1. 2032715Domain d1l9ma1: 1l9m A:1-140 [73732]
        Other proteins in same PDB: d1l9ma2, d1l9ma3, d1l9ma4, d1l9mb2, d1l9mb3, d1l9mb4
        complexed with br, ca, cl
      2. 2032716Domain d1l9mb1: 1l9m B:1-140 [73736]
        Other proteins in same PDB: d1l9ma2, d1l9ma3, d1l9ma4, d1l9mb2, d1l9mb3, d1l9mb4
        complexed with br, ca, cl
    2. Domains for 1l9n:
      1. 2032711Domain d1l9na1: 1l9n A:1-140 [73740]
        Other proteins in same PDB: d1l9na2, d1l9na3, d1l9na4, d1l9nb2, d1l9nb3, d1l9nb4
        complexed with bgl, ca, cl
      2. 2032712Domain d1l9nb1: 1l9n B:1-140 [73744]
        Other proteins in same PDB: d1l9na2, d1l9na3, d1l9na4, d1l9nb2, d1l9nb3, d1l9nb4
        complexed with bgl, ca, cl
    3. Domains for 1nud:
      1. 2032720Domain d1nuda1: 1nud A:1-140 [86174]
        Other proteins in same PDB: d1nuda2, d1nuda3, d1nuda4, d1nudb2, d1nudb3, d1nudb4
        complexed with br, ca, cl
      2. 2032721Domain d1nudb1: 1nud B:1-140 [86178]
        Other proteins in same PDB: d1nuda2, d1nuda3, d1nuda4, d1nudb2, d1nudb3, d1nudb4
        complexed with br, ca, cl
    4. Domain for 1nuf:
    5. Domains for 1nug:
      1. 2032717Domain d1nuga1: 1nug A:1-140 [86186]
        Other proteins in same PDB: d1nuga2, d1nuga3, d1nuga4, d1nugb2, d1nugb3, d1nugb4
        complexed with ca, cl, mg
      2. 2032718Domain d1nugb1: 1nug B:1-140 [86190]
        Other proteins in same PDB: d1nuga2, d1nuga3, d1nuga4, d1nugb2, d1nugb3, d1nugb4
        complexed with ca, cl, mg
    6. Domains for 1rle:
      1. 2032713Domain d1rlea5: 1rle A:1-140 [303002]
        Other proteins in same PDB: d1rlea6, d1rlea7, d1rlea8, d1rleb6, d1rleb7, d1rleb8
        automated match to d1l9ma1
        complexed with ca, gsp, mg
      2. 2032714Domain d1rleb5: 1rle B:1-140 [303006]
        Other proteins in same PDB: d1rlea6, d1rlea7, d1rlea8, d1rleb6, d1rleb7, d1rleb8
        automated match to d1l9mb1
        complexed with ca, gsp, mg
    7. Domains for 1rll:
      1. 2032707Domain d1rlla1: 1rll A:1-140 [303010]
        Other proteins in same PDB: d1rlla2, d1rlla3, d1rlla4, d1rllb2, d1rllb3, d1rllb4
        automated match to d1l9ma1
        complexed with ca, gsp, mg
      2. 2032708Domain d1rllb1: 1rll B:1-140 [303014]
        Other proteins in same PDB: d1rlla2, d1rlla3, d1rlla4, d1rllb2, d1rllb3, d1rllb4
        automated match to d1l9mb1
        complexed with ca, gsp, mg
    8. Domains for 1sgx:
      1. 2032709Domain d1sgxa5: 1sgx A:1-140 [303066]
        Other proteins in same PDB: d1sgxa6, d1sgxa7, d1sgxa8, d1sgxb6, d1sgxb7, d1sgxb8
        automated match to d1l9na1
        complexed with 5gp, ca, mg
      2. 2032710Domain d1sgxb5: 1sgx B:1-140 [303070]
        Other proteins in same PDB: d1sgxa6, d1sgxa7, d1sgxa8, d1sgxb6, d1sgxb7, d1sgxb8
        automated match to d1l9na1
        complexed with 5gp, ca, mg
    9. Domains for 1vjj:
      1. 2032705Domain d1vjja5: 1vjj A:1-140 [303235]
        Other proteins in same PDB: d1vjja6, d1vjja7, d1vjja8, d1vjjb6, d1vjjb7, d1vjjb8
        automated match to d1l9na1
        complexed with ca, cl, gdp, mg
      2. 2032706Domain d1vjjb5: 1vjj B:1-140 [303239]
        Other proteins in same PDB: d1vjja6, d1vjja7, d1vjja8, d1vjjb6, d1vjjb7, d1vjjb8
        automated match to d1l9na1
        complexed with ca, cl, gdp, mg
  3. 2032722Human (Homo sapiens), tissue isozyme [TaxId:9606] [74844] (4 PDB entries)
    GDP-binding protein
    1. Domains for 1kv3:
      1. 2032724Domain d1kv3a1: 1kv3 A:15-145 [73027]
        Other proteins in same PDB: d1kv3a2, d1kv3a3, d1kv3a4, d1kv3b2, d1kv3b3, d1kv3b4, d1kv3c2, d1kv3c3, d1kv3c4, d1kv3d2, d1kv3d3, d1kv3d4, d1kv3e2, d1kv3e3, d1kv3e4, d1kv3f2, d1kv3f3, d1kv3f4
        complexed with gdp
      2. 2032725Domain d1kv3b1: 1kv3 B:15-145 [73031]
        Other proteins in same PDB: d1kv3a2, d1kv3a3, d1kv3a4, d1kv3b2, d1kv3b3, d1kv3b4, d1kv3c2, d1kv3c3, d1kv3c4, d1kv3d2, d1kv3d3, d1kv3d4, d1kv3e2, d1kv3e3, d1kv3e4, d1kv3f2, d1kv3f3, d1kv3f4
        complexed with gdp
      3. 2032726Domain d1kv3c1: 1kv3 C:15-145 [73035]
        Other proteins in same PDB: d1kv3a2, d1kv3a3, d1kv3a4, d1kv3b2, d1kv3b3, d1kv3b4, d1kv3c2, d1kv3c3, d1kv3c4, d1kv3d2, d1kv3d3, d1kv3d4, d1kv3e2, d1kv3e3, d1kv3e4, d1kv3f2, d1kv3f3, d1kv3f4
        complexed with gdp
      4. 2032727Domain d1kv3d1: 1kv3 D:15-145 [73039]
        Other proteins in same PDB: d1kv3a2, d1kv3a3, d1kv3a4, d1kv3b2, d1kv3b3, d1kv3b4, d1kv3c2, d1kv3c3, d1kv3c4, d1kv3d2, d1kv3d3, d1kv3d4, d1kv3e2, d1kv3e3, d1kv3e4, d1kv3f2, d1kv3f3, d1kv3f4
        complexed with gdp
      5. 2032728Domain d1kv3e1: 1kv3 E:15-145 [73043]
        Other proteins in same PDB: d1kv3a2, d1kv3a3, d1kv3a4, d1kv3b2, d1kv3b3, d1kv3b4, d1kv3c2, d1kv3c3, d1kv3c4, d1kv3d2, d1kv3d3, d1kv3d4, d1kv3e2, d1kv3e3, d1kv3e4, d1kv3f2, d1kv3f3, d1kv3f4
        complexed with gdp
      6. 2032729Domain d1kv3f1: 1kv3 F:15-145 [73047]
        Other proteins in same PDB: d1kv3a2, d1kv3a3, d1kv3a4, d1kv3b2, d1kv3b3, d1kv3b4, d1kv3c2, d1kv3c3, d1kv3c4, d1kv3d2, d1kv3d3, d1kv3d4, d1kv3e2, d1kv3e3, d1kv3e4, d1kv3f2, d1kv3f3, d1kv3f4
        complexed with gdp
    2. Domain for 2q3z:
    3. Domains for 3ly6:
      1. 2032730Domain d3ly6a1: 3ly6 A:4-145 [247544]
        Other proteins in same PDB: d3ly6a2, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b2, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c2, d3ly6c3, d3ly6c4, d3ly6c5
        automated match to d2q3za1
        complexed with atp
      2. 2032731Domain d3ly6b1: 3ly6 B:4-145 [247548]
        Other proteins in same PDB: d3ly6a2, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b2, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c2, d3ly6c3, d3ly6c4, d3ly6c5
        automated match to d2q3za1
        complexed with atp
      3. 2032732Domain d3ly6c1: 3ly6 C:4-145 [247552]
        Other proteins in same PDB: d3ly6a2, d3ly6a3, d3ly6a4, d3ly6a5, d3ly6b2, d3ly6b3, d3ly6b4, d3ly6b5, d3ly6c2, d3ly6c3, d3ly6c4, d3ly6c5
        automated match to d2q3za1
        complexed with atp
    4. Domains for 4pyg:
      1. 2032733Domain d4pyga1: 4pyg A:4-145 [308019]
        Other proteins in same PDB: d4pyga2, d4pyga3, d4pyga4, d4pyga5, d4pygb2, d4pygb3, d4pygb4, d4pygb5, d4pyge2, d4pyge3, d4pyge4, d4pyge5
        automated match to d3ly6a1
        complexed with gtp
      2. 2032734Domain d4pygb1: 4pyg B:4-145 [308024]
        Other proteins in same PDB: d4pyga2, d4pyga3, d4pyga4, d4pyga5, d4pygb2, d4pygb3, d4pygb4, d4pygb5, d4pyge2, d4pyge3, d4pyge4, d4pyge5
        automated match to d3ly6a1
        complexed with gtp
      3. 2032735Domain d4pyge1: 4pyg E:4-145 [308029]
        Other proteins in same PDB: d4pyga2, d4pyga3, d4pyga4, d4pyga5, d4pygb2, d4pygb3, d4pygb4, d4pygb5, d4pyge2, d4pyge3, d4pyge4, d4pyge5
        automated match to d3ly6a1
        complexed with gtp
  4. 2032736Red sea bream (Chrysophrys major) [TaxId:143350] [63667] (1 PDB entry)

More info for Protein Transglutaminase N-terminal domain from b.1.18.9: Transglutaminase N-terminal domain

Timeline for Protein Transglutaminase N-terminal domain from b.1.18.9: Transglutaminase N-terminal domain: