SCOP 1.65: Protein: Cyclomaltodextrin glycanotransferase, domain D

Lineage for Protein: Cyclomaltodextrin glycanotransferase, domain D

Root: SCOP 1.65
Class b: All beta proteins [48724] (126 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.18: E set domains [81296] (18 families)
"Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies

Family b.1.18.2: E-set domains of sugar-utilizing enzymes [81282] (13 proteins)
domains of unknown function associated with different type of catalytic domains in a different sequential location
subgroup of the larger IPT/TIG domain family

Protein Cyclomaltodextrin glycanotransferase, domain D [49215] (4 species)
follows the starch-binding domain C; the catalytic domain A has (beta/alpha)8-barrel fold; family 13 glycosyl hydrolases

Species:

Bacillus circulans, different strains [TaxId:1397] [49216] (31 PDB entries)
1. Domain for 1cdg:
  - Domain d1cdg_1: 1cdg 496-581 [21816]
    Other proteins in same PDB: d1cdg_2, d1cdg_3, d1cdg_4
    complexed with ca, mal
2. Domain for 1cgt:
  - Domain d1cgt_1: 1cgt 495-579 [21815]
    Other proteins in same PDB: d1cgt_2, d1cgt_3, d1cgt_4
    complexed with ca
3. Domain for 1cgu:
  - Domain d1cgu_1: 1cgu 495-579 [21838]
    Other proteins in same PDB: d1cgu_2, d1cgu_3, d1cgu_4
    complexed with ca, glc; mutant
4. Domain for 1cgv:
  - Domain d1cgv_1: 1cgv 496-581 [21820]
    Other proteins in same PDB: d1cgv_2, d1cgv_3, d1cgv_4
    complexed with ca, mal; mutant
5. Domain for 1cgw:
  - Domain d1cgw_1: 1cgw 496-581 [21822]
    Other proteins in same PDB: d1cgw_2, d1cgw_3, d1cgw_4
    complexed with ca, mal; mutant
6. Domain for 1cgx:
  - Domain d1cgx_1: 1cgx 496-581 [21832]
    Other proteins in same PDB: d1cgx_2, d1cgx_3, d1cgx_4
    complexed with ca, mal; mutant
7. Domain for 1cgy:
  - Domain d1cgy_1: 1cgy 496-581 [21823]
    Other proteins in same PDB: d1cgy_2, d1cgy_3, d1cgy_4
    complexed with ca, mal; mutant
8. Domain for 1cxe:
  - Domain d1cxe_1: 1cxe 496-581 [21817]
    Other proteins in same PDB: d1cxe_2, d1cxe_3, d1cxe_4
    complexed with ca, glc, mal
9. Domain for 1cxf:
  - Domain d1cxf_1: 1cxf 496-581 [21841]
    Other proteins in same PDB: d1cxf_2, d1cxf_3, d1cxf_4
    complexed with acx, ca, glc, mal; mutant
10. Domain for 1cxh:
  - Domain d1cxh_1: 1cxh 496-581 [21821]
    Other proteins in same PDB: d1cxh_2, d1cxh_3, d1cxh_4
    complexed with ca, glc, mal
11. Domain for 1cxi:
  - Domain d1cxi_1: 1cxi 496-581 [21818]
    Other proteins in same PDB: d1cxi_2, d1cxi_3, d1cxi_4
    complexed with ca, mal
12. Domain for 1cxk:
  - Domain d1cxka1: 1cxk A:497-583 [21835]
    Other proteins in same PDB: d1cxka2, d1cxka3, d1cxka4
    complexed with ca, glc; mutant
13. Domain for 1cxl:
  - Domain d1cxla1: 1cxl A:497-583 [21829]
    Other proteins in same PDB: d1cxla2, d1cxla3, d1cxla4
    complexed with ca, g4d, glc, glf, mpd; mutant
14. Domain for 1d3c:
  - Domain d1d3ca1: 1d3c A:497-583 [21827]
    Other proteins in same PDB: d1d3ca2, d1d3ca3, d1d3ca4
15. Domain for 1dtu:
  - Domain d1dtua1: 1dtu A:497-583 [21840]
    Other proteins in same PDB: d1dtua2, d1dtua3, d1dtua4
    complexed with aci, ca, glc, gld; mutant
16. Domain for 1eo5:
  - Domain d1eo5a1: 1eo5 A:497-583 [21828]
    Other proteins in same PDB: d1eo5a2, d1eo5a3, d1eo5a4
    complexed with ca, glc, mpd; mutant
17. Domain for 1eo7:
  - Domain d1eo7a1: 1eo7 A:497-583 [21842]
    Other proteins in same PDB: d1eo7a2, d1eo7a3, d1eo7a4
    complexed with ca, glc; mutant
18. Domain for 1kck:
  - Domain d1kcka1: 1kck A:496-581 [68441]
    Other proteins in same PDB: d1kcka2, d1kcka3, d1kcka4
    complexed with adh, ca, glc, glw; mutant
19. Domain for 1kcl:
  - Domain d1kcla1: 1kcl A:496-581 [68445]
    Other proteins in same PDB: d1kcla2, d1kcla3, d1kcla4
    complexed with ca, glc, mal, mpd; mutant
20. Domain for 1ot1:
  - Domain d1ot1a1: 1ot1 A:496-581 [87392]
    Other proteins in same PDB: d1ot1a2, d1ot1a3, d1ot1a4
    complexed with acy, ca, epe, glc, mal, mpd; mutant
21. Domain for 1ot2:
  - Domain d1ot2a1: 1ot2 A:496-581 [87396]
    Other proteins in same PDB: d1ot2a2, d1ot2a3, d1ot2a4
    complexed with acy, ca, epe, glc, mal, mpd; mutant
22. Domains for 1tcm:
  1. Domain d1tcma1: 1tcm A:496-581 [21833]
    Other proteins in same PDB: d1tcma2, d1tcma3, d1tcma4, d1tcmb2, d1tcmb3, d1tcmb4
  2. Domain d1tcmb1: 1tcm B:496-581 [21834]
    Other proteins in same PDB: d1tcma2, d1tcma3, d1tcma4, d1tcmb2, d1tcmb3, d1tcmb4
    complexed with ca; mutant
23. Domain for 2cxg:
  - Domain d2cxg_1: 2cxg 496-581 [21839]
    Other proteins in same PDB: d2cxg_2, d2cxg_3, d2cxg_4
    complexed with aci, ca, glc, gld
24. Domain for 2dij:
  - Domain d2dij_1: 2dij 497-583 [21836]
    Other proteins in same PDB: d2dij_2, d2dij_3, d2dij_4
    complexed with aci, ca, glc, gld; mutant
25. Domain for 3cgt:
  - Domain d3cgt_1: 3cgt 496-581 [21819]
    Other proteins in same PDB: d3cgt_2, d3cgt_3, d3cgt_4
    complexed with bcd, ca; mutant
26. Domain for 4cgt:
  - Domain d4cgt_1: 4cgt 496-581 [21825]
    Other proteins in same PDB: d4cgt_2, d4cgt_3, d4cgt_4
    complexed with ca; mutant
27. Domain for 5cgt:
  - Domain d5cgt_1: 5cgt 496-581 [21824]
    Other proteins in same PDB: d5cgt_2, d5cgt_3, d5cgt_4
    complexed with ca, glc; mutant
28. Domain for 6cgt:
  - Domain d6cgt_1: 6cgt 495-579 [21837]
    Other proteins in same PDB: d6cgt_2, d6cgt_3, d6cgt_4
    complexed with ca, dag, glc, opg; mutant
29. Domain for 7cgt:
  - Domain d7cgt_1: 7cgt 496-581 [21826]
    Other proteins in same PDB: d7cgt_2, d7cgt_3, d7cgt_4
    complexed with ca; mutant
30. Domain for 8cgt:
  - Domain d8cgta1: 8cgt A:495-579 [21831]
    Other proteins in same PDB: d8cgta2, d8cgta3, d8cgta4
    complexed with ca, tm6; mutant
31. Domain for 9cgt:
  - Domain d9cgta1: 9cgt A:495-579 [21830]
    Other proteins in same PDB: d9cgta2, d9cgta3, d9cgta4
    complexed with ca, tm5; mutant
Bacillus sp., strain 1011 [TaxId:1409] [49219] (4 PDB entries)
1. Domains for 1d7f:
  1. Domain d1d7fa1: 1d7f A:497-582 [21848]
    Other proteins in same PDB: d1d7fa2, d1d7fa3, d1d7fa4, d1d7fb2, d1d7fb3, d1d7fb4
  2. Domain d1d7fb1: 1d7f B:497-582 [21849]
    Other proteins in same PDB: d1d7fa2, d1d7fa3, d1d7fa4, d1d7fb2, d1d7fb3, d1d7fb4
    complexed with ca; mutant
2. Domains for 1ded:
  1. Domain d1deda1: 1ded A:497-582 [21850]
    Other proteins in same PDB: d1deda2, d1deda3, d1deda4, d1dedb2, d1dedb3, d1dedb4
  2. Domain d1dedb1: 1ded B:497-582 [21851]
    Other proteins in same PDB: d1deda2, d1deda3, d1deda4, d1dedb2, d1dedb3, d1dedb4
    complexed with acr, ca; mutant
3. Domains for 1i75:
  1. Domain d1i75a1: 1i75 A:497-582 [61869]
    Other proteins in same PDB: d1i75a2, d1i75a3, d1i75a4, d1i75b2, d1i75b3, d1i75b4
  2. Domain d1i75b1: 1i75 B:497-582 [61873]
    Other proteins in same PDB: d1i75a2, d1i75a3, d1i75a4, d1i75b2, d1i75b3, d1i75b4
    complexed with ca, noj
4. Domains for 1pam:
  1. Domain d1pama1: 1pam A:497-582 [21846]
    Other proteins in same PDB: d1pama2, d1pama3, d1pama4, d1pamb2, d1pamb3, d1pamb4
  2. Domain d1pamb1: 1pam B:497-582 [21847]
    Other proteins in same PDB: d1pama2, d1pama3, d1pama4, d1pamb2, d1pamb3, d1pamb4
    complexed with ca
Bacillus stearothermophilus [TaxId:1422] [49217] (1 PDB entry)
- Domain for 1cyg:
  - Domain d1cyg_1: 1cyg 492-574 [21843]
    Other proteins in same PDB: d1cyg_2, d1cyg_3, d1cyg_4
    complexed with ca
Thermoanaerobacterium thermosulfurigenes, EM1 [TaxId:33950] [49220] (2 PDB entries)
1. Domain for 1a47:
  - Domain d1a47_1: 1a47 496-578 [21853]
    Other proteins in same PDB: d1a47_2, d1a47_3, d1a47_4
    complexed with ca, cyl, glc, gld, gte
2. Domain for 1ciu:
  - Domain d1ciu_1: 1ciu 496-578 [21852]
    Other proteins in same PDB: d1ciu_2, d1ciu_3, d1ciu_4
    complexed with ca

More info for Protein Cyclomaltodextrin glycanotransferase, domain D from b.1.18.2: E-set domains of sugar-utilizing enzymes

Timeline for Protein Cyclomaltodextrin glycanotransferase, domain D from b.1.18.2: E-set domains of sugar-utilizing enzymes:

Protein Cyclomaltodextrin glycanotransferase, domain D from b.1.18.2: E-set domains of sugar-utilizing enzymes first appeared (with stable ids) in SCOP 1.55, called Protein Cyclodextrin glycosyltransferase, domain E from b.1.1.5: E set domains
Protein Cyclomaltodextrin glycanotransferase, domain D from b.1.18.2: E-set domains of sugar-utilizing enzymes appears in SCOP 1.63
Protein Cyclomaltodextrin glycanotransferase, domain D from b.1.18.2: E-set domains of sugar-utilizing enzymes appears in SCOP 1.67
Protein Cyclomaltodextrin glycanotransferase, domain D from b.1.18.2: E-set domains of sugar-utilizing enzymes appears in the current release, SCOPe 2.08