SCOPe 2.08: Species: Rhodopseudomonas viridis [TaxId: 1079]

Lineage for Species: Rhodopseudomonas viridis [TaxId: 1079]

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.138: Multiheme cytochromes [48694] (1 superfamily)
variable number of helices and little beta structure; not a true fold
annotated by the SCOP(e) curators as 'not a true fold'
Superfamily a.138.1: Multiheme cytochromes [48695] (4 families)
duplication: contains multiple CxxCH motifs
Family a.138.1.2: Photosynthetic reaction centre (cytochrome subunit) [48707] (2 proteins)
consists of four heme-binding repeats
automatically mapped to Pfam PF02276
Protein Photosynthetic reaction centre (cytochrome subunit) [48708] (2 species)
Species Rhodopseudomonas viridis [TaxId:1079] [48709] (28 PDB entries)

PDB entries in Species: Rhodopseudomonas viridis [TaxId: 1079]:

Domain(s) for 1dxr:
- Domain d1dxrc_: 1dxr C: [19670]
  Other proteins in same PDB: d1dxrh1, d1dxrh2, d1dxrl_, d1dxrm_
  complexed with bcb, bpb, fe2, hec, lda, mq9, mst, ns5, so4; mutant
Domain(s) for 1prc:
- Domain d1prcc_: 1prc C: [19674]
  Other proteins in same PDB: d1prch1, d1prch2, d1prcl_, d1prcm_
  complexed with bcb, bpb, fe, hec, lda, mq7, ns1, so4, uq1
Domain(s) for 1r2c:
- Domain d1r2cc_: 1r2c C: [96859]
  Other proteins in same PDB: d1r2ch1, d1r2ch2, d1r2cl_, d1r2cm_
  complexed with bcb, bpb, fe2, hem, lda, mq7, ns5, so4, uq2
Domain(s) for 1vrn:
- Domain d1vrnc_: 1vrn C: [161867]
  Other proteins in same PDB: d1vrnh1, d1vrnh2, d1vrnl_, d1vrnm_
  automated match to d1dxrc_
  complexed with bcb, bpb, fe2, hec, lda, mq9, ns5, so4, uq7
Domain(s) for 2i5n:
- Domain d2i5nc_: 2i5n C: [137063]
  Other proteins in same PDB: d2i5nh1, d2i5nh2, d2i5nl_, d2i5nm_
  automated match to d1prcc_
  complexed with bcb, bpb, fe2, hec, hto, lda, mq9, ns5, so4, unl, uq1
Domain(s) for 2jbl:
- Domain d2jblc_: 2jbl C: [165986]
  Other proteins in same PDB: d2jblh1, d2jblh2, d2jbll_, d2jblm_
  complexed with bcb, bpb, fe, hec, lda, mq7, ns5, sma, so4
Domain(s) for 2prc:
- Domain d2prcc_: 2prc C: [19675]
  Other proteins in same PDB: d2prch1, d2prch2, d2prch3, d2prcl_, d2prcm_
  complexed with bcb, bpb, fe2, hem, lda, mq7, ns5, so4, uq2
Domain(s) for 2wjm:
- Domain d2wjmc_: 2wjm C: [169380]
  Other proteins in same PDB: d2wjmh1, d2wjmh2, d2wjml_, d2wjmm_
  automated match to d1prcc_
  complexed with bcb, bpb, dga, fe2, hec, mpg, mq7, ns5, po4
Domain(s) for 2wjn:
- Domain d2wjnc_: 2wjn C: [169383]
  Other proteins in same PDB: d2wjnh1, d2wjnh2, d2wjnl_, d2wjnm_
  automated match to d1prcc_
  complexed with bcb, bpb, fe2, hec, mpg, mq7, ns5
Domain(s) for 2x5u:
- Domain d2x5uc_: 2x5u C: [244428]
  Other proteins in same PDB: d2x5uh1, d2x5uh2, d2x5ul_, d2x5um_
  automated match to d3t6ec_
  complexed with bcb, bpb, fe2, hec, mq7
Domain(s) for 2x5v:
- Domain d2x5vc_: 2x5v C: [244433]
  Other proteins in same PDB: d2x5vh1, d2x5vh2, d2x5vl_, d2x5vm_
  automated match to d3t6ec_
  complexed with bcb, bpb, fe2, hec, mq7
Domain(s) for 3d38:
- Domain d3d38c1: 3d38 C:1-332 [157273]
  Other proteins in same PDB: d3d38h1, d3d38h2, d3d38l1, d3d38m1
  automatically matched to d1prcc_
  complexed with bcb, bpb, fe2, hec, hto, lda, mq9, ns5, so4, uq1
Domain(s) for 3g7f:
- Domain d3g7fc_: 3g7f C: [176407]
  Other proteins in same PDB: d3g7fh1, d3g7fh2, d3g7fl_, d3g7fm_
  automated match to d1prcc_
  complexed with bcb, bpb, fe2, hec, hto, lda, mq9, ns5, so4, uq1; mutant
Domain(s) for 3prc:
- Domain d3prcc_: 3prc C: [19672]
  Other proteins in same PDB: d3prch1, d3prch2, d3prch3, d3prcl_, d3prcm_
  complexed with bcb, bpb, fe2, hem, lda, mq7, ns5, so4
Domain(s) for 3t6e:
- Domain d3t6ec_: 3t6e C: [200765]
  Other proteins in same PDB: d3t6eh1, d3t6eh2, d3t6el_, d3t6em_
  automated match to d2jblc_
  complexed with bcb, bpb, dga, fe2, gol, hec, hto, lda, mq9, ns5, so4, uq9
Domain(s) for 4prc:
- Domain d4prcc_: 4prc C: [308002]
  Other proteins in same PDB: d4prch3, d4prch4, d4prch5, d4prcl_, d4prcm_
  automated match to d6prcc_
  complexed with bcb, bpb, fe2, hem, lda, mq7, ns5, sma, so4
Domain(s) for 5nj4:
- Domain d5nj4c_: 5nj4 C: [337889]
  Other proteins in same PDB: d5nj4h1, d5nj4h2, d5nj4l_, d5nj4m_
  automated match to d6prcc_
  complexed with bcb, bpb, dga, fe2, hec, hto, lda, mq7, ns5, so4
Domain(s) for 5o4c:
- Domain d5o4cc_: 5o4c C: [337964]
  Other proteins in same PDB: d5o4ch1, d5o4ch2, d5o4cl_, d5o4cm_
  automated match to d6prcc_
  complexed with bcb, bpb, dga, fe2, hec, hto, lda, mq7, ns5, so4
Domain(s) for 5prc:
- Domain d5prcc_: 5prc C: [19673]
  Other proteins in same PDB: d5prch1, d5prch2, d5prch3, d5prcl_, d5prcm_
  complexed with atz, bcb, bpb, fe2, hem, lda, mq7, ns5, so4
Domain(s) for 6prc:
- Domain d6prcc_: 6prc C: [19671]
  Other proteins in same PDB: d6prch1, d6prch2, d6prch3, d6prcl_, d6prcm_
  complexed with bcb, bpb, ceb, fe2, hem, lda, mq7, ns5, so4
Domain(s) for 6zhw:
- Domain d6zhwc_: 6zhw C: [396721]
  Other proteins in same PDB: d6zhwh1, d6zhwh2, d6zhwl_, d6zhwm_
  automated match to d6prcc_
  complexed with bcb, bpb, dga, fe, hec, hto, lda, mq7, ns5, so4
Domain(s) for 6zi4:
- Domain d6zi4c_: 6zi4 C: [396665]
  Other proteins in same PDB: d6zi4h1, d6zi4h2, d6zi4l_, d6zi4m_
  automated match to d6prcc_
  complexed with bcb, bpb, dga, fe, hec, hto, lda, mq7, ns5, so4
Domain(s) for 6zi5:
- Domain d6zi5c_: 6zi5 C: [396638]
  Other proteins in same PDB: d6zi5h1, d6zi5h2, d6zi5l_, d6zi5m_
  automated match to d6prcc_
  complexed with bcb, bpb, dga, fe, hec, hto, lda, mq7, ns5, so4
Domain(s) for 6zi6:
- Domain d6zi6c_: 6zi6 C: [396701]
  Other proteins in same PDB: d6zi6h1, d6zi6h2, d6zi6l_, d6zi6m_
  automated match to d6prcc_
  complexed with bcb, bpb, dga, fe, hec, hto, lda, mq7, ns5, so4
Domain(s) for 6zi9:
- Domain d6zi9c_: 6zi9 C: [396699]
  Other proteins in same PDB: d6zi9h1, d6zi9h2, d6zi9l_, d6zi9m_
  automated match to d6prcc_
  complexed with bcb, bpb, dga, fe, hec, hto, lda, mq7, ns5, so4
Domain(s) for 6zia:
- Domain d6ziac_: 6zia C: [396783]
  Other proteins in same PDB: d6ziah1, d6ziah2, d6zial_, d6ziam_
  automated match to d6prcc_
  complexed with bcb, bpb, dga, fe, hec, hto, lda, mq7, ns5, so4
Domain(s) for 6zid:
- Domain d6zidc_: 6zid C: [396740]
  Other proteins in same PDB: d6zidh1, d6zidh2, d6zidl_, d6zidm_
  automated match to d6prcc_
  complexed with bcb, bpb, dga, fe, hec, hto, lda, mq7, ns5, so4
Domain(s) for 7prc:
- Domain d7prcc_: 7prc C: [19677]
  Other proteins in same PDB: d7prch1, d7prch2, d7prch3, d7prcl_, d7prcm_
  complexed with bcb, bpb, cet, fe2, hem, lda, mq7, ns5, so4

More info for Species Rhodopseudomonas viridis [TaxId:1079] from a.138.1.2 Photosynthetic reaction centre (cytochrome subunit)

Timeline for Species Rhodopseudomonas viridis [TaxId:1079] from a.138.1.2 Photosynthetic reaction centre (cytochrome subunit):

Species Rhodopseudomonas viridis [TaxId:1079] from a.138.1.2 Photosynthetic reaction centre (cytochrome subunit) first appeared (with stable ids) in SCOP 1.55
Species Rhodopseudomonas viridis [TaxId:1079] from a.138.1.2 Photosynthetic reaction centre (cytochrome subunit) appears in SCOPe 2.07