Lineage for Protein: Retinoid-X receptor alpha (RXR-alpha)

  1. Root: SCOPe 2.01
  2. 901761Class a: All alpha proteins [46456] (284 folds)
  3. 923257Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 923258Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 923259Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)
  6. 923849Protein Retinoid-X receptor alpha (RXR-alpha) [48510] (2 species)

Species:

  1. 923850Human (Homo sapiens) [TaxId:9606] [48511] (32 PDB entries)
    Uniprot P19793 227-458
    1. Domains for 1fby:
      1. 923875Domain d1fbya_: 1fby A: [19275]
        complex with 9-cis retinoic acid
        complexed with rea
      2. 923876Domain d1fbyb_: 1fby B: [19276]
        complex with 9-cis retinoic acid
        complexed with rea
    2. Domains for 1fm6:
      1. 923877Domain d1fm6a_: 1fm6 A: [19277]
        Other proteins in same PDB: d1fm6d_, d1fm6x_
        complexed with brl, rea
      2. 923878Domain d1fm6u_: 1fm6 U: [19278]
        Other proteins in same PDB: d1fm6d_, d1fm6x_
        complexed with brl, rea
    3. Domain for 1fm9:
    4. Domains for 1g1u:
      1. 923885Domain d1g1ua_: 1g1u A: [60204]
      2. 923886Domain d1g1ub_: 1g1u B: [60205]
      3. 923887Domain d1g1uc_: 1g1u C: [60206]
      4. 923888Domain d1g1ud_: 1g1u D: [60207]
    5. Domains for 1g5y:
      1. 923867Domain d1g5ya_: 1g5y A: [60294]
        complexed with rea
      2. 923868Domain d1g5yb_: 1g5y B: [60295]
        complexed with rea
      3. 923869Domain d1g5yc_: 1g5y C: [60296]
        complexed with rea
      4. 923870Domain d1g5yd_: 1g5y D: [60297]
        complexed with rea
    6. Domain for 1k74:
      • 923881Domain d1k74a_: 1k74 A: [68251]
        Other proteins in same PDB: d1k74d_
        heterodimer with PPAR-gamma complexed with co-activator peptides
        complexed with 544, rea
    7. Domain for 1lbd:
    8. Domain for 1mv9:
      • 923857Domain d1mv9a_: 1mv9 A: [79498]
        complexed with co-activator peptide
        complexed with hxa
    9. Domain for 1mvc:
      • 923856Domain d1mvca_: 1mvc A: [79499]
        complexed with co-activator peptide
        complexed with bm6
    10. Domains for 1mzn:
      1. 923852Domain d1mzna_: 1mzn A: [79704]
        complexed with co-activator peptide
        complexed with bm6
      2. 923853Domain d1mznc_: 1mzn C: [79705]
        complexed with co-activator peptide
        complexed with bm6
      3. 923854Domain d1mzne_: 1mzn E: [79706]
        complexed with co-activator peptide
        complexed with bm6
      4. 923855Domain d1mzng_: 1mzn G: [79707]
        complexed with co-activator peptide
        complexed with bm6
    11. Domain for 1rdt:
      • 923874Domain d1rdta_: 1rdt A: [111787]
        Other proteins in same PDB: d1rdtd_
        complexed with co-activator peptide
        complexed with 570, l79
    12. Domains for 1xdk:
      1. 923905Domain d1xdka_: 1xdk A: [115164]
        Other proteins in same PDB: d1xdkb_, d1xdkf_
        complexed with co-activator peptide
        complexed with rea
      2. 923906Domain d1xdke_: 1xdk E: [115166]
        Other proteins in same PDB: d1xdkb_, d1xdkf_
        complexed with co-activator peptide
        complexed with rea
    13. Domains for 1xv9:
      1. 923889Domain d1xv9a_: 1xv9 A: [116080]
        Other proteins in same PDB: d1xv9b_, d1xv9d_
        complexed with ci2, f15
      2. 923890Domain d1xv9c_: 1xv9 C: [116082]
        Other proteins in same PDB: d1xv9b_, d1xv9d_
        complexed with ci2, f15
    14. Domains for 1xvp:
      1. 923882Domain d1xvpa_: 1xvp A: [116090]
        Other proteins in same PDB: d1xvpb_, d1xvpd_
        complexed with cid, f15
      2. 923883Domain d1xvpc_: 1xvp C: [116092]
        Other proteins in same PDB: d1xvpb_, d1xvpd_
        complexed with cid, f15
    15. Domains for 2acl:
      1. 923892Domain d2acla_: 2acl A: [126559]
        Other proteins in same PDB: d2aclb1, d2acld_, d2aclf_, d2aclh_
        automated match to d1lbd__
        complexed with l05, rea
      2. 923893Domain d2aclc_: 2acl C: [126560]
        Other proteins in same PDB: d2aclb1, d2acld_, d2aclf_, d2aclh_
        automated match to d1lbd__
        complexed with l05, rea
      3. 923894Domain d2acle_: 2acl E: [126561]
        Other proteins in same PDB: d2aclb1, d2acld_, d2aclf_, d2aclh_
        automated match to d1lbd__
        complexed with l05, rea
      4. 923895Domain d2aclg_: 2acl G: [126562]
        Other proteins in same PDB: d2aclb1, d2acld_, d2aclf_, d2aclh_
        automated match to d1lbd__
        complexed with l05, rea
    16. Domain for 2p1t:
    17. Domain for 2p1u:
    18. Domain for 2p1v:
    19. Domains for 2zy0:
      1. 923896Domain d2zy0a_: 2zy0 A: [171603]
        automated match to d1lbda_
        complexed with 21p
      2. 923897Domain d2zy0c_: 2zy0 C: [171604]
        automated match to d1lbda_
        complexed with 21p
    20. Domain for 3a9e:
    21. Domain for 3e94:
    22. Domains for 3fal:
      1. 923879Domain d3fala_: 3fal A: [175615]
        automated match to d1lbda_
        protein/DNA complex; complexed with lo2, rea
      2. 923880Domain d3falc_: 3fal C: [175616]
        automated match to d1lbda_
        protein/DNA complex; complexed with lo2, rea
    23. Domains for 3fc6:
      1. 923862Domain d3fc6a_: 3fc6 A: [175671]
        automated match to d1lbda_
        complexed with lx2, rea
      2. 923863Domain d3fc6c_: 3fc6 C: [175672]
        automated match to d1lbda_
        complexed with lx2, rea
    24. Domain for 3fug:
    25. Domain for 3h0a:
    26. Domain for 3kwy:
    27. Domains for 3nsp:
      1. 923901Domain d3nspa_: 3nsp A: [182522]
        automated match to d1lbda_
      2. 923902Domain d3nspb_: 3nsp B: [182523]
        automated match to d1lbda_
    28. Domains for 3nsq:
      1. 923899Domain d3nsqa_: 3nsq A: [182524]
        automated match to d1lbda_
        complexed with chz
      2. 923900Domain d3nsqb_: 3nsq B: [182525]
        automated match to d1lbda_
        complexed with chz
    29. Domain for 3oap:
    30. Domains for 3ozj:
      1. 923872Domain d3ozja_: 3ozj A: [183419]
        automated match to d1lbda_
        complexed with bgv
      2. 923873Domain d3ozjc_: 3ozj C: [183420]
        automated match to d1lbda_
        complexed with bgv
    31. Domain for 3pcu:
    32. Domains for 3r29:
      1. 923903Domain d3r29a_: 3r29 A: [184779]
        automated match to d1lbda_
      2. 923904Domain d3r29b_: 3r29 B: [184780]
        automated match to d1lbda_
  2. 923907Mouse (Mus musculus) [TaxId:10090] [48512] (2 PDB entries)
    Uniprot P28700 232-463
    1. Domain for 1dkf:
    2. Domains for 1xls:
      1. 923909Domain d1xlsa_: 1xls A: [115447]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
        complexed with rea, tcd
      2. 923910Domain d1xlsb_: 1xls B: [115448]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
        complexed with rea, tcd
      3. 923911Domain d1xlsc_: 1xls C: [115449]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
        complexed with rea, tcd
      4. 923912Domain d1xlsd_: 1xls D: [115450]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
        complexed with rea, tcd

More info for Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain

Timeline for Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain: