SCOP 1.71: Protein: Retinoid-X receptor alpha (RXR-alpha)

Lineage for Protein: Retinoid-X receptor alpha (RXR-alpha)

Root: SCOP 1.71
Class a: All alpha proteins [46456] (226 folds)
Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
multihelical; 3 layers or orthogonally packed helices
Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (1 family)
Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (32 proteins)
Protein Retinoid-X receptor alpha (RXR-alpha) [48510] (2 species)

Species:

Human (Homo sapiens) [TaxId:9606] [48511] (14 PDB entries)
1. Domains for 1fby:
  1. Domain d1fbya_: 1fby A: [19275]
  2. Domain d1fbyb_: 1fby B: [19276]
    complex with 9-cis retinoic acid
    complexed with rea
2. Domains for 1fm6:
  1. Domain d1fm6a_: 1fm6 A: [19277]
    Other proteins in same PDB: d1fm6d_, d1fm6x_
  2. Domain d1fm6u_: 1fm6 U: [19278]
    Other proteins in same PDB: d1fm6d_, d1fm6x_
    complexed with brl, rea
3. Domain for 1fm9:
  - Domain d1fm9a_: 1fm9 A: [19274]
    Other proteins in same PDB: d1fm9d_
    complexed with 570, rea
4. Domains for 1g1u:
  1. Domain d1g1ua_: 1g1u A: [60204]
  2. Domain d1g1ub_: 1g1u B: [60205]
  3. Domain d1g1uc_: 1g1u C: [60206]
  4. Domain d1g1ud_: 1g1u D: [60207]
5. Domains for 1g5y:
  1. Domain d1g5ya_: 1g5y A: [60294]
  2. Domain d1g5yb_: 1g5y B: [60295]
  3. Domain d1g5yc_: 1g5y C: [60296]
  4. Domain d1g5yd_: 1g5y D: [60297]
    complexed with rea
6. Domain for 1k74:
  - Domain d1k74a_: 1k74 A: [68251]
    Other proteins in same PDB: d1k74d_
    heterodimer with PPAR-gamma complexed with co-activator peptides
    complexed with 544, rea
7. Domain for 1lbd:
  - Domain d1lbd__: 1lbd - [19279]
8. Domain for 1mv9:
  - Domain d1mv9a_: 1mv9 A: [79498]
    complexed with co-activator peptide
    complexed with hxa
9. Domain for 1mvc:
  - Domain d1mvca_: 1mvc A: [79499]
    complexed with co-activator peptide
    complexed with bm6
10. Domains for 1mzn:
  1. Domain d1mzna_: 1mzn A: [79704]
  2. Domain d1mznc_: 1mzn C: [79705]
  3. Domain d1mzne_: 1mzn E: [79706]
  4. Domain d1mzng_: 1mzn G: [79707]
    complexed with co-activator peptide
    complexed with bm6
11. Domain for 1rdt:
  - Domain d1rdta_: 1rdt A: [111787]
    Other proteins in same PDB: d1rdtd_
    complexed with co-activator peptide
    complexed with 570, l79
12. Domains for 1xdk:
  1. Domain d1xdka_: 1xdk A: [115164]
    Other proteins in same PDB: d1xdkb_, d1xdkf_
  2. Domain d1xdke_: 1xdk E: [115166]
    Other proteins in same PDB: d1xdkb_, d1xdkf_
    complexed with co-activator peptide
    complexed with rea
13. Domains for 1xv9:
  1. Domain d1xv9a_: 1xv9 A: [116080]
    Other proteins in same PDB: d1xv9b_, d1xv9d_
  2. Domain d1xv9c_: 1xv9 C: [116082]
    Other proteins in same PDB: d1xv9b_, d1xv9d_
    complexed with ci2, f15
14. Domains for 1xvp:
  1. Domain d1xvpa_: 1xvp A: [116090]
    Other proteins in same PDB: d1xvpb_, d1xvpd_
  2. Domain d1xvpc_: 1xvp C: [116092]
    Other proteins in same PDB: d1xvpb_, d1xvpd_
    complexed with cid, f15
Mouse (Mus musculus) [TaxId:10090] [48512] (2 PDB entries)
1. Domain for 1dkf:
  - Domain d1dkfa_: 1dkf A: [19280]
    Other proteins in same PDB: d1dkfb_
    complexed with bms, oli; mutant
2. Domains for 1xls:
  1. Domain d1xlsa_: 1xls A: [115447]
    Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
  2. Domain d1xlsb_: 1xls B: [115448]
    Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
  3. Domain d1xlsc_: 1xls C: [115449]
    Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
  4. Domain d1xlsd_: 1xls D: [115450]
    Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
    complexed with rea, tcd; mutant

More info for Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain

Timeline for Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain:

Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain first appeared (with stable ids) in SCOP 1.55, called Protein Retinoid-X receptor (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain
Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain appears in SCOP 1.69
Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain appears in SCOP 1.73
Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain appears in the current release, SCOPe 2.08