Lineage for Protein: Retinoid-X receptor alpha (RXR-alpha)

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2008476Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
    multihelical; 3 layers or orthogonally packed helices
  4. 2008477Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families) (S)
  5. 2008478Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 protein domains)
  6. 2009236Protein Retinoid-X receptor alpha (RXR-alpha) [48510] (2 species)

Species:

  1. 2009237Human (Homo sapiens) [TaxId:9606] [48511] (35 PDB entries)
    Uniprot P19793 227-458
    1. Domains for 1fby:
      1. 2009266Domain d1fbya_: 1fby A: [19275]
        complex with 9-cis retinoic acid
        complexed with rea
      2. 2009267Domain d1fbyb_: 1fby B: [19276]
        complex with 9-cis retinoic acid
        complexed with rea
    2. Domains for 1fm6:
      1. 2009263Domain d1fm6a_: 1fm6 A: [19277]
        Other proteins in same PDB: d1fm6d_, d1fm6x_
        complexed with 9cr, brl
      2. 2009264Domain d1fm6u_: 1fm6 U: [19278]
        Other proteins in same PDB: d1fm6d_, d1fm6x_
        complexed with 9cr, brl
    3. Domain for 1fm9:
    4. Domains for 1g1u:
      1. 2009273Domain d1g1ua_: 1g1u A: [60204]
      2. 2009274Domain d1g1ub_: 1g1u B: [60205]
      3. 2009275Domain d1g1uc_: 1g1u C: [60206]
      4. 2009276Domain d1g1ud_: 1g1u D: [60207]
    5. Domains for 1g5y:
      1. 2009254Domain d1g5ya_: 1g5y A: [60294]
        complexed with rea
      2. 2009255Domain d1g5yb_: 1g5y B: [60295]
        complexed with rea
      3. 2009256Domain d1g5yc_: 1g5y C: [60296]
        complexed with rea
      4. 2009257Domain d1g5yd_: 1g5y D: [60297]
        complexed with rea
    6. Domain for 1k74:
      • 2009270Domain d1k74a_: 1k74 A: [68251]
        Other proteins in same PDB: d1k74d_
        heterodimer with PPAR-gamma complexed with co-activator peptides
        complexed with 544, 9cr
    7. Domain for 1lbd:
    8. Domain for 1mv9:
      • 2009244Domain d1mv9a_: 1mv9 A: [79498]
        complexed with co-activator peptide
        complexed with hxa
    9. Domain for 1mvc:
      • 2009243Domain d1mvca_: 1mvc A: [79499]
        complexed with co-activator peptide
        complexed with bm6
    10. Domains for 1mzn:
      1. 2009239Domain d1mzna_: 1mzn A: [79704]
        complexed with co-activator peptide
        complexed with bm6
      2. 2009240Domain d1mznc_: 1mzn C: [79705]
        complexed with co-activator peptide
        complexed with bm6
      3. 2009241Domain d1mzne_: 1mzn E: [79706]
        complexed with co-activator peptide
        complexed with bm6
      4. 2009242Domain d1mzng_: 1mzn G: [79707]
        complexed with co-activator peptide
        complexed with bm6
    11. Domain for 1rdt:
    12. Domains for 1xls:
      1. 2009293Domain d1xlsa_: 1xls A: [115447]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
        complexed with rea, tcd
      2. 2009294Domain d1xlsb_: 1xls B: [115448]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
        complexed with rea, tcd
      3. 2009295Domain d1xlsc_: 1xls C: [115449]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
        complexed with rea, tcd
      4. 2009296Domain d1xlsd_: 1xls D: [115450]
        Other proteins in same PDB: d1xlse_, d1xlsf_, d1xlsg_, d1xlsh_
        complexed with rea, tcd
    13. Domains for 1xv9:
      1. 2009277Domain d1xv9a_: 1xv9 A: [116080]
        Other proteins in same PDB: d1xv9b_, d1xv9d_
        complexed with ci2, f15
      2. 2009278Domain d1xv9c_: 1xv9 C: [116082]
        Other proteins in same PDB: d1xv9b_, d1xv9d_
        complexed with ci2, f15
    14. Domains for 1xvp:
      1. 2009271Domain d1xvpa_: 1xvp A: [116090]
        Other proteins in same PDB: d1xvpb_, d1xvpd_
        complexed with cid, f15
      2. 2009272Domain d1xvpc_: 1xvp C: [116092]
        Other proteins in same PDB: d1xvpb_, d1xvpd_
        complexed with cid, f15
    15. Domains for 2acl:
      1. 2009280Domain d2acla_: 2acl A: [126559]
        Other proteins in same PDB: d2aclb1, d2aclb2, d2acld2, d2acld3, d2aclf2, d2aclf3, d2aclh2, d2aclh3
        automated match to d1lbd__
        complexed with l05, rea
      2. 2009281Domain d2aclc_: 2acl C: [126560]
        Other proteins in same PDB: d2aclb1, d2aclb2, d2acld2, d2acld3, d2aclf2, d2aclf3, d2aclh2, d2aclh3
        automated match to d1lbd__
        complexed with l05, rea
      3. 2009282Domain d2acle_: 2acl E: [126561]
        Other proteins in same PDB: d2aclb1, d2aclb2, d2acld2, d2acld3, d2aclf2, d2aclf3, d2aclh2, d2aclh3
        automated match to d1lbd__
        complexed with l05, rea
      4. 2009283Domain d2aclg_: 2acl G: [126562]
        Other proteins in same PDB: d2aclb1, d2aclb2, d2acld2, d2acld3, d2aclf2, d2aclf3, d2aclh2, d2aclh3
        automated match to d1lbd__
        complexed with l05, rea
    16. Domain for 2p1t:
    17. Domain for 2p1u:
    18. Domain for 2p1v:
    19. Domains for 2zy0:
      1. 2009284Domain d2zy0a_: 2zy0 A: [171603]
        automated match to d1lbda_
        complexed with 21p
      2. 2009285Domain d2zy0c_: 2zy0 C: [171604]
        automated match to d1lbda_
        complexed with 21p
    20. Domain for 3e94:
    21. Domains for 3fal:
      1. 2009268Domain d3fala_: 3fal A: [175615]
        Other proteins in same PDB: d3falb_, d3fald_
        automated match to d1lbda_
        protein/DNA complex; complexed with lo2, rea
      2. 2009269Domain d3falc_: 3fal C: [175616]
        Other proteins in same PDB: d3falb_, d3fald_
        automated match to d1lbda_
        protein/DNA complex; complexed with lo2, rea
    22. Domains for 3fc6:
      1. 2009249Domain d3fc6a_: 3fc6 A: [175671]
        Other proteins in same PDB: d3fc6b_, d3fc6d_
        automated match to d1lbda_
        complexed with lx2, rea
      2. 2009250Domain d3fc6c_: 3fc6 C: [175672]
        Other proteins in same PDB: d3fc6b_, d3fc6d_
        automated match to d1lbda_
        complexed with lx2, rea
    23. Domain for 3fug:
    24. Domain for 3h0a:
    25. Domain for 3kwy:
    26. Domains for 3nsp:
      1. 2009291Domain d3nspa_: 3nsp A: [182522]
        automated match to d1lbda_
      2. 2009292Domain d3nspb_: 3nsp B: [182523]
        automated match to d1lbda_
    27. Domains for 3nsq:
      1. 2009289Domain d3nsqa_: 3nsq A: [182524]
        automated match to d1lbda_
        complexed with chz
      2. 2009290Domain d3nsqb_: 3nsq B: [182525]
        automated match to d1lbda_
        complexed with chz
    28. Domain for 3oap:
    29. Domains for 3ozj:
      1. 2009259Domain d3ozja_: 3ozj A: [183419]
        automated match to d1lbda_
        complexed with bgv
      2. 2009260Domain d3ozjc_: 3ozj C: [183420]
        automated match to d1lbda_
        complexed with bgv
    30. Domain for 3pcu:
    31. Domains for 3r29:
      1. 2009297Domain d3r29a_: 3r29 A: [184779]
        automated match to d1lbda_
      2. 2009298Domain d3r29b_: 3r29 B: [184780]
        automated match to d1lbda_
    32. Domain for 3r5m:
    33. Domain for 3uvv:
    34. Domains for 4n5g:
      1. 2009261Domain d4n5gb_: 4n5g B: [257126]
        automated match to d1lbda_
        complexed with k09
      2. 2009262Domain d4n5gc_: 4n5g C: [263105]
        automated match to d1lbda_
        complexed with k09
    35. Domains for 5tbp:
      1. 2294281Domain d5tbpb_: 5tbp B: [337582]
        automated match to d1xvpc_
        complexed with 7a4, act, dms, gol
      2. 2294289Domain d5tbpc_: 5tbp C: [337590]
        automated match to d1xvpc_
        complexed with 7a4, act, dms, gol
  2. 2009299Mouse (Mus musculus) [TaxId:10090] [48512] (3 PDB entries)
    Uniprot P28700 232-463
    1. Domain for 1dkf:
    2. Domains for 1xdk:
      1. 2009302Domain d1xdka_: 1xdk A: [115164]
        Other proteins in same PDB: d1xdkb_, d1xdkf_
        complexed with co-activator peptide
        complexed with rea
      2. 2009303Domain d1xdke_: 1xdk E: [115166]
        Other proteins in same PDB: d1xdkb_, d1xdkf_
        complexed with co-activator peptide
        complexed with rea
    3. Domain for 3a9e:

More info for Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain

Timeline for Protein Retinoid-X receptor alpha (RXR-alpha) from a.123.1.1: Nuclear receptor ligand-binding domain: