SCOPe 2.07: Protein: Ribosomal protein L7/12, oligomerisation (N-terminal) domain

Lineage for Protein: Ribosomal protein L7/12, oligomerisation (N-terminal) domain

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.108: Ribosomal protein L7/12, oligomerisation (N-terminal) domain [48299] (1 superfamily)
multihelical; intertwined tetramer
Superfamily a.108.1: Ribosomal protein L7/12, oligomerisation (N-terminal) domain [48300] (1 family)
Family a.108.1.1: Ribosomal protein L7/12, oligomerisation (N-terminal) domain [48301] (1 protein)
Protein Ribosomal protein L7/12, oligomerisation (N-terminal) domain [48302] (2 species)

Species:

Escherichia coli [TaxId:562] [101379] (5 PDB entries)

Domains for 1rqt:
1. Domain d1rqta_: 1rqt A: [97771]
  dimeric solution structure, similar to the SinR repressor dimerisation domain-like fold
2. Domain d1rqtb_: 1rqt B: [97772]
  dimeric solution structure, similar to the SinR repressor dimerisation domain-like fold
Domains for 1rqu:
1. Domain d1rqua1: 1rqu A:1-51 [97773]
  Other proteins in same PDB: d1rqua2, d1rqub2
  includes hinge region 33-51 that is flexible in both chains
2. Domain d1rqub1: 1rqu B:1-51 [97775]
  Other proteins in same PDB: d1rqua2, d1rqub2
  includes hinge region 33-51 that is flexible in both chains
Domains for 1rqv:
1. Domain d1rqva1: 1rqv A:1-51 [97777]
  Other proteins in same PDB: d1rqva2, d1rqvb2
  includes hinge region 33-51 that adopts a helical conformation in chain A but is flexible in chain B
2. Domain d1rqvb1: 1rqv B:1-51 [97779]
  Other proteins in same PDB: d1rqva2, d1rqvb2
  includes hinge region 33-51 that adopts a helical conformation in chain A but is flexible in chain B

Domains for 2gya:

Domain d2gya31: 2gya 3:2-48 [135834]
Other proteins in same PDB: d2gya11, d2gya32, d2gya52, d2gyab1, d2gyac1, d2gyad1, d2gyaf1, d2gyaf2, d2gyag1, d2gyag2, d2gyah1, d2gyai1, d2gyaj1, d2gyak1, d2gyam1, d2gyan1, d2gyao1, d2gyaq1, d2gyas1, d2gyat1, d2gyau1, d2gyaw1, d2gyax1

2338103

Domain d2gya51: 2gya 5:2-48 [135836]
Other proteins in same PDB: d2gya11, d2gya32, d2gya52, d2gyab1, d2gyac1, d2gyad1, d2gyaf1, d2gyaf2, d2gyag1, d2gyag2, d2gyah1, d2gyai1, d2gyaj1, d2gyak1, d2gyam1, d2gyan1, d2gyao1, d2gyaq1, d2gyas1, d2gyat1, d2gyau1, d2gyaw1, d2gyax1

Domains for 2gyc:

Domain d2gyc31: 2gyc 3:2-48 [135846]
Other proteins in same PDB: d2gyc11, d2gyc32, d2gyc52, d2gycb1, d2gycc1, d2gycd1, d2gycf1, d2gycf2, d2gycg1, d2gycg2, d2gych1, d2gyci1, d2gycj1, d2gyck1, d2gycm1, d2gycn1, d2gyco1, d2gycq1, d2gycs1, d2gyct1, d2gycu1, d2gycw1, d2gycx1
protein/RNA complex
protein/RNA complex

Domain d2gyc51: 2gyc 5:2-48 [135848]
Other proteins in same PDB: d2gyc11, d2gyc32, d2gyc52, d2gycb1, d2gycc1, d2gycd1, d2gycf1, d2gycf2, d2gycg1, d2gycg2, d2gych1, d2gyci1, d2gycj1, d2gyck1, d2gycm1, d2gycn1, d2gyco1, d2gycq1, d2gycs1, d2gyct1, d2gycu1, d2gycw1, d2gycx1
protein/RNA complex
protein/RNA complex

Thermotoga maritima [TaxId:2336] [48303] (6 PDB entries)

Domains for 1dd3:
1. Domain d1dd3a1: 1dd3 A:1-57 [19031]
  Other proteins in same PDB: d1dd3a2, d1dd3b2
2. Domain d1dd3b1: 1dd3 B:1-57 [19032]
  Other proteins in same PDB: d1dd3a2, d1dd3b2
3. Domain d1dd3c_: 1dd3 C: [19033]
  Other proteins in same PDB: d1dd3a2, d1dd3b2
4. Domain d1dd3d_: 1dd3 D: [19034]
  Other proteins in same PDB: d1dd3a2, d1dd3b2
Domains for 1dd4:
1. Domain d1dd4a1: 1dd4 A:1-57 [19035]
  Other proteins in same PDB: d1dd4a2, d1dd4b2
  complexed with tbr
2. Domain d1dd4b1: 1dd4 B:1-57 [19036]
  Other proteins in same PDB: d1dd4a2, d1dd4b2
  complexed with tbr
3. Domain d1dd4c_: 1dd4 C: [19037]
  Other proteins in same PDB: d1dd4a2, d1dd4b2
  complexed with tbr
4. Domain d1dd4d_: 1dd4 D: [19038]
  Other proteins in same PDB: d1dd4a2, d1dd4b2
  complexed with tbr

Domains for 1yl3:

Domain d1yl3i1: 1yl3 I:1-57 [123580]
Other proteins in same PDB: d1yl301, d1yl311, d1yl321, d1yl331, d1yl351, d1yl371, d1yl381, d1yl391, d1yl3c1, d1yl3d1, d1yl3d2, d1yl3f1, d1yl3h1, d1yl3h2, d1yl3i2, d1yl3j2, d1yl3k1, d1yl3k2, d1yl3l1, d1yl3l2, d1yl3m1, d1yl3n1, d1yl3r1, d1yl3s1, d1yl3t1, d1yl3u1, d1yl3v1, d1yl3w1, d1yl3x1

Domain d1yl3j1: 1yl3 J:1-57 [123582]
Other proteins in same PDB: d1yl301, d1yl311, d1yl321, d1yl331, d1yl351, d1yl371, d1yl381, d1yl391, d1yl3c1, d1yl3d1, d1yl3d2, d1yl3f1, d1yl3h1, d1yl3h2, d1yl3i2, d1yl3j2, d1yl3k1, d1yl3k2, d1yl3l1, d1yl3l2, d1yl3m1, d1yl3n1, d1yl3r1, d1yl3s1, d1yl3t1, d1yl3u1, d1yl3v1, d1yl3w1, d1yl3x1

Domains for 1zav:
1. Domain d1zavu1: 1zav U:1-30 [145963]
  Other proteins in same PDB: d1zava1, d1zava2
  protein/RNA complex
2. Domain d1zavv1: 1zav V:1-30 [145964]
  Other proteins in same PDB: d1zava1, d1zava2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
3. Domain d1zavw1: 1zav W:1-30 [145965]
  Other proteins in same PDB: d1zava1, d1zava2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
4. Domain d1zavx1: 1zav X:1-29 [145966]
  Other proteins in same PDB: d1zava1, d1zava2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
5. Domain d1zavy1: 1zav Y:1-29 [145967]
  Other proteins in same PDB: d1zava1, d1zava2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
6. Domain d1zavz1: 1zav Z:2-28 [145968]
  Other proteins in same PDB: d1zava1, d1zava2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
Domains for 1zaw:
1. Domain d1zawu1: 1zaw U:1-30 [145970]
  Other proteins in same PDB: d1zawa1, d1zawa2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
2. Domain d1zawv1: 1zaw V:1-30 [145971]
  Other proteins in same PDB: d1zawa1, d1zawa2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
3. Domain d1zaww1: 1zaw W:1-30 [145972]
  Other proteins in same PDB: d1zawa1, d1zawa2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
4. Domain d1zawx1: 1zaw X:1-29 [145973]
  Other proteins in same PDB: d1zawa1, d1zawa2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
5. Domain d1zawy1: 1zaw Y:1-29 [145974]
  Other proteins in same PDB: d1zawa1, d1zawa2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
6. Domain d1zawz1: 1zaw Z:2-28 [145975]
  Other proteins in same PDB: d1zawa1, d1zawa2
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
Domains for 1zax:
1. Domain d1zaxu1: 1zax U:1-30 [145977]
  Other proteins in same PDB: d1zaxa1
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
2. Domain d1zaxv1: 1zax V:1-30 [145978]
  Other proteins in same PDB: d1zaxa1
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
3. Domain d1zaxw1: 1zax W:1-30 [145979]
  Other proteins in same PDB: d1zaxa1
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
4. Domain d1zaxx1: 1zax X:1-29 [145980]
  Other proteins in same PDB: d1zaxa1
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
5. Domain d1zaxy1: 1zax Y:1-29 [145981]
  Other proteins in same PDB: d1zaxa1
  automatically matched to 1ZAV U:1-30
  protein/RNA complex
6. Domain d1zaxz1: 1zax Z:2-30 [145982]
  Other proteins in same PDB: d1zaxa1
  automatically matched to 1ZAV U:1-30
  protein/RNA complex

More info for Protein Ribosomal protein L7/12, oligomerisation (N-terminal) domain from a.108.1.1: Ribosomal protein L7/12, oligomerisation (N-terminal) domain

Timeline for Protein Ribosomal protein L7/12, oligomerisation (N-terminal) domain from a.108.1.1: Ribosomal protein L7/12, oligomerisation (N-terminal) domain:

Protein Ribosomal protein L7/12, oligomerisation (N-terminal) domain from a.108.1.1: Ribosomal protein L7/12, oligomerisation (N-terminal) domain first appeared (with stable ids) in SCOP 1.55
Protein Ribosomal protein L7/12, oligomerisation (N-terminal) domain from a.108.1.1: Ribosomal protein L7/12, oligomerisation (N-terminal) domain appears in SCOPe 2.06
Protein Ribosomal protein L7/12, oligomerisation (N-terminal) domain from a.108.1.1: Ribosomal protein L7/12, oligomerisation (N-terminal) domain appears in the current release, SCOPe 2.08