SCOPe 2.08: Protein: Trp repressor, TrpR

Lineage for Protein: Trp repressor, TrpR

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
Superfamily a.4.12: TrpR-like [48295] (4 families)
contains an extra shared helix after the HTH motif
Family a.4.12.1: Trp repressor, TrpR [48296] (2 proteins)
intertwined dimer of identical 6-helical subunits
automatically mapped to Pfam PF01371
Protein Trp repressor, TrpR [48297] (1 species)

Species:

Escherichia coli [TaxId:562] [48298] (19 PDB entries)
1. Domains for 1co0:
  1. Domain d1co0a_: 1co0 A: [90426]
    protein/DNA complex; complexed with trp
  2. Domain d1co0b_: 1co0 B: [90427]
    protein/DNA complex; complexed with trp
2. Domain for 1jhg:
  - Domain d1jhga_: 1jhg A: [19009]
    protein/DNA complex; complexed with po4, trp; mutant
3. Domain for 1mi7:
  - Domain d1mi7r_: 1mi7 R: [91278]
    domain swapped structure
    complexed with ipa
4. Domains for 1p6z:
  1. Domain d1p6zn_: 1p6z N: [302878]
    automated match to d1wrpr_
  2. Domain d1p6zr_: 1p6z R: [302879]
    automated match to d1wrpr_
5. Domains for 1rcs:
  1. Domain d1rcsa_: 1rcs A: [19025]
    protein/DNA complex; complexed with trp
  2. Domain d1rcsb_: 1rcs B: [19026]
    protein/DNA complex; complexed with trp
6. Domains for 1tro:
  1. Domain d1troa_: 1tro A: [19011]
    protein/DNA complex; complexed with trp
  2. Domain d1troc_: 1tro C: [19012]
    protein/DNA complex; complexed with trp
  3. Domain d1troe_: 1tro E: [19013]
    protein/DNA complex; complexed with trp
  4. Domain d1trog_: 1tro G: [19014]
    protein/DNA complex; complexed with trp
7. Domains for 1trr:
  1. Domain d1trra_: 1trr A: [19017]
    protein/DNA complex; complexed with trp
  2. Domain d1trrb_: 1trr B: [19018]
    protein/DNA complex; complexed with trp
  3. Domain d1trrd_: 1trr D: [19019]
    protein/DNA complex; complexed with trp
  4. Domain d1trre_: 1trr E: [19020]
    protein/DNA complex; complexed with trp
  5. Domain d1trrg_: 1trr G: [19021]
    protein/DNA complex; complexed with trp
  6. Domain d1trrh_: 1trr H: [19022]
    protein/DNA complex; complexed with trp
  7. Domain d1trrj_: 1trr J: [19023]
    protein/DNA complex; complexed with trp
  8. Domain d1trrk_: 1trr K: [19024]
    protein/DNA complex; complexed with trp
8. Domain for 1wrp:
  - Domain d1wrpr_: 1wrp R: [19016]
    complexed with trp
9. Domains for 1wrs:
  1. Domain d1wrsr_: 1wrs R: [19027]
    protein/DNA complex; complexed with trp
  2. Domain d1wrss_: 1wrs S: [19028]
    protein/DNA complex; complexed with trp
10. Domains for 1wrt:
  1. Domain d1wrtr_: 1wrt R: [19029]
  2. Domain d1wrts_: 1wrt S: [19030]
11. Domains for 1zt9:
  1. Domain d1zt9a_: 1zt9 A: [125631]
    automated match to d1co0a_
    complexed with so4, trp
  2. Domain d1zt9b_: 1zt9 B: [125632]
    automated match to d1co0a_
    complexed with so4, trp
  3. Domain d1zt9d_: 1zt9 D: [125633]
    automated match to d1co0a_
    complexed with so4, trp
  4. Domain d1zt9e_: 1zt9 E: [125634]
    automated match to d1co0a_
    complexed with so4, trp
12. Domain for 2oz9:
  - Domain d2oz9r_: 2oz9 R: [139442]
    automated match to d1co0a_
    complexed with na, so4, trp
13. Domain for 2wrp:
  - Domain d2wrpr_: 2wrp R: [304607]
    automated match to d1co0a_
    complexed with na, so4, trp
14. Domains for 3ssw:
  1. Domain d3sswn_: 3ssw N: [185509]
    automated match to d1co0a_
  2. Domain d3sswr_: 3ssw R: [185510]
    automated match to d1co0a_
15. Domains for 3ssx:
  1. Domain d3ssxn_: 3ssx N: [185511]
    automated match to d1co0a_
    complexed with tam; mutant
  2. Domain d3ssxr_: 3ssx R: [185512]
    automated match to d1co0a_
    complexed with tam; mutant
16. Domain for 3wrp:
  - Domain d3wrpa_: 3wrp A: [19015]
17. Domains for 6elb:
  1. Domain d6elba_: 6elb A: [364481]
    automated match to d5tm0a_
    complexed with iac
  2. Domain d6elbb_: 6elb B: [364451]
    automated match to d5tm0a_
    complexed with iac
18. Domains for 6elf:
  1. Domain d6elfa_: 6elf A: [364415]
    automated match to d5tm0a_
    complexed with iac
  2. Domain d6elfb_: 6elf B: [364431]
    automated match to d5tm0a_
    complexed with iac
19. Domains for 6elg:
  1. Domain d6elga_: 6elg A: [364477]
    automated match to d5tm0a_
    complexed with 3bo
  2. Domain d6elgb_: 6elg B: [364472]
    automated match to d5tm0a_
    complexed with 3bo

More info for Protein Trp repressor, TrpR from a.4.12.1: Trp repressor, TrpR

Timeline for Protein Trp repressor, TrpR from a.4.12.1: Trp repressor, TrpR:

Protein Trp repressor, TrpR from a.4.12.1: Trp repressor, TrpR first appeared (with stable ids) in SCOP 1.55, called Protein Trp repressor from a.107.1.1: Trp repressor
Protein Trp repressor, TrpR from a.4.12.1: Trp repressor, TrpR appears in SCOPe 2.07