Lineage for Protein: R1 subunit of ribonucleotide reductase, N-terminal domain

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2003476Fold a.98: R1 subunit of ribonucleotide reductase, N-terminal domain [48167] (1 superfamily)
    multihelical consists of two all-alpha subdomains
    subdomain 1 (residues 10-100) is a 4-helical bundle
  4. 2003477Superfamily a.98.1: R1 subunit of ribonucleotide reductase, N-terminal domain [48168] (1 family) (S)
  5. 2003478Family a.98.1.1: R1 subunit of ribonucleotide reductase, N-terminal domain [48169] (1 protein)
  6. 2003479Protein R1 subunit of ribonucleotide reductase, N-terminal domain [48170] (2 species)

Species:

  1. 2003480Escherichia coli [TaxId:562] [48171] (10 PDB entries)
    Uniprot Q08698
    1. Domains for 1r1r:
      1. 2003485Domain d1r1ra1: 1r1r A:4-221 [18754]
        Other proteins in same PDB: d1r1ra2, d1r1rb2, d1r1rc2
        mutant
      2. 2003486Domain d1r1rb1: 1r1r B:4-221 [18755]
        Other proteins in same PDB: d1r1ra2, d1r1rb2, d1r1rc2
        mutant
      3. 2003487Domain d1r1rc1: 1r1r C:4-221 [18756]
        Other proteins in same PDB: d1r1ra2, d1r1rb2, d1r1rc2
        mutant
    2. Domain for 1rlr:
    3. Domains for 2r1r:
      1. 2003497Domain d2r1ra1: 2r1r A:5-221 [18769]
        Other proteins in same PDB: d2r1ra2, d2r1rb2, d2r1rc2
        complexed with ttp
      2. 2003498Domain d2r1rb1: 2r1r B:5-221 [18770]
        Other proteins in same PDB: d2r1ra2, d2r1rb2, d2r1rc2
        complexed with ttp
      3. 2003499Domain d2r1rc1: 2r1r C:5-221 [18771]
        Other proteins in same PDB: d2r1ra2, d2r1rb2, d2r1rc2
        complexed with ttp
    4. Domains for 2x1y:
      1. 2003481Domain d2x1ya1: 2x1y A:4-221 [304623]
        Other proteins in same PDB: d2x1ya2, d2x1yb2, d2x1yc2
        automated match to d2r1ra1
      2. 2003482Domain d2x1yb1: 2x1y B:4-221 [304625]
        Other proteins in same PDB: d2x1ya2, d2x1yb2, d2x1yc2
        automated match to d2r1ra1
      3. 2003483Domain d2x1yc1: 2x1y C:4-221 [304627]
        Other proteins in same PDB: d2x1ya2, d2x1yb2, d2x1yc2
        automated match to d2r1ra1
    5. Domains for 3r1r:
      1. 2003500Domain d3r1ra1: 3r1r A:5-221 [18766]
        Other proteins in same PDB: d3r1ra2, d3r1rb2, d3r1rc2
        complexed with atp
      2. 2003501Domain d3r1rb1: 3r1r B:5-221 [18767]
        Other proteins in same PDB: d3r1ra2, d3r1rb2, d3r1rc2
        complexed with atp
      3. 2003502Domain d3r1rc1: 3r1r C:5-221 [18768]
        Other proteins in same PDB: d3r1ra2, d3r1rb2, d3r1rc2
        complexed with atp
    6. Domains for 4r1r:
      1. 2003503Domain d4r1ra1: 4r1r A:5-221 [18772]
        Other proteins in same PDB: d4r1ra2, d4r1rb2, d4r1rc2
        complexed with gdp, ttp
      2. 2003504Domain d4r1rb1: 4r1r B:5-221 [18773]
        Other proteins in same PDB: d4r1ra2, d4r1rb2, d4r1rc2
        complexed with gdp, ttp
      3. 2003505Domain d4r1rc1: 4r1r C:5-221 [18774]
        Other proteins in same PDB: d4r1ra2, d4r1rb2, d4r1rc2
        complexed with gdp, ttp
    7. Domains for 5cns:
      1. 2269494Domain d5cnsa1: 5cns A:5-221 [312800]
        Other proteins in same PDB: d5cnsa2, d5cnsb2, d5cnsc2, d5cnsd2
        automated match to d2r1ra1
        complexed with cdp, dat, dtp, feo, mg
      2. 2269514Domain d5cnsc1: 5cns C:5-221 [312820]
        Other proteins in same PDB: d5cnsa2, d5cnsb2, d5cnsc2, d5cnsd2
        automated match to d2r1ra1
        complexed with cdp, dat, dtp, feo, mg
      3. 2269548Domain d5cnsb1: 5cns B:4-221 [312852]
        Other proteins in same PDB: d5cnsa2, d5cnsb2, d5cnsc2, d5cnsd2
        automated match to d2r1ra1
        complexed with cdp, dat, dtp, feo, mg
      4. 2269551Domain d5cnsd1: 5cns D:4-221 [312855]
        Other proteins in same PDB: d5cnsa2, d5cnsb2, d5cnsc2, d5cnsd2
        automated match to d2r1ra1
        complexed with cdp, dat, dtp, feo, mg
    8. Domains for 5r1r:
      1. 2003488Domain d5r1ra1: 5r1r A:1-221 [18757]
        Other proteins in same PDB: d5r1ra2, d5r1rb2, d5r1rc2
        mutant
      2. 2003489Domain d5r1rb1: 5r1r B:1-221 [18758]
        Other proteins in same PDB: d5r1ra2, d5r1rb2, d5r1rc2
        mutant
      3. 2003490Domain d5r1rc1: 5r1r C:1-221 [18759]
        Other proteins in same PDB: d5r1ra2, d5r1rb2, d5r1rc2
        mutant
    9. Domains for 6r1r:
      1. 2003491Domain d6r1ra1: 6r1r A:1-221 [18760]
        Other proteins in same PDB: d6r1ra2, d6r1rb2, d6r1rc2
        mutant
      2. 2003492Domain d6r1rb1: 6r1r B:1-221 [18761]
        Other proteins in same PDB: d6r1ra2, d6r1rb2, d6r1rc2
        mutant
      3. 2003493Domain d6r1rc1: 6r1r C:1-221 [18762]
        Other proteins in same PDB: d6r1ra2, d6r1rb2, d6r1rc2
        mutant
    10. Domains for 7r1r:
      1. 2003494Domain d7r1ra1: 7r1r A:1-221 [18763]
        Other proteins in same PDB: d7r1ra2, d7r1rb2, d7r1rc2
        mutant
      2. 2003495Domain d7r1rb1: 7r1r B:1-221 [18764]
        Other proteins in same PDB: d7r1ra2, d7r1rb2, d7r1rc2
        mutant
      3. 2003496Domain d7r1rc1: 7r1r C:1-221 [18765]
        Other proteins in same PDB: d7r1ra2, d7r1rb2, d7r1rc2
        mutant
  2. 2003506Salmonella typhimurium [TaxId:90371] [109946] (5 PDB entries)
    1. Domain for 1pem:
    2. Domain for 1peo:
    3. Domain for 1peq:
    4. Domain for 1peu:
    5. Domains for 2bq1:
      1. 2003511Domain d2bq1e1: 2bq1 E:13-174 [128953]
        Other proteins in same PDB: d2bq1e2, d2bq1f2, d2bq1i1, d2bq1j1
        automatically matched to d1pema1
        protein/DNA complex; complexed with dgt, fe, mg
      2. 2003512Domain d2bq1f1: 2bq1 F:13-174 [128955]
        Other proteins in same PDB: d2bq1e2, d2bq1f2, d2bq1i1, d2bq1j1
        automatically matched to d1pema1
        protein/DNA complex; complexed with dgt, fe, mg

More info for Protein R1 subunit of ribonucleotide reductase, N-terminal domain from a.98.1.1: R1 subunit of ribonucleotide reductase, N-terminal domain

Timeline for Protein R1 subunit of ribonucleotide reductase, N-terminal domain from a.98.1.1: R1 subunit of ribonucleotide reductase, N-terminal domain:

  • Protein R1 subunit of ribonucleotide reductase, N-terminal domain from a.98.1.1: R1 subunit of ribonucleotide reductase, N-terminal domain first appeared (with stable ids) in SCOP 1.55
  • Protein R1 subunit of ribonucleotide reductase, N-terminal domain from a.98.1.1: R1 subunit of ribonucleotide reductase, N-terminal domain appears in SCOPe 2.05