SCOPe 2.05: Protein: Beta chain

Lineage for Protein: Beta chain

Root: SCOPe 2.05
Class a: All alpha proteins [46456] (286 folds)
Fold a.89: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain [48080] (1 superfamily)
multihelical bundle; contains buried central helix
Superfamily a.89.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain [48081] (2 families)
Family a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain [48082] (2 proteins)
C-terminal domain is all-alpha
Protein Beta chain [48087] (3 species)

Species:

Methanobacterium thermoautotrophicum [TaxId:145262] [48088] (11 PDB entries)

Domains for 1hbm:
1. Domain d1hbmb1: 1hbm B:189-443 [60890]
  Other proteins in same PDB: d1hbma1, d1hbma2, d1hbmb2, d1hbmc_, d1hbmd1, d1hbmd2, d1hbme2, d1hbmf_
  complexed with cl, f43, gol, mg, na, sht, zn
2. Domain d1hbme1: 1hbm E:189-443 [60895]
  Other proteins in same PDB: d1hbma1, d1hbma2, d1hbmb2, d1hbmc_, d1hbmd1, d1hbmd2, d1hbme2, d1hbmf_
  complexed with cl, f43, gol, mg, na, sht, zn
Domains for 1hbn:
1. Domain d1hbnb1: 1hbn B:189-443 [60900]
  Other proteins in same PDB: d1hbna1, d1hbna2, d1hbnb2, d1hbnc_, d1hbnd1, d1hbnd2, d1hbne2, d1hbnf_
  complexed with cl, com, f43, gol, mg, na, tp7, zn
2. Domain d1hbne1: 1hbn E:189-443 [60905]
  Other proteins in same PDB: d1hbna1, d1hbna2, d1hbnb2, d1hbnc_, d1hbnd1, d1hbnd2, d1hbne2, d1hbnf_
  complexed with cl, com, f43, gol, mg, na, tp7, zn
Domains for 1hbo:
1. Domain d1hbob1: 1hbo B:189-443 [60910]
  Other proteins in same PDB: d1hboa1, d1hboa2, d1hbob2, d1hboc_, d1hbod1, d1hbod2, d1hboe2, d1hbof_
  complexed with cl, com, f43, gol, mg, na, tp7, zn
2. Domain d1hboe1: 1hbo E:189-443 [60915]
  Other proteins in same PDB: d1hboa1, d1hboa2, d1hbob2, d1hboc_, d1hbod1, d1hbod2, d1hboe2, d1hbof_
  complexed with cl, com, f43, gol, mg, na, tp7, zn
Domains for 1hbu:
1. Domain d1hbub1: 1hbu B:189-443 [60920]
  Other proteins in same PDB: d1hbua1, d1hbua2, d1hbub2, d1hbuc_, d1hbud1, d1hbud2, d1hbue2, d1hbuf_
  complexed with cl, com, f43, gol, mg, na, tp7, zn
2. Domain d1hbue1: 1hbu E:189-443 [60925]
  Other proteins in same PDB: d1hbua1, d1hbua2, d1hbub2, d1hbuc_, d1hbud1, d1hbud2, d1hbue2, d1hbuf_
  complexed with cl, com, f43, gol, mg, na, tp7, zn
Domains for 1mro:
1. Domain d1mrob1: 1mro B:189-443 [18531]
  Other proteins in same PDB: d1mroa1, d1mroa2, d1mrob2, d1mroc_, d1mrod1, d1mrod2, d1mroe2, d1mrof_
  complexed with com, f43, gol, na, tp7, zn
2. Domain d1mroe1: 1mro E:189-443 [18532]
  Other proteins in same PDB: d1mroa1, d1mroa2, d1mrob2, d1mroc_, d1mrod1, d1mrod2, d1mroe2, d1mrof_
  complexed with com, f43, gol, na, tp7, zn

Domains for 3m1v:

Domain d3m1vb2: 3m1v B:189-443 [199772]
Other proteins in same PDB: d3m1va1, d3m1va2, d3m1vb1, d3m1vc_, d3m1vd1, d3m1vd2, d3m1ve1, d3m1vf_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, peg, tp7, zn

Domain d3m1ve2: 3m1v E:189-443 [199776]
Other proteins in same PDB: d3m1va1, d3m1va2, d3m1vb1, d3m1vc_, d3m1vd1, d3m1vd2, d3m1ve1, d3m1vf_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, peg, tp7, zn

Domains for 3m2r:

Domain d3m2rb2: 3m2r B:189-443 [199780]
Other proteins in same PDB: d3m2ra1, d3m2ra2, d3m2rb1, d3m2rc_, d3m2rd1, d3m2rd2, d3m2re1, d3m2rf_
automated match to d1hbnb1
complexed with com, edo, f43, mg, peg, tp7, tpz, zn

Domain d3m2re2: 3m2r E:189-443 [199784]
Other proteins in same PDB: d3m2ra1, d3m2ra2, d3m2rb1, d3m2rc_, d3m2rd1, d3m2rd2, d3m2re1, d3m2rf_
automated match to d1hbnb1
complexed with com, edo, f43, mg, peg, tp7, tpz, zn

Domains for 3m2u:

Domain d3m2ub2: 3m2u B:189-443 [199788]
Other proteins in same PDB: d3m2ua1, d3m2ua2, d3m2ub1, d3m2uc_, d3m2ud1, d3m2ud2, d3m2ue1, d3m2uf_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, peg, tp7, txz, zn

Domain d3m2ue2: 3m2u E:189-443 [199792]
Other proteins in same PDB: d3m2ua1, d3m2ua2, d3m2ub1, d3m2uc_, d3m2ud1, d3m2ud2, d3m2ue1, d3m2uf_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, peg, tp7, txz, zn

Domains for 3m2v:

Domain d3m2vb2: 3m2v B:189-443 [199796]
Other proteins in same PDB: d3m2va1, d3m2va2, d3m2vb1, d3m2vc_, d3m2vd1, d3m2vd2, d3m2ve1, d3m2vf_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, tp7, xp8, zn

Domain d3m2ve2: 3m2v E:189-443 [199800]
Other proteins in same PDB: d3m2va1, d3m2va2, d3m2vb1, d3m2vc_, d3m2vd1, d3m2vd2, d3m2ve1, d3m2vf_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, tp7, xp8, zn

Domains for 3m30:

Domain d3m30b2: 3m30 B:189-443 [199804]
Other proteins in same PDB: d3m30a1, d3m30a2, d3m30b1, d3m30c_, d3m30d1, d3m30d2, d3m30e1, d3m30f_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, peg, tp7, xp9, zn

Domain d3m30e2: 3m30 E:189-443 [199808]
Other proteins in same PDB: d3m30a1, d3m30a2, d3m30b1, d3m30c_, d3m30d1, d3m30d2, d3m30e1, d3m30f_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, peg, tp7, xp9, zn

Domains for 3m32:

Domain d3m32b2: 3m32 B:189-443 [199812]
Other proteins in same PDB: d3m32a1, d3m32a2, d3m32b1, d3m32c_, d3m32d1, d3m32d2, d3m32e1, d3m32f_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, peg, sht, tp7, zn

Domain d3m32e2: 3m32 E:189-443 [199816]
Other proteins in same PDB: d3m32a1, d3m32a2, d3m32b1, d3m32c_, d3m32d1, d3m32d2, d3m32e1, d3m32f_
automated match to d1hbnb1
complexed with act, com, edo, f43, mg, peg, sht, tp7, zn

Methanopyrus kandleri [TaxId:2320] [48089] (1 PDB entry)
- Domains for 1e6v:
  1. Domain d1e6vb1: 1e6v B:190-442 [18533]
    Other proteins in same PDB: d1e6va1, d1e6va2, d1e6vb2, d1e6vc_, d1e6vd1, d1e6vd2, d1e6ve2, d1e6vf_
    complexed with com, f43, tp7
  2. Domain d1e6ve1: 1e6v E:190-442 [18534]
    Other proteins in same PDB: d1e6va1, d1e6va2, d1e6vb2, d1e6vc_, d1e6vd1, d1e6vd2, d1e6ve2, d1e6vf_
    complexed with com, f43, tp7
Methanosarcina barkeri [TaxId:2208] [48090] (1 PDB entry)
- Domains for 1e6y:
  1. Domain d1e6yb1: 1e6y B:2186-2433 [18535]
    Other proteins in same PDB: d1e6ya1, d1e6ya2, d1e6yb2, d1e6yc_, d1e6yd1, d1e6yd2, d1e6ye2, d1e6yf_
    complexed with com, f43, gol, tp7
  2. Domain d1e6ye1: 1e6y E:5186-5434 [18536]
    Other proteins in same PDB: d1e6ya1, d1e6ya2, d1e6yb2, d1e6yc_, d1e6yd1, d1e6yd2, d1e6ye2, d1e6yf_
    complexed with com, f43, gol, tp7

More info for Protein Beta chain from a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain

Timeline for Protein Beta chain from a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain:

Protein Beta chain from a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain first appeared (with stable ids) in SCOP 1.55
Protein Beta chain from a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain appears in SCOPe 2.04
Protein Beta chain from a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain appears in SCOPe 2.06
Protein Beta chain from a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain appears in the current release, SCOPe 2.08