Lineage for Protein: Alpha chain

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2002224Fold a.89: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain [48080] (1 superfamily)
    multihelical bundle; contains buried central helix
  4. 2002225Superfamily a.89.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain [48081] (2 families) (S)
  5. 2002226Family a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain [48082] (3 protein domains)
    C-terminal domain is all-alpha
  6. 2002227Protein Alpha chain [48083] (3 species)

Species:

  1. 2002228Methanobacterium thermoautotrophicum [TaxId:145262] [48084] (11 PDB entries)
    1. Domains for 1hbm:
      1. 2002237Domain d1hbma1: 1hbm A:270-549 [60888]
        Other proteins in same PDB: d1hbma2, d1hbmb1, d1hbmb2, d1hbmc_, d1hbmd2, d1hbme1, d1hbme2, d1hbmf_
        complexed with cl, f43, gol, mg, na, sht, zn
      2. 2002238Domain d1hbmd1: 1hbm D:270-549 [60893]
        Other proteins in same PDB: d1hbma2, d1hbmb1, d1hbmb2, d1hbmc_, d1hbmd2, d1hbme1, d1hbme2, d1hbmf_
        complexed with cl, f43, gol, mg, na, sht, zn
    2. Domains for 1hbn:
      1. 2002229Domain d1hbna1: 1hbn A:270-549 [60898]
        Other proteins in same PDB: d1hbna2, d1hbnb1, d1hbnb2, d1hbnc_, d1hbnd2, d1hbne1, d1hbne2, d1hbnf_
        complexed with cl, com, f43, gol, mg, na, tp7, zn
      2. 2002230Domain d1hbnd1: 1hbn D:270-549 [60903]
        Other proteins in same PDB: d1hbna2, d1hbnb1, d1hbnb2, d1hbnc_, d1hbnd2, d1hbne1, d1hbne2, d1hbnf_
        complexed with cl, com, f43, gol, mg, na, tp7, zn
    3. Domains for 1hbo:
      1. 2002245Domain d1hboa1: 1hbo A:270-549 [60908]
        Other proteins in same PDB: d1hboa2, d1hbob1, d1hbob2, d1hboc_, d1hbod2, d1hboe1, d1hboe2, d1hbof_
        complexed with cl, com, f43, gol, mg, na, tp7, zn
      2. 2002246Domain d1hbod1: 1hbo D:270-549 [60913]
        Other proteins in same PDB: d1hboa2, d1hbob1, d1hbob2, d1hboc_, d1hbod2, d1hboe1, d1hboe2, d1hbof_
        complexed with cl, com, f43, gol, mg, na, tp7, zn
    4. Domains for 1hbu:
      1. 2002249Domain d1hbua1: 1hbu A:270-549 [60918]
        Other proteins in same PDB: d1hbua2, d1hbub1, d1hbub2, d1hbuc_, d1hbud2, d1hbue1, d1hbue2, d1hbuf_
        complexed with cl, com, f43, gol, mg, na, tp7, zn
      2. 2002250Domain d1hbud1: 1hbu D:270-549 [60923]
        Other proteins in same PDB: d1hbua2, d1hbub1, d1hbub2, d1hbuc_, d1hbud2, d1hbue1, d1hbue2, d1hbuf_
        complexed with cl, com, f43, gol, mg, na, tp7, zn
    5. Domains for 1mro:
      1. 2002231Domain d1mroa1: 1mro A:270-549 [18525]
        Other proteins in same PDB: d1mroa2, d1mrob1, d1mrob2, d1mroc_, d1mrod2, d1mroe1, d1mroe2, d1mrof_
        complexed with com, f43, gol, na, tp7, zn
      2. 2002232Domain d1mrod1: 1mro D:270-549 [18526]
        Other proteins in same PDB: d1mroa2, d1mrob1, d1mrob2, d1mroc_, d1mrod2, d1mroe1, d1mroe2, d1mrof_
        complexed with com, f43, gol, na, tp7, zn
    6. Domains for 3m1v:
      1. 2002241Domain d3m1va2: 3m1v A:270-549 [199770]
        Other proteins in same PDB: d3m1va1, d3m1vb1, d3m1vb2, d3m1vc_, d3m1vd1, d3m1ve1, d3m1ve2, d3m1vf_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, peg, tp7, zn
      2. 2002242Domain d3m1vd2: 3m1v D:270-549 [199774]
        Other proteins in same PDB: d3m1va1, d3m1vb1, d3m1vb2, d3m1vc_, d3m1vd1, d3m1ve1, d3m1ve2, d3m1vf_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, peg, tp7, zn
    7. Domains for 3m2r:
      1. 2002233Domain d3m2ra2: 3m2r A:270-549 [199778]
        Other proteins in same PDB: d3m2ra1, d3m2rb1, d3m2rb2, d3m2rc_, d3m2rd1, d3m2re1, d3m2re2, d3m2rf_
        automated match to d1hbna1
        complexed with com, edo, f43, mg, peg, tp7, tpz, zn
      2. 2002234Domain d3m2rd2: 3m2r D:270-549 [199782]
        Other proteins in same PDB: d3m2ra1, d3m2rb1, d3m2rb2, d3m2rc_, d3m2rd1, d3m2re1, d3m2re2, d3m2rf_
        automated match to d1hbna1
        complexed with com, edo, f43, mg, peg, tp7, tpz, zn
    8. Domains for 3m2u:
      1. 2002239Domain d3m2ua2: 3m2u A:270-549 [199786]
        Other proteins in same PDB: d3m2ua1, d3m2ub1, d3m2ub2, d3m2uc_, d3m2ud1, d3m2ue1, d3m2ue2, d3m2uf_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, peg, tp7, txz, zn
      2. 2002240Domain d3m2ud2: 3m2u D:270-549 [199790]
        Other proteins in same PDB: d3m2ua1, d3m2ub1, d3m2ub2, d3m2uc_, d3m2ud1, d3m2ue1, d3m2ue2, d3m2uf_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, peg, tp7, txz, zn
    9. Domains for 3m2v:
      1. 2002247Domain d3m2va2: 3m2v A:270-549 [199794]
        Other proteins in same PDB: d3m2va1, d3m2vb1, d3m2vb2, d3m2vc_, d3m2vd1, d3m2ve1, d3m2ve2, d3m2vf_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, tp7, xp8, zn
      2. 2002248Domain d3m2vd2: 3m2v D:270-549 [199798]
        Other proteins in same PDB: d3m2va1, d3m2vb1, d3m2vb2, d3m2vc_, d3m2vd1, d3m2ve1, d3m2ve2, d3m2vf_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, tp7, xp8, zn
    10. Domains for 3m30:
      1. 2002243Domain d3m30a2: 3m30 A:270-549 [199802]
        Other proteins in same PDB: d3m30a1, d3m30b1, d3m30b2, d3m30c_, d3m30d1, d3m30e1, d3m30e2, d3m30f_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, peg, tp7, xp9, zn
      2. 2002244Domain d3m30d2: 3m30 D:270-549 [199806]
        Other proteins in same PDB: d3m30a1, d3m30b1, d3m30b2, d3m30c_, d3m30d1, d3m30e1, d3m30e2, d3m30f_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, peg, tp7, xp9, zn
    11. Domains for 3m32:
      1. 2002235Domain d3m32a2: 3m32 A:270-549 [199810]
        Other proteins in same PDB: d3m32a1, d3m32b1, d3m32b2, d3m32c_, d3m32d1, d3m32e1, d3m32e2, d3m32f_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, peg, sht, tp7, zn
      2. 2002236Domain d3m32d2: 3m32 D:270-549 [199814]
        Other proteins in same PDB: d3m32a1, d3m32b1, d3m32b2, d3m32c_, d3m32d1, d3m32e1, d3m32e2, d3m32f_
        automated match to d1hbna1
        complexed with act, com, edo, f43, mg, peg, sht, tp7, zn
  2. 2002251Methanopyrus kandleri [TaxId:2320] [48085] (1 PDB entry)
  3. 2002254Methanosarcina barkeri [TaxId:2208] [48086] (1 PDB entry)

More info for Protein Alpha chain from a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain

Timeline for Protein Alpha chain from a.89.1.1: Methyl-coenzyme M reductase alpha and beta chain C-terminal domain: