SCOPe 2.08: Species: Corynebacterium diphtheriae [TaxId: 1717]

Lineage for Species: Corynebacterium diphtheriae [TaxId: 1717]

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.76: Iron-dependent repressor protein, dimerization domain [47978] (1 superfamily)
6 helices, homodimer of 3-helical domains
Superfamily a.76.1: Iron-dependent repressor protein, dimerization domain [47979] (2 families)
automatically mapped to Pfam PF02742
Family a.76.1.1: Iron-dependent repressor protein, dimerization domain [47980] (4 proteins)
Protein Diphtheria toxin repressor (DtxR) [47981] (1 species)
Species Corynebacterium diphtheriae [TaxId:1717] [47982] (20 PDB entries)
Uniprot P33120

PDB entries in Species: Corynebacterium diphtheriae [TaxId: 1717]:

Domain(s) for 1bi0:
- Domain d1bi0a2: 1bi0 A:65-140 [18408]
  Other proteins in same PDB: d1bi0a1, d1bi0a3
  complexed with so4, zn
Domain(s) for 1bi1:
- Domain d1bi1a2: 1bi1 A:65-140 [18402]
  Other proteins in same PDB: d1bi1a1, d1bi1a3
Domain(s) for 1bi2:
1. Domain d1bi2a2: 1bi2 A:65-140 [18403]
  Other proteins in same PDB: d1bi2a1, d1bi2a3, d1bi2b1
2. Domain d1bi2b2: 1bi2 B:65-140 [18404]
  Other proteins in same PDB: d1bi2a1, d1bi2a3, d1bi2b1
Domain(s) for 1bi3:
1. Domain d1bi3a2: 1bi3 A:65-140 [18405]
  Other proteins in same PDB: d1bi3a1, d1bi3a3, d1bi3b1
  complexed with so4, zn
2. Domain d1bi3b2: 1bi3 B:65-140 [18406]
  Other proteins in same PDB: d1bi3a1, d1bi3a3, d1bi3b1
  complexed with so4, zn
Domain(s) for 1c0w:
1. Domain d1c0wa2: 1c0w A:65-140 [18417]
  Other proteins in same PDB: d1c0wa1, d1c0wa3, d1c0wb1, d1c0wb3, d1c0wc1, d1c0wc3, d1c0wd1, d1c0wd3
  protein/DNA complex; complexed with co
2. Domain d1c0wb2: 1c0w B:65-140 [18418]
  Other proteins in same PDB: d1c0wa1, d1c0wa3, d1c0wb1, d1c0wb3, d1c0wc1, d1c0wc3, d1c0wd1, d1c0wd3
  protein/DNA complex; complexed with co
3. Domain d1c0wc2: 1c0w C:65-140 [18419]
  Other proteins in same PDB: d1c0wa1, d1c0wa3, d1c0wb1, d1c0wb3, d1c0wc1, d1c0wc3, d1c0wd1, d1c0wd3
  protein/DNA complex; complexed with co
4. Domain d1c0wd2: 1c0w D:65-140 [18420]
  Other proteins in same PDB: d1c0wa1, d1c0wa3, d1c0wb1, d1c0wb3, d1c0wc1, d1c0wc3, d1c0wd1, d1c0wd3
  protein/DNA complex; complexed with co
Domain(s) for 1ddn:
1. Domain d1ddna2: 1ddn A:65-120 [18413]
  Other proteins in same PDB: d1ddna1, d1ddnb1, d1ddnc1, d1ddnd1
  protein/DNA complex; complexed with ni; mutant
2. Domain d1ddnb2: 1ddn B:65-120 [18414]
  Other proteins in same PDB: d1ddna1, d1ddnb1, d1ddnc1, d1ddnd1
  protein/DNA complex; complexed with ni; mutant
3. Domain d1ddnc2: 1ddn C:65-120 [18415]
  Other proteins in same PDB: d1ddna1, d1ddnb1, d1ddnc1, d1ddnd1
  protein/DNA complex; complexed with ni; mutant
4. Domain d1ddnd2: 1ddn D:65-120 [18416]
  Other proteins in same PDB: d1ddna1, d1ddnb1, d1ddnc1, d1ddnd1
  protein/DNA complex; complexed with ni; mutant
Domain(s) for 1dpr:
1. Domain d1dpra2: 1dpr A:65-136 [18400]
  Other proteins in same PDB: d1dpra1, d1dprb1
2. Domain d1dprb2: 1dpr B:65-136 [18401]
  Other proteins in same PDB: d1dpra1, d1dprb1
Domain(s) for 1f5t:
1. Domain d1f5ta2: 1f5t A:1065-1121 [18409]
  Other proteins in same PDB: d1f5ta1, d1f5tb1, d1f5tc1, d1f5td1
  protein/DNA complex; complexed with ni; mutant
2. Domain d1f5tb2: 1f5t B:2065-2121 [18410]
  Other proteins in same PDB: d1f5ta1, d1f5tb1, d1f5tc1, d1f5td1
  protein/DNA complex; complexed with ni; mutant
3. Domain d1f5tc2: 1f5t C:3065-3121 [18411]
  Other proteins in same PDB: d1f5ta1, d1f5tb1, d1f5tc1, d1f5td1
  protein/DNA complex; complexed with ni; mutant
4. Domain d1f5td2: 1f5t D:4065-4121 [18412]
  Other proteins in same PDB: d1f5ta1, d1f5tb1, d1f5tc1, d1f5td1
  protein/DNA complex; complexed with ni; mutant
Domain(s) for 1fwz:
- Domain d1fwza2: 1fwz A:65-140 [60078]
  Other proteins in same PDB: d1fwza1, d1fwza3
  complexed with so4, zn
Domain(s) for 1g3s:
- Domain d1g3sa2: 1g3s A:65-140 [65125]
  Other proteins in same PDB: d1g3sa1, d1g3sa3
Domain(s) for 1g3t:
1. Domain d1g3ta2: 1g3t A:65-140 [65128]
  Other proteins in same PDB: d1g3ta1, d1g3ta3, d1g3tb1
2. Domain d1g3tb2: 1g3t B:1065-1140 [65131]
  Other proteins in same PDB: d1g3ta1, d1g3ta3, d1g3tb1
Domain(s) for 1g3w:
- Domain d1g3wa2: 1g3w A:65-140 [65134]
  Other proteins in same PDB: d1g3wa1, d1g3wa3
  complexed with cd, so4
Domain(s) for 1g3y:
- Domain d1g3ya2: 1g3y A:65-140 [65137]
  Other proteins in same PDB: d1g3ya1, d1g3ya3
  complexed with zn
Domain(s) for 1p92:
- Domain d1p92a2: 1p92 A:65-139 [104086]
  Other proteins in same PDB: d1p92a1, d1p92a3
  complexed with bme
Domain(s) for 1xcv:
- Domain d1xcva2: 1xcv A:65-139 [121863]
  Other proteins in same PDB: d1xcva1
  automated match to d2tdxa2
  protein/DNA complex; complexed with ni; mutant
Domain(s) for 2dtr:
- Domain d2dtra2: 2dtr A:65-140 [18399]
  Other proteins in same PDB: d2dtra1, d2dtra3
  complexed with co, so4
Domain(s) for 2qq9:
- Domain d2qq9a2: 2qq9 A:65-139 [243622]
  Other proteins in same PDB: d2qq9a1, d2qq9a3
  automated match to d2dtra2
  protein/DNA complex; complexed with ni, po4
Domain(s) for 2qqa:
- Domain d2qqaa2: 2qqa A:65-140 [243625]
  Other proteins in same PDB: d2qqaa1, d2qqaa3
  automated match to d2dtra2
  protein/DNA complex; complexed with ni, po4
Domain(s) for 2qqb:
- Domain d2qqba2: 2qqb A:65-139 [243628]
  Other proteins in same PDB: d2qqba1, d2qqba3
  automated match to d2dtra2
  protein/DNA complex; complexed with ni, po4
Domain(s) for 2tdx:
- Domain d2tdxa2: 2tdx A:65-139 [18407]
  Other proteins in same PDB: d2tdxa1
  protein/DNA complex; complexed with ni; mutant

More info for Species Corynebacterium diphtheriae [TaxId:1717] from a.76.1.1 Diphtheria toxin repressor (DtxR)

Timeline for Species Corynebacterium diphtheriae [TaxId:1717] from a.76.1.1 Diphtheria toxin repressor (DtxR):

Species Corynebacterium diphtheriae [TaxId:1717] from a.76.1.1 Diphtheria toxin repressor (DtxR) first appeared (with stable ids) in SCOP 1.55
Species Corynebacterium diphtheriae [TaxId:1717] from a.76.1.1 Diphtheria toxin repressor (DtxR) appears in SCOPe 2.07