Lineage for Species: Human immunodeficiency virus type 1 [TaxId: 11676]

  1. Root: SCOPe 2.02
  2. 1074916Class a: All alpha proteins [46456] (284 folds)
  3. 1091822Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
    core: 5 helices; bundle
  4. 1091823Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (1 family) (S)
  5. 1091824Family a.73.1.1: Retrovirus capsid protein, N-terminal core domain [47944] (6 proteins)
  6. 1091863Protein HIV-1 capsid protein [47945] (1 species)
  7. 1091864Species Human immunodeficiency virus type 1 [TaxId:11676] [47946] (19 PDB entries)

PDB entries in Species: Human immunodeficiency virus type 1 [TaxId: 11676]:

  1. Domain(s) for 1afv:
    1. 1091906Domain d1afva_: 1afv A: [18324]
      Other proteins in same PDB: d1afvh1, d1afvh2, d1afvk1, d1afvk2, d1afvl1, d1afvl2, d1afvm1, d1afvm2
      complexed with pb
    2. 1091907Domain d1afvb_: 1afv B: [18325]
      Other proteins in same PDB: d1afvh1, d1afvh2, d1afvk1, d1afvk2, d1afvl1, d1afvl2, d1afvm1, d1afvm2
      complexed with pb
  2. Domain(s) for 1ak4:
    1. 1091903Domain d1ak4c_: 1ak4 C: [18321]
      Other proteins in same PDB: d1ak4a_, d1ak4b_
    2. 1091904Domain d1ak4d_: 1ak4 D: [18322]
      Other proteins in same PDB: d1ak4a_, d1ak4b_
  3. Domain(s) for 1e6j:
  4. Domain(s) for 1gwp:
  5. Domain(s) for 1l6n:
  6. Domain(s) for 1m9c:
    1. 1091899Domain d1m9cc_: 1m9c C: [84888]
      Other proteins in same PDB: d1m9ca_, d1m9cb_
    2. 1091900Domain d1m9cd_: 1m9c D: [84889]
      Other proteins in same PDB: d1m9ca_, d1m9cb_
  7. Domain(s) for 1m9d:
    1. 1091883Domain d1m9dc_: 1m9d C: [84892]
      Other proteins in same PDB: d1m9da_, d1m9db_
    2. 1091884Domain d1m9dd_: 1m9d D: [84893]
      Other proteins in same PDB: d1m9da_, d1m9db_
  8. Domain(s) for 1m9e:
    1. 1091877Domain d1m9ec_: 1m9e C: [84896]
      Other proteins in same PDB: d1m9ea_, d1m9eb_
    2. 1091878Domain d1m9ed_: 1m9e D: [84897]
      Other proteins in same PDB: d1m9ea_, d1m9eb_
  9. Domain(s) for 1m9f:
    1. 1091869Domain d1m9fc_: 1m9f C: [84900]
      Other proteins in same PDB: d1m9fa_, d1m9fb_
    2. 1091870Domain d1m9fd_: 1m9f D: [84901]
      Other proteins in same PDB: d1m9fa_, d1m9fb_
  10. Domain(s) for 1m9x:
    1. 1091871Domain d1m9xc_: 1m9x C: [84907]
      Other proteins in same PDB: d1m9xa_, d1m9xb_, d1m9xe_, d1m9xf_
    2. 1091872Domain d1m9xd_: 1m9x D: [84908]
      Other proteins in same PDB: d1m9xa_, d1m9xb_, d1m9xe_, d1m9xf_
    3. 1091873Domain d1m9xg_: 1m9x G: [84911]
      Other proteins in same PDB: d1m9xa_, d1m9xb_, d1m9xe_, d1m9xf_
    4. 1091874Domain d1m9xh_: 1m9x H: [84912]
      Other proteins in same PDB: d1m9xa_, d1m9xb_, d1m9xe_, d1m9xf_
  11. Domain(s) for 1m9y:
    1. 1091879Domain d1m9yc_: 1m9y C: [84915]
      Other proteins in same PDB: d1m9ya_, d1m9yb_, d1m9ye_, d1m9yf_
    2. 1091880Domain d1m9yd_: 1m9y D: [84916]
      Other proteins in same PDB: d1m9ya_, d1m9yb_, d1m9ye_, d1m9yf_
    3. 1091881Domain d1m9yg_: 1m9y G: [84919]
      Other proteins in same PDB: d1m9ya_, d1m9yb_, d1m9ye_, d1m9yf_
    4. 1091882Domain d1m9yh_: 1m9y H: [84920]
      Other proteins in same PDB: d1m9ya_, d1m9yb_, d1m9ye_, d1m9yf_
  12. Domain(s) for 2gol:
    1. 1091901Domain d2golb_: 2gol B: [135439]
      Other proteins in same PDB: d2gola_
      automated match to d1afva_
      complexed with so4
    2. 1091902Domain d2gold_: 2gol D: [135440]
      Other proteins in same PDB: d2gola_
      automated match to d1afva_
      complexed with so4
  13. Domain(s) for 2gon:
    1. 1091895Domain d2gona_: 2gon A: [164784]
      automated match to d1afva_
      complexed with flc
    2. 1091896Domain d2gonb_: 2gon B: [164785]
      automated match to d1afva_
      complexed with flc
    3. 1091897Domain d2gonc_: 2gon C: [164786]
      automated match to d1afva_
      complexed with flc
    4. 1091898Domain d2gond_: 2gon D: [164787]
      automated match to d1afva_
      complexed with flc
  14. Domain(s) for 2jpr:
  15. Domain(s) for 2pwm:
    1. 1091887Domain d2pwma_: 2pwm A: [167302]
      automated match to d1afva_
      complexed with cl
    2. 1091888Domain d2pwmb_: 2pwm B: [167303]
      automated match to d1afva_
      complexed with cl
    3. 1091889Domain d2pwmc_: 2pwm C: [167304]
      automated match to d1afva_
      complexed with cl
    4. 1091890Domain d2pwmd_: 2pwm D: [167305]
      automated match to d1afva_
      complexed with cl
    5. 1091891Domain d2pwme_: 2pwm E: [167306]
      automated match to d1afva_
      complexed with cl
    6. 1091892Domain d2pwmf_: 2pwm F: [167307]
      automated match to d1afva_
      complexed with cl
    7. 1091893Domain d2pwmg_: 2pwm G: [167308]
      automated match to d1afva_
      complexed with cl
    8. 1091894Domain d2pwmh_: 2pwm H: [167309]
      automated match to d1afva_
      complexed with cl
  16. Domain(s) for 2pwo:
    1. 1091865Domain d2pwoa_: 2pwo A: [167310]
      automated match to d1afva_
      complexed with cl
    2. 1091866Domain d2pwob_: 2pwo B: [167311]
      automated match to d1afva_
      complexed with cl
    3. 1091867Domain d2pwoc_: 2pwo C: [167312]
      automated match to d1afva_
      complexed with cl
    4. 1091868Domain d2pwod_: 2pwo D: [167313]
      automated match to d1afva_
      complexed with cl
  17. Domain(s) for 3dik:
  18. Domain(s) for 4dga:
    1. 1091885Domain d4dgac_: 4dga C: [196071]
      Other proteins in same PDB: d4dgaa_, d4dgab_
      automated match to d1m9dc_
    2. 1091886Domain d4dgad_: 4dga D: [196072]
      Other proteins in same PDB: d4dgaa_, d4dgab_
      automated match to d1m9dc_
  19. Domain(s) for 4e91:
    1. 1091875Domain d4e91a_: 4e91 A: [197294]
      automated match to d1afva_
      complexed with 0oe, 0of, iod
    2. 1091876Domain d4e91b_: 4e91 B: [197293]
      automated match to d1afva_
      complexed with 0oe, 0of, iod

More info for Species Human immunodeficiency virus type 1 [TaxId:11676] from a.73.1.1 HIV-1 capsid protein

Timeline for Species Human immunodeficiency virus type 1 [TaxId:11676] from a.73.1.1 HIV-1 capsid protein: