SCOP 1.71: Protein: HIV-1 capsid protein

Lineage for Protein: HIV-1 capsid protein

Root: SCOP 1.71
Class a: All alpha proteins [46456] (226 folds)
Fold a.73: Retrovirus capsid protein, N-terminal core domain [47942] (1 superfamily)
core: 5 helices; bundle
Superfamily a.73.1: Retrovirus capsid protein, N-terminal core domain [47943] (1 family)
Family a.73.1.1: Retrovirus capsid protein, N-terminal core domain [47944] (5 proteins)
Protein HIV-1 capsid protein [47945] (1 species)

Species:

Human immunodeficiency virus type 1 [TaxId:11676] [47946] (11 PDB entries)
1. Domains for 1afv:
  1. Domain d1afva_: 1afv A: [18324]
    Other proteins in same PDB: d1afvh1, d1afvh2, d1afvk1, d1afvk2, d1afvl1, d1afvl2, d1afvm1, d1afvm2
  2. Domain d1afvb_: 1afv B: [18325]
    Other proteins in same PDB: d1afvh1, d1afvh2, d1afvk1, d1afvk2, d1afvl1, d1afvl2, d1afvm1, d1afvm2
    complexed with pb
2. Domains for 1ak4:
  1. Domain d1ak4c_: 1ak4 C: [18321]
    Other proteins in same PDB: d1ak4a_, d1ak4b_
  2. Domain d1ak4d_: 1ak4 D: [18322]
    Other proteins in same PDB: d1ak4a_, d1ak4b_
    mutant
3. Domain for 1e6j:
  - Domain d1e6jp2: 1e6j P:11-147 [18323]
    Other proteins in same PDB: d1e6jh1, d1e6jh2, d1e6jl1, d1e6jl2, d1e6jp1
    mutant
4. Domain for 1gwp:
  - Domain d1gwpa_: 1gwp A: [70674]
5. Domain for 1l6n:
  - Domain d1l6na2: 1l6n A:131-289 [73625]
    Other proteins in same PDB: d1l6na1
6. Domains for 1m9c:
  1. Domain d1m9cc_: 1m9c C: [84888]
    Other proteins in same PDB: d1m9ca_, d1m9cb_
  2. Domain d1m9cd_: 1m9c D: [84889]
    Other proteins in same PDB: d1m9ca_, d1m9cb_
7. Domains for 1m9d:
  1. Domain d1m9dc_: 1m9d C: [84892]
    Other proteins in same PDB: d1m9da_, d1m9db_
  2. Domain d1m9dd_: 1m9d D: [84893]
    Other proteins in same PDB: d1m9da_, d1m9db_
    mutant
8. Domains for 1m9e:
  1. Domain d1m9ec_: 1m9e C: [84896]
    Other proteins in same PDB: d1m9ea_, d1m9eb_
  2. Domain d1m9ed_: 1m9e D: [84897]
    Other proteins in same PDB: d1m9ea_, d1m9eb_
    mutant
9. Domains for 1m9f:
  1. Domain d1m9fc_: 1m9f C: [84900]
    Other proteins in same PDB: d1m9fa_, d1m9fb_
  2. Domain d1m9fd_: 1m9f D: [84901]
    Other proteins in same PDB: d1m9fa_, d1m9fb_
    mutant
10. Domains for 1m9x:
  1. Domain d1m9xc_: 1m9x C: [84907]
    Other proteins in same PDB: d1m9xa_, d1m9xb_, d1m9xe_, d1m9xf_
  2. Domain d1m9xd_: 1m9x D: [84908]
    Other proteins in same PDB: d1m9xa_, d1m9xb_, d1m9xe_, d1m9xf_
  3. Domain d1m9xg_: 1m9x G: [84911]
    Other proteins in same PDB: d1m9xa_, d1m9xb_, d1m9xe_, d1m9xf_
  4. Domain d1m9xh_: 1m9x H: [84912]
    Other proteins in same PDB: d1m9xa_, d1m9xb_, d1m9xe_, d1m9xf_
    mutant
11. Domains for 1m9y:
  1. Domain d1m9yc_: 1m9y C: [84915]
    Other proteins in same PDB: d1m9ya_, d1m9yb_, d1m9ye_, d1m9yf_
  2. Domain d1m9yd_: 1m9y D: [84916]
    Other proteins in same PDB: d1m9ya_, d1m9yb_, d1m9ye_, d1m9yf_
  3. Domain d1m9yg_: 1m9y G: [84919]
    Other proteins in same PDB: d1m9ya_, d1m9yb_, d1m9ye_, d1m9yf_
  4. Domain d1m9yh_: 1m9y H: [84920]
    Other proteins in same PDB: d1m9ya_, d1m9yb_, d1m9ye_, d1m9yf_
    mutant

More info for Protein HIV-1 capsid protein from a.73.1.1: Retrovirus capsid protein, N-terminal core domain

Timeline for Protein HIV-1 capsid protein from a.73.1.1: Retrovirus capsid protein, N-terminal core domain:

Protein HIV-1 capsid protein from a.73.1.1: Retrovirus capsid protein, N-terminal core domain first appeared (with stable ids) in SCOP 1.55
Protein HIV-1 capsid protein from a.73.1.1: Retrovirus capsid protein, N-terminal core domain appears in SCOP 1.69
Protein HIV-1 capsid protein from a.73.1.1: Retrovirus capsid protein, N-terminal core domain appears in SCOP 1.73
Protein HIV-1 capsid protein from a.73.1.1: Retrovirus capsid protein, N-terminal core domain appears in the current release, SCOPe 2.08