Lineage for Species: Human immunodeficiency virus type 1 [TaxId: 11676]

  1. Root: SCOPe 2.08
  2. 2685877Class a: All alpha proteins [46456] (290 folds)
  3. 2716789Fold a.61: Retroviral matrix proteins [47835] (1 superfamily)
    4-5 helices; right-handed superhelix
  4. 2716790Superfamily a.61.1: Retroviral matrix proteins [47836] (6 families) (S)
    the 5th, C-terminal helix is missing in some of the member structures
  5. 2716791Family a.61.1.1: Immunodeficiency virus matrix proteins [47837] (3 proteins)
    automatically mapped to Pfam PF00540
  6. 2716792Protein HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA) [47838] (1 species)
    topologically similar to one subunit in the interferon-gamma intertwined dimer
  7. 2716793Species Human immunodeficiency virus type 1 [TaxId:11676] [47839] (14 PDB entries)

PDB entries in Species: Human immunodeficiency virus type 1 [TaxId: 11676]:

  1. Domain(s) for 1hiw:
    1. 2716807Domain d1hiwa_: 1hiw A: [18122]
      complexed with so4
    2. 2716808Domain d1hiwb_: 1hiw B: [18123]
      complexed with so4
    3. 2716809Domain d1hiwc_: 1hiw C: [18124]
      complexed with so4
    4. 2716810Domain d1hiwq_: 1hiw Q: [18125]
      complexed with so4
    5. 2716811Domain d1hiwr_: 1hiw R: [18126]
      complexed with so4
    6. 2716812Domain d1hiws_: 1hiw S: [18127]
      complexed with so4
  2. Domain(s) for 1l6n:
  3. Domain(s) for 1tam:
  4. Domain(s) for 1uph:
  5. Domain(s) for 2gol:
  6. Domain(s) for 2h3q:
  7. Domain(s) for 2h3z:
  8. Domain(s) for 2hmx:
  9. Domain(s) for 2jmg:
  10. Domain(s) for 2nv3:
  11. Domain(s) for 7e1j:
    1. 3085103Domain d7e1ja_: 7e1j A: [421420]
      Other proteins in same PDB: d7e1jb2, d7e1jc2, d7e1jd2
      automated match to d1tama_
      complexed with ihp
    2. 3085113Domain d7e1jd1: 7e1j D:0-108 [421430]
      Other proteins in same PDB: d7e1jb2, d7e1jc2, d7e1jd2
      automated match to d1tama_
      complexed with ihp
    3. 3085132Domain d7e1jf_: 7e1j F: [421449]
      Other proteins in same PDB: d7e1jb2, d7e1jc2, d7e1jd2
      automated match to d1tama_
      complexed with ihp
    4. 3085148Domain d7e1jb1: 7e1j B:0-107 [421465]
      Other proteins in same PDB: d7e1jb2, d7e1jc2, d7e1jd2
      automated match to d1tama_
      complexed with ihp
    5. 3085160Domain d7e1je_: 7e1j E: [421477]
      Other proteins in same PDB: d7e1jb2, d7e1jc2, d7e1jd2
      automated match to d1tama_
      complexed with ihp
    6. 3085168Domain d7e1jc1: 7e1j C:0-109 [421485]
      Other proteins in same PDB: d7e1jb2, d7e1jc2, d7e1jd2
      automated match to d1tama_
      complexed with ihp
  12. Domain(s) for 7e1k:
    1. 3085116Domain d7e1ka_: 7e1k A: [421433]
      automated match to d2hmxa_
      complexed with ihp
    2. 3085143Domain d7e1kb_: 7e1k B: [421460]
      automated match to d2hmxa_
      complexed with ihp
  13. Domain(s) for 7jxr:
    1. 2716794Domain d7jxra_: 7jxr A: [403316]
      automated match to d1upha_
      complexed with p6g, so4; mutant
    2. 2716795Domain d7jxrb_: 7jxr B: [403325]
      automated match to d1upha_
      complexed with p6g, so4; mutant
    3. 2716796Domain d7jxrc_: 7jxr C: [403327]
      automated match to d1upha_
      complexed with p6g, so4; mutant
    4. 2716797Domain d7jxrd_: 7jxr D: [403318]
      automated match to d1upha_
      complexed with p6g, so4; mutant
    5. 2716798Domain d7jxre_: 7jxr E: [403317]
      automated match to d1upha_
      complexed with p6g, so4; mutant
    6. 2716799Domain d7jxrf_: 7jxr F: [403311]
      automated match to d1upha_
      complexed with p6g, so4; mutant
  14. Domain(s) for 7jxs:
    1. 2716801Domain d7jxsa_: 7jxs A: [403334]
      automated match to d1upha_
      complexed with 12p, act, p6g, so4; mutant
    2. 2716802Domain d7jxsb_: 7jxs B: [403328]
      automated match to d1upha_
      complexed with 12p, act, p6g, so4; mutant
    3. 2716803Domain d7jxsc_: 7jxs C: [403329]
      automated match to d1upha_
      complexed with 12p, act, p6g, so4; mutant
    4. 2716804Domain d7jxsd_: 7jxs D: [403330]
      automated match to d1upha_
      complexed with 12p, act, p6g, so4; mutant
    5. 2716805Domain d7jxse_: 7jxs E: [403347]
      automated match to d1upha_
      complexed with 12p, act, p6g, so4; mutant
    6. 2716806Domain d7jxsf_: 7jxs F: [403335]
      automated match to d1upha_
      complexed with 12p, act, p6g, so4; mutant

More info for Species Human immunodeficiency virus type 1 [TaxId:11676] from a.61.1.1 HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA)

Timeline for Species Human immunodeficiency virus type 1 [TaxId:11676] from a.61.1.1 HIV-1 matrix protein (HIV-1 MA, HIVp17, p17, MA):