SCOPe 2.07: Species: Bacteriophage P1 [TaxId: 10678]

Lineage for Species: Bacteriophage P1 [TaxId: 10678]

Root: SCOPe 2.07
Class a: All alpha proteins [46456] (289 folds)
Fold a.60: SAM domain-like [47768] (16 superfamilies)
4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
Superfamily a.60.9: lambda integrase-like, N-terminal domain [47823] (2 families)
Family a.60.9.1: lambda integrase-like, N-terminal domain [47824] (3 proteins)
Protein Cre recombinase [47825] (1 species)
Species Bacteriophage P1 [TaxId:10678] [47826] (20 PDB entries)
Uniprot P06956 20-341

PDB entries in Species: Bacteriophage P1 [TaxId: 10678]:

Domain(s) for 1crx:
1. Domain d1crxa1: 1crx A:20-129 [18097]
  Other proteins in same PDB: d1crxa2, d1crxb2
  protein/DNA complex; complexed with po4
2. Domain d1crxb1: 1crx B:20-129 [18098]
  Other proteins in same PDB: d1crxa2, d1crxb2
  protein/DNA complex; complexed with po4
Domain(s) for 1drg:
- Domain d1drga1: 1drg A:21-129 [64792]
  Other proteins in same PDB: d1drga2
  protein/DNA complex
Domain(s) for 1f44:
- Domain d1f44a1: 1f44 A:20-129 [64982]
  Other proteins in same PDB: d1f44a2
  protein/DNA complex
Domain(s) for 1kbu:
1. Domain d1kbua1: 1kbu A:18-129 [72284]
  Other proteins in same PDB: d1kbua2, d1kbub2
  protein/DNA complex
2. Domain d1kbub1: 1kbu B:19-129 [72286]
  Other proteins in same PDB: d1kbua2, d1kbub2
  protein/DNA complex
Domain(s) for 1ma7:
1. Domain d1ma7a1: 1ma7 A:19-129 [84921]
  Other proteins in same PDB: d1ma7a2, d1ma7b2
  protein/DNA complex; mutant
2. Domain d1ma7b1: 1ma7 B:20-129 [84923]
  Other proteins in same PDB: d1ma7a2, d1ma7b2
  protein/DNA complex; mutant
Domain(s) for 1nzb:
1. Domain d1nzba1: 1nzb A:10-129 [92365]
  Other proteins in same PDB: d1nzba2, d1nzbb2, d1nzbe2, d1nzbf2
  protein/DNA complex; complexed with iod, mg
2. Domain d1nzbb1: 1nzb B:20-129 [92367]
  Other proteins in same PDB: d1nzba2, d1nzbb2, d1nzbe2, d1nzbf2
  protein/DNA complex; complexed with iod, mg
3. Domain d1nzbe1: 1nzb E:21-129 [92369]
  Other proteins in same PDB: d1nzba2, d1nzbb2, d1nzbe2, d1nzbf2
  protein/DNA complex; complexed with iod, mg
4. Domain d1nzbf1: 1nzb F:20-129 [92371]
  Other proteins in same PDB: d1nzba2, d1nzbb2, d1nzbe2, d1nzbf2
  protein/DNA complex; complexed with iod, mg
Domain(s) for 1ouq:
1. Domain d1ouqa1: 1ouq A:10-129 [93557]
  Other proteins in same PDB: d1ouqa2, d1ouqb2, d1ouqe2, d1ouqf2
  protein/DNA complex; complexed with iod, mg
2. Domain d1ouqb1: 1ouq B:20-129 [93559]
  Other proteins in same PDB: d1ouqa2, d1ouqb2, d1ouqe2, d1ouqf2
  protein/DNA complex; complexed with iod, mg
3. Domain d1ouqe1: 1ouq E:21-129 [93561]
  Other proteins in same PDB: d1ouqa2, d1ouqb2, d1ouqe2, d1ouqf2
  protein/DNA complex; complexed with iod, mg
4. Domain d1ouqf1: 1ouq F:20-129 [93563]
  Other proteins in same PDB: d1ouqa2, d1ouqb2, d1ouqe2, d1ouqf2
  protein/DNA complex; complexed with iod, mg
Domain(s) for 1pvp:
1. Domain d1pvpa1: 1pvp A:19-129 [95177]
  Other proteins in same PDB: d1pvpa2, d1pvpb2
  protein/DNA complex
2. Domain d1pvpb1: 1pvp B:19-129 [95179]
  Other proteins in same PDB: d1pvpa2, d1pvpb2
  protein/DNA complex
Domain(s) for 1pvq:
1. Domain d1pvqa1: 1pvq A:19-129 [95181]
  Other proteins in same PDB: d1pvqa2, d1pvqb2
  protein/DNA complex
2. Domain d1pvqb1: 1pvq B:19-129 [95183]
  Other proteins in same PDB: d1pvqa2, d1pvqb2
  protein/DNA complex
Domain(s) for 1pvr:
1. Domain d1pvra1: 1pvr A:18-129 [95185]
  Other proteins in same PDB: d1pvra2, d1pvrb2
  protein/DNA complex
2. Domain d1pvrb1: 1pvr B:19-129 [95187]
  Other proteins in same PDB: d1pvra2, d1pvrb2
  protein/DNA complex
Domain(s) for 1q3u:
1. Domain d1q3ua1: 1q3u A:10-129 [95752]
  Other proteins in same PDB: d1q3ua2, d1q3ub2, d1q3ue2, d1q3uf2
  protein/DNA complex; complexed with iod, mg
2. Domain d1q3ub1: 1q3u B:20-129 [95754]
  Other proteins in same PDB: d1q3ua2, d1q3ub2, d1q3ue2, d1q3uf2
  protein/DNA complex; complexed with iod, mg
3. Domain d1q3ue1: 1q3u E:21-129 [95756]
  Other proteins in same PDB: d1q3ua2, d1q3ub2, d1q3ue2, d1q3uf2
  protein/DNA complex; complexed with iod, mg
4. Domain d1q3uf1: 1q3u F:20-129 [95758]
  Other proteins in same PDB: d1q3ua2, d1q3ub2, d1q3ue2, d1q3uf2
  protein/DNA complex; complexed with iod, mg
Domain(s) for 1q3v:
1. Domain d1q3va1: 1q3v A:10-129 [95760]
  Other proteins in same PDB: d1q3va2, d1q3vb2, d1q3ve2, d1q3vf2
  protein/DNA complex; complexed with iod, mg
2. Domain d1q3vb1: 1q3v B:20-129 [95762]
  Other proteins in same PDB: d1q3va2, d1q3vb2, d1q3ve2, d1q3vf2
  protein/DNA complex; complexed with iod, mg
3. Domain d1q3ve1: 1q3v E:21-129 [95764]
  Other proteins in same PDB: d1q3va2, d1q3vb2, d1q3ve2, d1q3vf2
  protein/DNA complex; complexed with iod, mg
4. Domain d1q3vf1: 1q3v F:20-129 [95766]
  Other proteins in same PDB: d1q3va2, d1q3vb2, d1q3ve2, d1q3vf2
  protein/DNA complex; complexed with iod, mg
Domain(s) for 1xns:
1. Domain d1xnsa1: 1xns A:20-129 [115647]
  Other proteins in same PDB: d1xnsa2, d1xnsb2
  protein/DNA complex
2. Domain d1xnsb1: 1xns B:20-129 [115649]
  Other proteins in same PDB: d1xnsa2, d1xnsb2
  protein/DNA complex
Domain(s) for 1xo0:
1. Domain d1xo0a1: 1xo0 A:20-129 [115674]
  Other proteins in same PDB: d1xo0a2, d1xo0b2
  protein/DNA complex
2. Domain d1xo0b1: 1xo0 B:20-129 [115676]
  Other proteins in same PDB: d1xo0a2, d1xo0b2
  protein/DNA complex
Domain(s) for 2crx:
1. Domain d2crxa1: 2crx A:19-129 [18099]
  Other proteins in same PDB: d2crxa2, d2crxb2
  protein/DNA complex
2. Domain d2crxb1: 2crx B:19-129 [18100]
  Other proteins in same PDB: d2crxa2, d2crxb2
  protein/DNA complex
Domain(s) for 2hof:
1. Domain d2hofa1: 2hof A:20-129 [147313]
  Other proteins in same PDB: d2hofa2, d2hofb2
  automated match to d1drga1
  protein/DNA complex
2. Domain d2hofb1: 2hof B:20-129 [147315]
  Other proteins in same PDB: d2hofa2, d2hofb2
  automated match to d1drga1
  protein/DNA complex
Domain(s) for 3crx:
1. Domain d3crxa1: 3crx A:19-129 [18101]
  Other proteins in same PDB: d3crxa2, d3crxb2
  protein/DNA complex
2. Domain d3crxb1: 3crx B:19-129 [18102]
  Other proteins in same PDB: d3crxa2, d3crxb2
  protein/DNA complex
Domain(s) for 3mgv:
1. Domain d3mgva1: 3mgv A:20-129 [213253]
  Other proteins in same PDB: d3mgva2, d3mgvb2, d3mgvc2, d3mgvd2
  automated match to d2crxa1
  protein/DNA complex; complexed with vo4
2. Domain d3mgvb1: 3mgv B:20-129 [213255]
  Other proteins in same PDB: d3mgva2, d3mgvb2, d3mgvc2, d3mgvd2
  automated match to d2crxa1
  protein/DNA complex; complexed with vo4
3. Domain d3mgvc1: 3mgv C:20-129 [213257]
  Other proteins in same PDB: d3mgva2, d3mgvb2, d3mgvc2, d3mgvd2
  automated match to d2crxa1
  protein/DNA complex; complexed with vo4
4. Domain d3mgvd1: 3mgv D:20-129 [213259]
  Other proteins in same PDB: d3mgva2, d3mgvb2, d3mgvc2, d3mgvd2
  automated match to d2crxa1
  protein/DNA complex; complexed with vo4
Domain(s) for 4crx:
1. Domain d4crxa1: 4crx A:20-129 [18095]
  Other proteins in same PDB: d4crxa2, d4crxb2
  protein/DNA complex
2. Domain d4crxb1: 4crx B:20-129 [18096]
  Other proteins in same PDB: d4crxa2, d4crxb2
  protein/DNA complex
Domain(s) for 5crx:
1. Domain d5crxa1: 5crx A:19-129 [18103]
  Other proteins in same PDB: d5crxa2, d5crxb2
2. Domain d5crxb1: 5crx B:19-129 [18104]
  Other proteins in same PDB: d5crxa2, d5crxb2

More info for Species Bacteriophage P1 [TaxId:10678] from a.60.9.1 Cre recombinase

Timeline for Species Bacteriophage P1 [TaxId:10678] from a.60.9.1 Cre recombinase:

Species Bacteriophage P1 [TaxId:10678] from a.60.9.1 Cre recombinase first appeared (with stable ids) in SCOP 1.55
Species Bacteriophage P1 [TaxId:10678] from a.60.9.1 Cre recombinase appears in SCOPe 2.06
Species Bacteriophage P1 [TaxId:10678] from a.60.9.1 Cre recombinase appears in the current release, SCOPe 2.08