SCOPe 2.05: Protein: Cre recombinase

Lineage for Protein: Cre recombinase

Root: SCOPe 2.05
Class a: All alpha proteins [46456] (286 folds)
Fold a.60: SAM domain-like [47768] (16 superfamilies)
4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
Superfamily a.60.9: lambda integrase-like, N-terminal domain [47823] (2 families)
Family a.60.9.1: lambda integrase-like, N-terminal domain [47824] (3 proteins)
Protein Cre recombinase [47825] (1 species)

Species:

Bacteriophage P1 [TaxId:10678] [47826] (20 PDB entries)
Uniprot P06956 20-341
1. Domains for 1crx:
  1. Domain d1crxa1: 1crx A:20-129 [18097]
    Other proteins in same PDB: d1crxa2, d1crxb2
    protein/DNA complex; complexed with po4
  2. Domain d1crxb1: 1crx B:20-129 [18098]
    Other proteins in same PDB: d1crxa2, d1crxb2
    protein/DNA complex; complexed with po4
2. Domain for 1drg:
  - Domain d1drga1: 1drg A:21-129 [64792]
    Other proteins in same PDB: d1drga2
    protein/DNA complex
3. Domain for 1f44:
  - Domain d1f44a1: 1f44 A:20-129 [64982]
    Other proteins in same PDB: d1f44a2
    protein/DNA complex
4. Domains for 1kbu:
  1. Domain d1kbua1: 1kbu A:18-129 [72284]
    Other proteins in same PDB: d1kbua2, d1kbub2
    protein/DNA complex
  2. Domain d1kbub1: 1kbu B:19-129 [72286]
    Other proteins in same PDB: d1kbua2, d1kbub2
    protein/DNA complex
5. Domains for 1ma7:
  1. Domain d1ma7a1: 1ma7 A:19-129 [84921]
    Other proteins in same PDB: d1ma7a2, d1ma7b2
    protein/DNA complex; mutant
  2. Domain d1ma7b1: 1ma7 B:20-129 [84923]
    Other proteins in same PDB: d1ma7a2, d1ma7b2
    protein/DNA complex; mutant
6. Domains for 1nzb:
  1. Domain d1nzba1: 1nzb A:10-129 [92365]
    Other proteins in same PDB: d1nzba2, d1nzbb2, d1nzbe2, d1nzbf2
    protein/DNA complex; complexed with iod, mg
  2. Domain d1nzbb1: 1nzb B:20-129 [92367]
    Other proteins in same PDB: d1nzba2, d1nzbb2, d1nzbe2, d1nzbf2
    protein/DNA complex; complexed with iod, mg
  3. Domain d1nzbe1: 1nzb E:21-129 [92369]
    Other proteins in same PDB: d1nzba2, d1nzbb2, d1nzbe2, d1nzbf2
    protein/DNA complex; complexed with iod, mg
  4. Domain d1nzbf1: 1nzb F:20-129 [92371]
    Other proteins in same PDB: d1nzba2, d1nzbb2, d1nzbe2, d1nzbf2
    protein/DNA complex; complexed with iod, mg
7. Domains for 1ouq:
  1. Domain d1ouqa1: 1ouq A:10-129 [93557]
    Other proteins in same PDB: d1ouqa2, d1ouqb2, d1ouqe2, d1ouqf2
    protein/DNA complex; complexed with iod, mg
  2. Domain d1ouqb1: 1ouq B:20-129 [93559]
    Other proteins in same PDB: d1ouqa2, d1ouqb2, d1ouqe2, d1ouqf2
    protein/DNA complex; complexed with iod, mg
  3. Domain d1ouqe1: 1ouq E:21-129 [93561]
    Other proteins in same PDB: d1ouqa2, d1ouqb2, d1ouqe2, d1ouqf2
    protein/DNA complex; complexed with iod, mg
  4. Domain d1ouqf1: 1ouq F:20-129 [93563]
    Other proteins in same PDB: d1ouqa2, d1ouqb2, d1ouqe2, d1ouqf2
    protein/DNA complex; complexed with iod, mg
8. Domains for 1pvp:
  1. Domain d1pvpa1: 1pvp A:19-129 [95177]
    Other proteins in same PDB: d1pvpa2, d1pvpb2
    protein/DNA complex
  2. Domain d1pvpb1: 1pvp B:19-129 [95179]
    Other proteins in same PDB: d1pvpa2, d1pvpb2
    protein/DNA complex
9. Domains for 1pvq:
  1. Domain d1pvqa1: 1pvq A:19-129 [95181]
    Other proteins in same PDB: d1pvqa2, d1pvqb2
    protein/DNA complex
  2. Domain d1pvqb1: 1pvq B:19-129 [95183]
    Other proteins in same PDB: d1pvqa2, d1pvqb2
    protein/DNA complex
10. Domains for 1pvr:
  1. Domain d1pvra1: 1pvr A:18-129 [95185]
    Other proteins in same PDB: d1pvra2, d1pvrb2
    protein/DNA complex
  2. Domain d1pvrb1: 1pvr B:19-129 [95187]
    Other proteins in same PDB: d1pvra2, d1pvrb2
    protein/DNA complex
11. Domains for 1q3u:
  1. Domain d1q3ua1: 1q3u A:10-129 [95752]
    Other proteins in same PDB: d1q3ua2, d1q3ub2, d1q3ue2, d1q3uf2
    protein/DNA complex; complexed with iod, mg
  2. Domain d1q3ub1: 1q3u B:20-129 [95754]
    Other proteins in same PDB: d1q3ua2, d1q3ub2, d1q3ue2, d1q3uf2
    protein/DNA complex; complexed with iod, mg
  3. Domain d1q3ue1: 1q3u E:21-129 [95756]
    Other proteins in same PDB: d1q3ua2, d1q3ub2, d1q3ue2, d1q3uf2
    protein/DNA complex; complexed with iod, mg
  4. Domain d1q3uf1: 1q3u F:20-129 [95758]
    Other proteins in same PDB: d1q3ua2, d1q3ub2, d1q3ue2, d1q3uf2
    protein/DNA complex; complexed with iod, mg
12. Domains for 1q3v:
  1. Domain d1q3va1: 1q3v A:10-129 [95760]
    Other proteins in same PDB: d1q3va2, d1q3vb2, d1q3ve2, d1q3vf2
    protein/DNA complex; complexed with iod, mg
  2. Domain d1q3vb1: 1q3v B:20-129 [95762]
    Other proteins in same PDB: d1q3va2, d1q3vb2, d1q3ve2, d1q3vf2
    protein/DNA complex; complexed with iod, mg
  3. Domain d1q3ve1: 1q3v E:21-129 [95764]
    Other proteins in same PDB: d1q3va2, d1q3vb2, d1q3ve2, d1q3vf2
    protein/DNA complex; complexed with iod, mg
  4. Domain d1q3vf1: 1q3v F:20-129 [95766]
    Other proteins in same PDB: d1q3va2, d1q3vb2, d1q3ve2, d1q3vf2
    protein/DNA complex; complexed with iod, mg
13. Domains for 1xns:
  1. Domain d1xnsa1: 1xns A:20-129 [115647]
    Other proteins in same PDB: d1xnsa2, d1xnsb2
    protein/DNA complex
  2. Domain d1xnsb1: 1xns B:20-129 [115649]
    Other proteins in same PDB: d1xnsa2, d1xnsb2
    protein/DNA complex
14. Domains for 1xo0:
  1. Domain d1xo0a1: 1xo0 A:20-129 [115674]
    Other proteins in same PDB: d1xo0a2, d1xo0b2
    protein/DNA complex
  2. Domain d1xo0b1: 1xo0 B:20-129 [115676]
    Other proteins in same PDB: d1xo0a2, d1xo0b2
    protein/DNA complex
15. Domains for 2crx:
  1. Domain d2crxa1: 2crx A:19-129 [18099]
    Other proteins in same PDB: d2crxa2, d2crxb2
    protein/DNA complex
  2. Domain d2crxb1: 2crx B:19-129 [18100]
    Other proteins in same PDB: d2crxa2, d2crxb2
    protein/DNA complex
16. Domains for 2hof:
  1. Domain d2hofa1: 2hof A:20-129 [147313]
    Other proteins in same PDB: d2hofa2, d2hofb2
    automated match to d1drga1
    protein/DNA complex
  2. Domain d2hofb1: 2hof B:20-129 [147315]
    Other proteins in same PDB: d2hofa2, d2hofb2
    automated match to d1drga1
    protein/DNA complex
17. Domains for 3crx:
  1. Domain d3crxa1: 3crx A:19-129 [18101]
    Other proteins in same PDB: d3crxa2, d3crxb2
    protein/DNA complex
  2. Domain d3crxb1: 3crx B:19-129 [18102]
    Other proteins in same PDB: d3crxa2, d3crxb2
    protein/DNA complex
18. Domains for 3mgv:
  1. Domain d3mgva1: 3mgv A:20-129 [213253]
    Other proteins in same PDB: d3mgva2, d3mgvb2, d3mgvc2, d3mgvd2
    automated match to d2crxa1
    protein/DNA complex; complexed with vo4
  2. Domain d3mgvb1: 3mgv B:20-129 [213255]
    Other proteins in same PDB: d3mgva2, d3mgvb2, d3mgvc2, d3mgvd2
    automated match to d2crxa1
    protein/DNA complex; complexed with vo4
  3. Domain d3mgvc1: 3mgv C:20-129 [213257]
    Other proteins in same PDB: d3mgva2, d3mgvb2, d3mgvc2, d3mgvd2
    automated match to d2crxa1
    protein/DNA complex; complexed with vo4
  4. Domain d3mgvd1: 3mgv D:20-129 [213259]
    Other proteins in same PDB: d3mgva2, d3mgvb2, d3mgvc2, d3mgvd2
    automated match to d2crxa1
    protein/DNA complex; complexed with vo4
19. Domains for 4crx:
  1. Domain d4crxa1: 4crx A:20-129 [18095]
    Other proteins in same PDB: d4crxa2, d4crxb2
    protein/DNA complex
  2. Domain d4crxb1: 4crx B:20-129 [18096]
    Other proteins in same PDB: d4crxa2, d4crxb2
    protein/DNA complex
20. Domains for 5crx:
  1. Domain d5crxa1: 5crx A:19-129 [18103]
    Other proteins in same PDB: d5crxa2, d5crxb2
  2. Domain d5crxb1: 5crx B:19-129 [18104]
    Other proteins in same PDB: d5crxa2, d5crxb2

More info for Protein Cre recombinase from a.60.9.1: lambda integrase-like, N-terminal domain

Timeline for Protein Cre recombinase from a.60.9.1: lambda integrase-like, N-terminal domain:

Protein Cre recombinase from a.60.9.1: lambda integrase-like, N-terminal domain first appeared (with stable ids) in SCOP 1.55
Protein Cre recombinase from a.60.9.1: lambda integrase-like, N-terminal domain appears in SCOPe 2.04
Protein Cre recombinase from a.60.9.1: lambda integrase-like, N-terminal domain appears in SCOPe 2.06
Protein Cre recombinase from a.60.9.1: lambda integrase-like, N-terminal domain appears in the current release, SCOPe 2.08