SCOPe 2.08: Protein: T5 5'-exonuclease

Lineage for Protein: T5 5'-exonuclease

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.60: SAM domain-like [47768] (17 superfamilies)
4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
Superfamily a.60.7: 5' to 3' exonuclease, C-terminal subdomain [47807] (2 families)
Family a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain [47808] (4 proteins)
Protein T5 5'-exonuclease [47813] (1 species)

Species:

Bacteriophage T5 [TaxId:10726] [47814] (6 PDB entries)
1. Domains for 1exn:
  1. Domain d1exna1: 1exn A:186-290 [18088]
    Other proteins in same PDB: d1exna2, d1exnb2
  2. Domain d1exnb1: 1exn B:186-291 [18089]
    Other proteins in same PDB: d1exna2, d1exnb2
2. Domains for 1ut5:
  1. Domain d1ut5a1: 1ut5 A:186-291 [99902]
    Other proteins in same PDB: d1ut5a2, d1ut5b2
    complexed with mn
  2. Domain d1ut5b1: 1ut5 B:186-291 [99904]
    Other proteins in same PDB: d1ut5a2, d1ut5b2
    complexed with mn
3. Domains for 1ut8:
  1. Domain d1ut8a1: 1ut8 A:186-291 [99908]
    Other proteins in same PDB: d1ut8a2, d1ut8b2
    complexed with zn
  2. Domain d1ut8b1: 1ut8 B:186-291 [99910]
    Other proteins in same PDB: d1ut8a2, d1ut8b2
    complexed with zn
4. Domains for 1xo1:
  1. Domain d1xo1a1: 1xo1 A:186-290 [18086]
    Other proteins in same PDB: d1xo1a2, d1xo1b2
    mutant
  2. Domain d1xo1b1: 1xo1 B:186-290 [18087]
    Other proteins in same PDB: d1xo1a2, d1xo1b2
    mutant
5. Domains for 5hml:
  1. Domain d5hmla2: 5hml A:186-290 [317968]
    Other proteins in same PDB: d5hmla1, d5hmlb1
    automated match to d1xo1a1
    complexed with b3p, cl, edo, iod, mg
  2. Domain d5hmlb2: 5hml B:186-290 [318028]
    Other proteins in same PDB: d5hmla1, d5hmlb1
    automated match to d1xo1a1
    complexed with b3p, cl, edo, iod, mg
6. Domains for 5hmm:
  1. Domain d5hmma2: 5hmm A:186-290 [318001]
    Other proteins in same PDB: d5hmma1, d5hmmb1
    automated match to d1xo1a1
    complexed with cl, edo, mg
  2. Domain d5hmmb2: 5hmm B:186-290 [317978]
    Other proteins in same PDB: d5hmma1, d5hmmb1
    automated match to d1xo1a1
    complexed with cl, edo, mg

More info for Protein T5 5'-exonuclease from a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain

Timeline for Protein T5 5'-exonuclease from a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain:

Protein T5 5'-exonuclease from a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain first appeared (with stable ids) in SCOP 1.55
Protein T5 5'-exonuclease from a.60.7.1: 5' to 3' exonuclease, C-terminal subdomain appears in SCOPe 2.07