SCOPe 2.08: Protein: Barrier-to-autointegration factor, BAF

Lineage for Protein: Barrier-to-autointegration factor, BAF

Root: SCOPe 2.08
Class a: All alpha proteins [46456] (290 folds)
Fold a.60: SAM domain-like [47768] (17 superfamilies)
4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
Superfamily a.60.5: Barrier-to-autointegration factor, BAF [47798] (1 family)
contains one classic and one pseudo HhH motifs
automatically mapped to Pfam PF02961
Family a.60.5.1: Barrier-to-autointegration factor, BAF [47799] (2 proteins)
Protein Barrier-to-autointegration factor, BAF [47800] (1 species)

Species:

Human (Homo sapiens) [TaxId:9606] [47801] (24 PDB entries)
1. Domains for 1ci4:
  1. Domain d1ci4a_: 1ci4 A: [17970]
    protein/DNA complex
  2. Domain d1ci4b_: 1ci4 B: [17971]
    protein/DNA complex
2. Domains for 1qck:
  1. Domain d1qcka_: 1qck A: [17976]
  2. Domain d1qckb_: 1qck B: [17977]
3. Domain for 2bzf:
  - Domain d2bzfa_: 2bzf A: [129558]
    automated match to d1ci4a_
4. Domains for 2ezx:
  1. Domain d2ezxa_: 2ezx A: [17978]
  2. Domain d2ezxb_: 2ezx B: [17979]
5. Domains for 2ezy:
  1. Domain d2ezya_: 2ezy A: [17972]
  2. Domain d2ezyb_: 2ezy B: [17973]
6. Domains for 2ezz:
  1. Domain d2ezza_: 2ezz A: [17974]
  2. Domain d2ezzb_: 2ezz B: [17975]
7. Domains for 2odg:
  1. Domain d2odga_: 2odg A: [139027]
    Other proteins in same PDB: d2odgc2, d2odgc3
    automated match to d1ci4a_
  2. Domain d2odgb_: 2odg B: [139028]
    Other proteins in same PDB: d2odgc2, d2odgc3
    automated match to d1ci4a_
8. Domains for 6ghd:
  1. Domain d6ghda_: 6ghd A: [355777]
    Other proteins in same PDB: d6ghdb_, d6ghdf_, d6ghdg1, d6ghdg2, d6ghdh_
    automated match to d1ci4a_
    complexed with edo, so4
  2. Domain d6ghdc_: 6ghd C: [355775]
    Other proteins in same PDB: d6ghdb_, d6ghdf_, d6ghdg1, d6ghdg2, d6ghdh_
    automated match to d1ci4a_
    complexed with edo, so4
  3. Domain d6ghdd_: 6ghd D: [355763]
    Other proteins in same PDB: d6ghdb_, d6ghdf_, d6ghdg1, d6ghdg2, d6ghdh_
    automated match to d1ci4a_
    complexed with edo, so4
  4. Domain d6ghde_: 6ghd E: [355740]
    Other proteins in same PDB: d6ghdb_, d6ghdf_, d6ghdg1, d6ghdg2, d6ghdh_
    automated match to d1ci4a_
    complexed with edo, so4
9. Domains for 6unt:
  1. Domain d6unta_: 6unt A: [392360]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6untb_: 6unt B: [392355]
    automated match to d1ci4a_
    complexed with eoh
10. Domains for 6ure:
  1. Domain d6urea_: 6ure A: [392493]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6ureb_: 6ure B: [392531]
    automated match to d1ci4a_
    complexed with eoh
11. Domains for 6urj:
  1. Domain d6urja_: 6urj A: [392362]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6urjb_: 6urj B: [392388]
    automated match to d1ci4a_
    complexed with eoh
12. Domains for 6urk:
  1. Domain d6urka_: 6urk A: [392379]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6urkb_: 6urk B: [392485]
    automated match to d1ci4a_
    complexed with eoh
13. Domains for 6url:
  1. Domain d6urla_: 6url A: [392416]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6urlb_: 6url B: [392426]
    automated match to d1ci4a_
    complexed with eoh
14. Domains for 6urn:
  1. Domain d6urna_: 6urn A: [392460]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6urnb_: 6urn B: [392439]
    automated match to d1ci4a_
    complexed with eoh
15. Domains for 6urr:
  1. Domain d6urra_: 6urr A: [392374]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6urrb_: 6urr B: [392404]
    automated match to d1ci4a_
    complexed with eoh
16. Domains for 6urz:
  1. Domain d6urza_: 6urz A: [392450]
    automated match to d1ci4a_
    complexed with eoh, moh
  2. Domain d6urzb_: 6urz B: [392445]
    automated match to d1ci4a_
    complexed with eoh, moh
17. Domains for 6us0:
  1. Domain d6us0a_: 6us0 A: [392370]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6us0b_: 6us0 B: [392385]
    automated match to d1ci4a_
    complexed with eoh
18. Domains for 6us1:
  1. Domain d6us1a_: 6us1 A: [392489]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6us1b_: 6us1 B: [392488]
    automated match to d1ci4a_
    complexed with eoh
19. Domains for 6us7:
  1. Domain d6us7a_: 6us7 A: [392530]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6us7b_: 6us7 B: [392403]
    automated match to d1ci4a_
    complexed with eoh
20. Domains for 6usb:
  1. Domain d6usba_: 6usb A: [392424]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6usbb_: 6usb B: [392496]
    automated match to d1ci4a_
    complexed with eoh
21. Domains for 6usd:
  1. Domain d6usda_: 6usd A: [392421]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6usdb_: 6usd B: [392428]
    automated match to d1ci4a_
    complexed with eoh
22. Domains for 6usi:
  1. Domain d6usia_: 6usi A: [392398]
    automated match to d1ci4a_
    complexed with eoh
  2. Domain d6usib_: 6usi B: [392543]
    automated match to d1ci4a_
    complexed with eoh
23. Domain for 7abm:
  - Domain d7abma_: 7abm A: [417539]
    automated match to d7ndya_
    complexed with cs, sep
24. Domains for 7ndy:
  1. Domain d7ndya_: 7ndy A: [402567]
    Other proteins in same PDB: d7ndyg_
    automated match to d1ci4a_
    protein/DNA complex; complexed with epe
  2. Domain d7ndyb_: 7ndy B: [402588]
    Other proteins in same PDB: d7ndyg_
    automated match to d1ci4a_
    protein/DNA complex; complexed with epe

More info for Protein Barrier-to-autointegration factor, BAF from a.60.5.1: Barrier-to-autointegration factor, BAF

Timeline for Protein Barrier-to-autointegration factor, BAF from a.60.5.1: Barrier-to-autointegration factor, BAF:

Protein Barrier-to-autointegration factor, BAF from a.60.5.1: Barrier-to-autointegration factor, BAF first appeared (with stable ids) in SCOP 1.55
Protein Barrier-to-autointegration factor, BAF from a.60.5.1: Barrier-to-autointegration factor, BAF appears in SCOPe 2.07