Lineage for Species: Thermus filiformis [TaxId: 276]

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 1998615Fold a.60: SAM domain-like [47768] (16 superfamilies)
    4-5 helices; bundle of two orthogonally packed alpha-hairpins; involved in the interactions with DNA and proteins
  4. 1998807Superfamily a.60.2: RuvA domain 2-like [47781] (7 families) (S)
    duplication: contains two helix-hairpin-helix (HhH) motifs
  5. 1998832Family a.60.2.2: NAD+-dependent DNA ligase, domain 3 [47786] (1 protein)
  6. 1998833Protein NAD+-dependent DNA ligase, domain 3 [47787] (1 species)
    duplication: consists of two RuvA-like domains (four HhH motifs); also contains a zinc-finger subdomain
  7. 1998834Species Thermus filiformis [TaxId:276] [47788] (3 PDB entries)

PDB entries in Species: Thermus filiformis [TaxId: 276]:

  1. Domain(s) for 1dgs:
    1. 1998835Domain d1dgsa1: 1dgs A:401-581 [17963]
      Other proteins in same PDB: d1dgsa2, d1dgsa3, d1dgsb2, d1dgsb3
      protein/DNA complex; complexed with amp, zn
    2. 1998836Domain d1dgsb1: 1dgs B:2401-2581 [17964]
      Other proteins in same PDB: d1dgsa2, d1dgsa3, d1dgsb2, d1dgsb3
      protein/DNA complex; complexed with amp, zn
  2. Domain(s) for 1dgt:
  3. Domain(s) for 1v9p:
    1. 1998837Domain d1v9pa1: 1v9p A:404-584 [100544]
      Other proteins in same PDB: d1v9pa2, d1v9pa3, d1v9pb2, d1v9pb3
      complexed with amp, zn
    2. 1998838Domain d1v9pb1: 1v9p B:2404-2584 [100547]
      Other proteins in same PDB: d1v9pa2, d1v9pa3, d1v9pb2, d1v9pb3
      complexed with amp, zn

More info for Species Thermus filiformis [TaxId:276] from a.60.2.2 NAD+-dependent DNA ligase, domain 3

Timeline for Species Thermus filiformis [TaxId:276] from a.60.2.2 NAD+-dependent DNA ligase, domain 3: