SCOPe 2.06: Family a.52.1.1: Plant lipid-transfer and hydrophobic proteins

Lineage for Family a.52.1.1: Plant lipid-transfer and hydrophobic proteins

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.52: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin [47698] (1 superfamily)
   4 helices; folded leaf; right-handed superhelix

4. Superfamily a.52.1: Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin [47699] (4 families)
   can be classified as disulfide-rich

5. Family a.52.1.1: Plant lipid-transfer and hydrophobic proteins [47700] (4 proteins)

Proteins:

1. Non-specific lipid-transfer protein homologue (ns-LTP2) [81787] (3 species)
   different pattern for Cys-pairing compared with ns-LTP1

   1. Species English wheat (Triticum turgidum) [TaxId:4571] [89073] (1 PDB entry)

   2. Species Rice (Oryza sativa) [TaxId:4530] [81788] (1 PDB entry)

   3. Species Wheat (Triticum aestivum) [TaxId:4565] [186777] (1 PDB entry)

2. Plant non-specific lipid-transfer protein (ns-LTP, ns-LTP1) [47703] (4 species)

   1. Species Barley (Hordeum vulgare) [TaxId:4513] [47705] (6 PDB entries)

   2. Species Maize (Zea mays) [TaxId:4577] [47706] (11 PDB entries)

   3. Species Rice (Oryza sativa) [TaxId:4530] [47707] (5 PDB entries)
      Uniprot P23096 26-116

   4. Species Wheat (Triticum aestivum), L. seeds [TaxId:4565] [47704] (3 PDB entries)

3. Soybean hydrophobic protein [47701] (1 species)

   • Species Soybean (Glycine max) [TaxId:3847] [47702] (1 PDB entry)

4. automated matches [190480] (3 species)
   not a true protein

   1. Species Corylus avellana [TaxId:13451] [278206] (1 PDB entry)

   2. Species Prunus persica [TaxId:3760] [187408] (2 PDB entries)

   3. Species Tobacco (Nicotiana tabacum) [TaxId:4097] [254901] (1 PDB entry)

More info for Family a.52.1.1: Plant lipid-transfer and hydrophobic proteins

Timeline for Family a.52.1.1: Plant lipid-transfer and hydrophobic proteins:

• Family a.52.1.1: Plant lipid-transfer and hydrophobic proteins first appeared (with stable ids) in SCOP 1.55
  
• Family a.52.1.1: Plant lipid-transfer and hydrophobic proteins appears in SCOPe 2.05
  
• Family a.52.1.1: Plant lipid-transfer and hydrophobic proteins appears in SCOPe 2.07
  
• Family a.52.1.1: Plant lipid-transfer and hydrophobic proteins appears in the current release, SCOPe 2.08