SCOPe 2.07: Family a.39.2.1: Insect pheromone/odorant-binding proteins

Lineage for Family a.39.2.1: Insect pheromone/odorant-binding proteins

1. Root: SCOPe 2.07

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.39: EF Hand-like [47472] (4 superfamilies)
   core: 4 helices; array of 2 hairpins, opened

4. Superfamily a.39.2: Insect pheromone/odorant-binding proteins [47565] (2 families)
   the N-terminal extension, containing a few short helices, forms a flexible lid for the binding cavity

5. Family a.39.2.1: Insect pheromone/odorant-binding proteins [47566] (6 proteins)
   automatically mapped to Pfam PF01395

Proteins:

1. Moth pheromone-binding protein, PBP [47569] (2 species)

   1. Species Polyphemus moth (Antheraea polyphemus) [TaxId:7120] [101187] (3 PDB entries)

   2. Species Silkworm (Bombyx mori) [TaxId:7091] [47570] (4 PDB entries)

2. Odorant binding protein LUSH [101190] (1 species)

   • Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [101191] (12 PDB entries)

3. Pheromone binding protein PBPLma [101188] (1 species)

   • Species Madeira cockroach (Leucophaea maderae) [TaxId:36963] [101189] (3 PDB entries)

4. Pheromone-binding protein asp1 [101192] (1 species)

   • Species Honeybee (Apis mellifera) [TaxId:7460] [101193] (15 PDB entries)

5. Thp12-carrier protein [47567] (1 species)

   • Species Yellow mealworm (Tenebrio molitor) [TaxId:7067] [47568] (2 PDB entries)

6. automated matches [190345] (4 species)
   not a true protein

   1. Species Amyelois transitella [TaxId:680683] [193910] (3 PDB entries)

   2. Species Honeybee (Apis mellifera) [TaxId:7460] [188890] (6 PDB entries)

   3. Species Lymantria dispar [TaxId:13123] [392351] (1 PDB entry)

   4. Species Silkworm (Bombyx mori) [TaxId:7091] [187172] (3 PDB entries)

More info for Family a.39.2.1: Insect pheromone/odorant-binding proteins

Timeline for Family a.39.2.1: Insect pheromone/odorant-binding proteins:

• Family a.39.2.1: Insect pheromone/odorant-binding proteins first appeared (with stable ids) in SCOP 1.55, called Family a.39.2.1: Insect pheromon/odorant-binding proteins
  
• Family a.39.2.1: Insect pheromone/odorant-binding proteins appears in SCOPe 2.06
  
• Family a.39.2.1: Insect pheromone/odorant-binding proteins appears in the current release, SCOPe 2.08