Lineage for Species: African clawed frog (Xenopus laevis) [TaxId: 8355]

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2323235Fold a.39: EF Hand-like [47472] (4 superfamilies)
    core: 4 helices; array of 2 hairpins, opened
  4. 2323236Superfamily a.39.1: EF-hand [47473] (12 families) (S)
    Duplication: consists of two EF-hand units: each is made of two helices connected with calcium-binding loop
  5. 2323718Family a.39.1.5: Calmodulin-like [47502] (24 proteins)
    Duplication: made with two pairs of EF-hands
  6. 2323778Protein Calmodulin [47516] (14 species)
  7. 2323779Species African clawed frog (Xenopus laevis) [TaxId:8355] [47521] (34 PDB entries)

PDB entries in Species: African clawed frog (Xenopus laevis) [TaxId: 8355]:

  1. Domain(s) for 1cfc:
  2. Domain(s) for 1cfd:
  3. Domain(s) for 1cff:
    • 2323845Domain d1cffa_: 1cff A: [17295]
      complex with a binding peptide of the human Ca2+-pump
      complexed with ca
  4. Domain(s) for 1ckk:
    • 2323837Domain d1ckka_: 1ckk A: [17294]
      complex with a fragment of the rat ca2+/calmodulin dependent protein kinase
      complexed with ca
  5. Domain(s) for 1dmo:
  6. Domain(s) for 1f70:
  7. Domain(s) for 1f71:
  8. Domain(s) for 1iq5:
    • 2323781Domain d1iq5a_: 1iq5 A: [62643]
      complex with a ca2+/calmodulin dependent kinase kinase fragment
      complexed with ca
  9. Domain(s) for 1mux:
  10. Domain(s) for 1nwd:
    • 2323831Domain d1nwda_: 1nwd A: [86297]
      complex with the C-terminal fragment of glutamate decarboxylase, chains B and C
      complexed with ca
  11. Domain(s) for 1sy9:
  12. Domain(s) for 1y0v:
    1. 2323839Domain d1y0vh1: 1y0v H:5-148 [145893]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    2. 2323840Domain d1y0vi1: 1y0v I:5-148 [145894]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    3. 2323841Domain d1y0vj1: 1y0v J:5-148 [145895]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    4. 2323842Domain d1y0vk1: 1y0v K:5-148 [145896]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    5. 2323843Domain d1y0vl1: 1y0v L:5-148 [145897]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
    6. 2323844Domain d1y0vm1: 1y0v M:5-148 [145898]
      Other proteins in same PDB: d1y0vh2, d1y0vi2, d1y0vj2, d1y0vk2, d1y0vl2, d1y0vm2
      automatically matched to d2bbma_
      complexed with ca, mg, pop
  13. Domain(s) for 2eqc:
  14. Domain(s) for 2k3s:
  15. Domain(s) for 2kdu:
  16. Domain(s) for 2mes:
  17. Domain(s) for 2rrt:
  18. Domain(s) for 5t0x:
  19. Domain(s) for 5v02:
  20. Domain(s) for 5v03:
  21. Domain(s) for 6b8l:
    1. 2323802Domain d6b8lb_: 6b8l B: [349590]
      automated match to d1iq5a_
      complexed with so4
    2. 2323803Domain d6b8ld_: 6b8l D: [349525]
      automated match to d1iq5a_
      complexed with so4
    3. 2323804Domain d6b8lf_: 6b8l F: [349558]
      automated match to d1iq5a_
      complexed with so4
    4. 2323805Domain d6b8lh_: 6b8l H: [349521]
      automated match to d1iq5a_
      complexed with so4
  22. Domain(s) for 6b8m:
    1. 2323798Domain d6b8mb_: 6b8m B: [349517]
      automated match to d1iq5a_
      complexed with ca, so4
    2. 2323799Domain d6b8md_: 6b8m D: [349532]
      automated match to d1iq5a_
      complexed with ca, so4
    3. 2323800Domain d6b8mf_: 6b8m F: [349973]
      automated match to d1iq5a_
      complexed with ca, so4
    4. 2323801Domain d6b8mh_: 6b8m H: [349692]
      automated match to d1iq5a_
      complexed with ca, so4
  23. Domain(s) for 6b8n:
    1. 2323794Domain d6b8nb_: 6b8n B: [349516]
      automated match to d1iq5a_
      complexed with ca, so4
    2. 2323795Domain d6b8nd_: 6b8n D: [349582]
      automated match to d1iq5a_
      complexed with ca, so4
    3. 2323796Domain d6b8nf_: 6b8n F: [349602]
      automated match to d1iq5a_
      complexed with ca, so4
    4. 2323797Domain d6b8nh_: 6b8n H: [349623]
      automated match to d1iq5a_
      complexed with ca, so4
  24. Domain(s) for 6b8p:
    1. 2323790Domain d6b8pb_: 6b8p B: [349990]
      automated match to d1iq5a_
      complexed with mg, so4
    2. 2323791Domain d6b8pd_: 6b8p D: [349559]
      automated match to d1iq5a_
      complexed with mg, so4
    3. 2323792Domain d6b8pf_: 6b8p F: [349526]
      automated match to d1iq5a_
      complexed with mg, so4
    4. 2323793Domain d6b8ph_: 6b8p H: [349583]
      automated match to d1iq5a_
      complexed with mg, so4
  25. Domain(s) for 6b8q:
    1. 2323816Domain d6b8qb_: 6b8q B: [349651]
      automated match to d1iq5a_
      complexed with mg
    2. 2323817Domain d6b8qf_: 6b8q F: [349494]
      automated match to d1iq5a_
      complexed with mg
    3. 2323818Domain d6b8qh_: 6b8q H: [349505]
      automated match to d1iq5a_
      complexed with mg
  26. Domain(s) for 6ctb:
  27. Domain(s) for 6k4k:
    1. 2323820Domain d6k4kc_: 6k4k C: [371906]
      automated match to d1iq5a_
      complexed with ca
    2. 2323821Domain d6k4kd_: 6k4k D: [371901]
      automated match to d1iq5a_
      complexed with ca
  28. Domain(s) for 6mba:
  29. Domain(s) for 6mud:
  30. Domain(s) for 6paw:
  31. Domain(s) for 6u39:
    1. 2323806Domain d6u39a_: 6u39 A: [381159]
      automated match to d1dmoa_
      complexed with ca
    2. 2323807Domain d6u39c_: 6u39 C: [381186]
      automated match to d1dmoa_
      complexed with ca
    3. 2323808Domain d6u39e_: 6u39 E: [381185]
      automated match to d1dmoa_
      complexed with ca
    4. 2323809Domain d6u39g_: 6u39 G: [381154]
      automated match to d1dmoa_
      complexed with ca
    5. 2323810Domain d6u39i_: 6u39 I: [381157]
      automated match to d1dmoa_
      complexed with ca
    6. 2323811Domain d6u39k_: 6u39 K: [381160]
      automated match to d1dmoa_
      complexed with ca
    7. 2323812Domain d6u39m_: 6u39 M: [381161]
      automated match to d1dmoa_
      complexed with ca
    8. 2323813Domain d6u39o_: 6u39 O: [381248]
      automated match to d1dmoa_
      complexed with ca
    9. 2323814Domain d6u39q_: 6u39 Q: [381250]
      automated match to d1dmoa_
      complexed with ca
    10. 2323815Domain d6u39s_: 6u39 S: [381190]
      automated match to d1dmoa_
      complexed with ca
  32. Domain(s) for 6y4o:
  33. Domain(s) for 7byl:
    1. 2323786Domain d7bylb_: 7byl B: [394387]
      automated match to d1iq5a_
      complexed with k, pt5
    2. 2323787Domain d7byld_: 7byl D: [394420]
      automated match to d1iq5a_
      complexed with k, pt5
    3. 2323788Domain d7bylf_: 7byl F: [394406]
      automated match to d1iq5a_
      complexed with k, pt5
    4. 2323789Domain d7bylh_: 7byl H: [394464]
      automated match to d1iq5a_
      complexed with k, pt5
  34. Domain(s) for 7kl5:

More info for Species African clawed frog (Xenopus laevis) [TaxId:8355] from a.39.1.5 Calmodulin

Timeline for Species African clawed frog (Xenopus laevis) [TaxId:8355] from a.39.1.5 Calmodulin: